Factsheet for AT3G59140.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71911	Canola	plasma membrane	74.19	92.93
CDY06021	Canola	plasma membrane	74.05	92.44
Bra007434.1-P	Field mustard	golgi, plasma membrane, plastid	89.61	89.73
KRG91620	Soybean	plasma membrane	63.11	73.95
Zm00001d045279_P001	Maize	plasma membrane	21.4	67.9
VIT_16s0050g02480.t01	Wine grape	plasma membrane	68.89	67.64
PGSC0003DMT400023487	Potato	plasma membrane	67.38	66.78
KRH35194	Soybean	endoplasmic reticulum, nucleus, plasma membrane	67.58	66.4
Solyc03g007530.2.1	Tomato	plasma membrane	67.03	66.39
TraesCS7D01G114300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	46.87	66.05
Solyc06g036490.1.1	Tomato	plastid	53.27	64.88
KRH08764	Soybean	plasma membrane	66.07	64.82
TraesCS7A01G119800.1	Wheat	plasma membrane	37.99	64.41
VIT_16s0050g02280.t01	Wine grape	cytosol, golgi, plasma membrane	56.92	63.37
TraesCSU01G159700.1	Wheat	cytosol, peroxisome, plasma membrane	54.85	62.76
TraesCS7A01G119500.1	Wheat	cytosol, peroxisome, plasma membrane	54.58	62.44
TraesCS2B01G529000.2	Wheat	plasma membrane	55.54	62.36
GSMUA_Achr10P...	Banana	plasma membrane	52.31	62.3
TraesCS7D01G115900.1	Wheat	plasma membrane	55.06	61.92
PGSC0003DMT400074333	Potato	mitochondrion	65.11	61.27
KRH08755	Soybean	plasma membrane	63.04	60.94
VIT_02s0025g00930.t01	Wine grape	plasma membrane	58.16	60.23
GSMUA_Achr6P31980_001	Banana	plasma membrane	52.79	59.92
OQU80926	Sorghum	plasma membrane	61.05	59.85
Os06t0158900-00	Rice	plasma membrane	61.05	59.81
TraesCSU01G093100.1	Wheat	plasma membrane	60.84	59.69
TraesCS4A01G227600.1	Wheat	cytosol, golgi, mitochondrion, plasma membrane	47.76	59.57
TraesCS7D01G116300.2	Wheat	plasma membrane	60.7	59.55
Zm00001d031447_P003	Maize	plastid	61.18	59.43
TraesCS7B01G016500.1	Wheat	plasma membrane	60.56	59.42
KXG19351	Sorghum	plasma membrane	60.5	59.23
Zm00001d045269_P004	Maize	plasma membrane	60.08	58.99
HORVU7Hr1G024960.12	Barley	golgi	59.81	58.52
KXG25638	Sorghum	plasma membrane	58.84	58.32
TraesCS7A01G118900.2	Wheat	plasma membrane	59.19	58.07
VIT_02s0025g00950.t01	Wine grape	plasma membrane	58.84	57.85
VIT_02s0025g00970.t01	Wine grape	plasma membrane	59.12	57.65
TraesCS2B01G150600.1	Wheat	plasma membrane	58.57	56.7
TraesCS2D01G131000.1	Wheat	plastid	58.36	56.57
TraesCS7A01G119000.1	Wheat	plasma membrane	58.22	56.44
TraesCS2A01G128500.1	Wheat	plasma membrane	57.88	56.25
PGSC0003DMT400018927	Potato	plasma membrane	48.38	55.66
HORVU2Hr1G022560.5	Barley	mitochondrion	58.16	55.12
Solyc08g081890.2.1	Tomato	endoplasmic reticulum, nucleus, plasma membrane	54.37	53.41
AT3G60970.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	32.42	44.73
AT3G21250.4	Thale cress	plasma membrane	42.53	42.04
AT1G04120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	40.81	39.17
AT3G60160.1	Thale cress	plasma membrane	39.37	37.98
AT3G13080.1	Thale cress	plasma membrane, plastid	39.44	37.85
AT3G13100.1	Thale cress	plasma membrane	38.68	37.64
AT2G47800.1	Thale cress	plasma membrane	37.65	36.08
AT3G62700.1	Thale cress	plasma membrane	36.75	34.7
AT1G30420.1	Thale cress	plasma membrane	30.08	29.23
AT1G30410.1	Thale cress	plasma membrane	29.87	28.97
AT2G34660.1	Thale cress	plasma membrane	31.87	28.53
AT2G07680.3	Thale cress	plasma membrane	27.94	28.47

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	EntrezGene:825083	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AEE79882.1	ArrayExpress:AT3G59140	EnsemblPlantsGene:AT3G59140
RefSeq:AT3G59140	TAIR:AT3G59140	RefSeq:AT3G59140-TAIR-G	EnsemblPlants:AT3G59140.1	TAIR:AT3G59140.1	Symbol:ATMRP14
Unigene:At.34659	ProteinID:CAB86942.1	GO:GO:0000166	GO:GO:0000325	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150
GO:GO:0008559	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0042908	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	RefSeq:NP_191473.2
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007098	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0025022
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24223	PANTHER:PTHR24223:SF192	UniProt:Q9LYS2
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0000163733	SEG:seg

Description

ABCC10ABC transporter C family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYS2]

Coordinates

chr3:-:21863348..21869036

Molecular Weight (calculated)

162822.0 Da

IEP (calculated)

7.850

GRAVY (calculated)

0.164

Length

1453 amino acids

Sequence
(BLAST)

0001: MIENYWTSFC GNHHTSSNCT VRFLQICFGI TLSFLTLCIC LFHKEPPKRI HQFFCLRLVS ALFNGIIGSL DLVLGIWVLR ENHSKPLILW LVILIQGFTW
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.