Factsheet for PGSC0003DMT400074333

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g036490.1.1	Tomato	plastid	70.92	91.79
PGSC0003DMT400023487	Potato	plasma membrane	74.55	78.51
KRG91620	Soybean	plasma membrane	59.2	73.71
VIT_16s0050g02480.t01	Wine grape	plasma membrane	67.94	70.88
CDY06021	Canola	plasma membrane	53.24	70.62
CDX71911	Canola	plasma membrane	52.98	70.52
KRH35194	Soybean	endoplasmic reticulum, nucleus, plasma membrane	66.52	69.44
KRH08764	Soybean	plasma membrane	63.28	65.97
TraesCS7D01G114300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	43.98	65.86
AT3G59140.1	Thale cress	plasma membrane	61.27	65.11
VIT_16s0050g02280.t01	Wine grape	cytosol, golgi, plasma membrane	54.86	64.9
Bra007434.1-P	Field mustard	golgi, plasma membrane, plastid	60.88	64.78
KRH08755	Soybean	plasma membrane	62.05	63.74
GSMUA_Achr10P...	Banana	plasma membrane	50.06	63.36
TraesCS7A01G119800.1	Wheat	plasma membrane	35.17	63.36
TraesCS2B01G529000.2	Wheat	plasma membrane	52.98	63.21
TraesCSU01G159700.1	Wheat	cytosol, peroxisome, plasma membrane	51.94	63.15
TraesCS7A01G119500.1	Wheat	cytosol, peroxisome, plasma membrane	51.68	62.83
Zm00001d045279_P001	Maize	plasma membrane	18.52	62.45
TraesCS7D01G115900.1	Wheat	plasma membrane	52.01	62.15
Os06t0158900-00	Rice	plasma membrane	58.42	60.82
OQU80926	Sorghum	plasma membrane	58.29	60.73
TraesCS7D01G116300.2	Wheat	plasma membrane	58.1	60.57
TraesCS7B01G016500.1	Wheat	plasma membrane	58.03	60.5
TraesCSU01G093100.1	Wheat	plasma membrane	57.97	60.43
GSMUA_Achr6P31980_001	Banana	plasma membrane	50.06	60.39
TraesCS4A01G227600.1	Wheat	cytosol, golgi, mitochondrion, plasma membrane	45.47	60.26
KXG19351	Sorghum	plasma membrane	57.71	60.04
HORVU7Hr1G024960.12	Barley	golgi	57.32	59.6
Zm00001d045269_P004	Maize	plasma membrane	56.67	59.12
KXG25638	Sorghum	plasma membrane	55.96	58.94
Zm00001d031447_P003	Maize	plastid	57.06	58.89
TraesCS7A01G118900.2	Wheat	plasma membrane	56.35	58.74
PGSC0003DMT400018927	Potato	plasma membrane	47.93	58.59
TraesCS2A01G128500.1	Wheat	plasma membrane	56.28	58.13
TraesCS2D01G131000.1	Wheat	plastid	56.09	57.77
TraesCS2B01G150600.1	Wheat	plasma membrane	56.15	57.76
HORVU2Hr1G022560.5	Barley	mitochondrion	56.48	56.88
TraesCS7A01G119000.1	Wheat	plasma membrane	55.18	56.84
PGSC0003DMT400011214	Potato	cytosol	5.83	54.22
PGSC0003DMT400080270	Potato	mitochondrion	32.32	43.5
PGSC0003DMT400057099	Potato	endoplasmic reticulum, plasma membrane	36.66	42.88
PGSC0003DMT400083884	Potato	plasma membrane	38.28	40.53
PGSC0003DMT400022108	Potato	plastid	38.41	38.73
PGSC0003DMT400016069	Potato	endoplasmic reticulum, plasma membrane	34.26	38.56
PGSC0003DMT400045009	Potato	cytosol, peroxisome, plasma membrane	31.15	38.24
PGSC0003DMT400056413	Potato	mitochondrion	33.48	37.01
PGSC0003DMT400044938	Potato	plasma membrane	33.23	35.23
PGSC0003DMT400029581	Potato	plasma membrane	34.33	34.69

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	UniProt:M1CTI7	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
EnsemblPlantsGene:PGSC0003DMG400028893	PGSC:PGSC0003DMG400028893	EnsemblPlants:PGSC0003DMT400074333	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24223	PANTHER:PTHR24223:SF192	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix
UniParc:UPI000294F233	SEG:seg	:	:	:	:

Description

Multidrug resistance-associated protein 1, 3 (Mrp1, 3), abc-transoprter [Source:PGSC_GENE;Acc:PGSC0003DMG400028893]

Coordinates

chr6:-:38028582..38036304

Molecular Weight (calculated)

173199.0 Da

IEP (calculated)

9.017

GRAVY (calculated)

0.172

Length

1544 amino acids

Sequence
(BLAST)

0001: MKKYRSVKNA SRKQIHIGKS KAHYCMIFCK KHPKHRQSSG VCSVCLTEKL SPLSTSNTGT VTCWIHHRMA SLLKGIREKE LDKEMKDLWT VFCGAPGCSD
0101: NNGKLCHTDF GSMTDPSSCI NHVLIICFDV ILLLVFLFNL FSKASIRATN IPAHFHGFSR LQLISAIFNG FLGLLYLAFG IWILEDKVMK THSSLPLHWW
0201: LLIMFHGTTW LLVSCTTSLR GKYFSKTPLR LLSILAFIFA GVSCGFSLFA AVFVKRASLK IALDILSSLG ACLLLLCTYK ELKQEDVIGN DLYAPLNGIS
0301: KSNSVSCITQ FAKAGILSKM SFWWLNSLMK KGKKKTLEDE DIPRLCEADR AESCYLIFEE LLNKQKQVDP TSQPSVLKTI FICHRKEIIV TGFFALLKVV
0401: TVSAGPLLLN AFIKVAEGNA SFRNEGLFLA ILLFTSKSLE SVAQRQWYFR CRLIGLKVRS LLTAAIYRKQ IKLSNAAKLM HSSGEIMNYV TVDAYRIGEF
0501: PFWLHQTWTT TVQLCLVLII LFHTVGVATI ASLVVIILTV LCNTPLAKLQ HKFQTKLLVA QDDRLKAISE ALVSMKVLRL YAWEAHFKNV IQILRQVEEK
0601: WLSAVQLRRS YNSFLFWSSP VLVSAATFVT CYFLGIPLNA SNVFTFVATL RLVQDPIRTI PDVIGVVIQA KVSFERIVKF LEASELEMRR ECIRSTDHAV
0701: LIKSANLSWE ESPSRPTLRN INLEVKPGEK IAICGEVGSG KSSLLSAILG EVPSIQGTVQ VYGTTAYVSQ SAWIQTGTIR ENILFGSPLD SQRYQQTLEK
0801: CSLLKDLEIL PYGDLTEIGE RGVNLSGGQK QRIQLARALY HDADIYLLDD PFSAVDAHTS TSLFNEYIMG ALSRKTILLV THQVDFLPAF NMVLLMSDGE
0901: ILRSASYDQL LASSKEFQNL VNAHKETAGS ERVSEAFYSP RSDTCSREIK NKDSGKQPKT SGGDQLIKQE EREVGDTGFK SYVQYLNQNK GYLFFAIAVV
1001: SQLAFVAGQI LQNSWMAANV ENPEVSTLRL ISVYLLIGFV STLFLLSRSL STVLLGLQSS KSLFSQLLNS LFRAPMSFYD STPLGRILSR VSSDLSIVDL
1101: DVPFYLIFAV ASTTNFYSNL TVLGVVTWQV LFVSIPMVYV AILLQRYYFA SAKELMRING TTKSFVANHL AESIAGAVTI RAFKEEERFF VKTFELIDIN
1201: ASPFFHNFAA NEWLIQRLET ISATVLASSA LCMVLLPPGT FSSGTLINSL YAWNWKEKRI FLFSLPLCTL VNYIISVERL NQYMHIPSEA PEILEESRPP
1301: VNWPSRGKVE IQDLQIRYRK DSRLVLRGIS CTFEGGHKVG IVGRTASGKS TLISALFRLV EPAGGRIVVD GVDICKIGLH DLRSRFGVIP QDPTLFNGTV
1401: RCNLDPLCQH TDHEIWEWIF IDHGLISVVE DGLNWSMGQR QLFCLGRALL RKSKILVLDE ATASIDNATD MILQKTIREE FANCTVITVA HRIPTVMDCT
1501: MVLAISDGKL VEYDKPMKLM KNEGSLFRKL VKEYWSHYHS AKSH

Best Arabidopsis Sequence Match ( AT3G59140.1 )
(BLAST)

0001: MIENYWTSFC GNHHTSSNCT VRFLQICFGI TLSFLTLCIC LFHKEPPKRI HQFFCLRLVS ALFNGIIGSL DLVLGIWVLR ENHSKPLILW LVILIQGFTW
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR

Arabidopsis Description

ABCC10ABC transporter C family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYS2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.