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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 3
  • plasma membrane 5
  • extracellular 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
mitochondrion: 24351685
msms PMID: 24351685 doi
F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller
Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400011214 Potato cytosol 11.24 94.58
PGSC0003DMT400080270 Potato mitochondrion 70.01 85.27
Solyc10g024420.1.1 Tomato golgi, nucleus, plasma membrane 89.48 84.63
VIT_15s0021g00220.t01 Wine grape plasma membrane 71.44 66.09
AT3G60970.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 48.75 64.67
KRH48930 Soybean endoplasmic reticulum 67.79 63.01
KRH66359 Soybean plasma membrane 65.78 60.38
Bra003402.1-P Field mustard plastid 62.92 58.84
AT3G60160.1 Thale cress plasma membrane 63.14 58.57
CDX98408 Canola plasma membrane 54.55 58.03
CDY64080 Canola plasma membrane 54.26 57.82
Zm00001d026041_P005 Maize plasma membrane 54.19 56.66
TraesCS2B01G473000.1 Wheat endoplasmic reticulum 58.12 54.17
Zm00001d002503_P001 Maize plasma membrane 59.63 54.09
TraesCS2A01G451500.1 Wheat plasma membrane 59.34 53.94
HORVU2Hr1G105430.1 Barley cytosol, peroxisome, plasma membrane 59.13 53.71
KXG26126 Sorghum plasma membrane 55.98 52.55
KXG27008 Sorghum plasma membrane 59.77 52.35
TraesCS2A01G451300.1 Wheat plastid 59.13 52.08
TraesCS2D01G451100.2 Wheat cytosol 59.06 50.74
Os04t0588700-01 Rice cytosol, plasma membrane 47.82 50.11
PGSC0003DMT400057099 Potato endoplasmic reticulum, plasma membrane 47.1 49.85
TraesCS2B01G472800.1 Wheat cytosol, peroxisome, plasma membrane 58.91 49.55
PGSC0003DMT400022108 Potato plastid 47.24 43.11
PGSC0003DMT400045009 Potato cytosol, peroxisome, plasma membrane 38.44 42.69
PGSC0003DMT400044938 Potato plasma membrane 40.37 38.74
PGSC0003DMT400016069 Potato endoplasmic reticulum, plasma membrane 36.29 36.95
PGSC0003DMT400018927 Potato plasma membrane 32.28 35.71
PGSC0003DMT400023487 Potato plasma membrane 37.29 35.54
PGSC0003DMT400029581 Potato plasma membrane 37.37 34.16
PGSC0003DMT400083884 Potato plasma membrane 35.15 33.68
PGSC0003DMT400074333 Potato mitochondrion 37.01 33.48
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640UniProt:M1BZF0InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664
EnsemblPlantsGene:PGSC0003DMG400021922PGSC:PGSC0003DMG400021922EnsemblPlants:PGSC0003DMT400056413ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24223PANTHER:PTHR24223:SF165SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelix
UniParc:UPI000296800ESEG:seg::::
Description
Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter [Source:PGSC_GENE;Acc:PGSC0003DMG400021922]
Coordinates
chr10:+:37199393..37206254
Molecular Weight (calculated)
156472.0 Da
IEP (calculated)
7.010
GRAVY (calculated)
0.155
Length
1397 amino acids
Sequence
(BLAST)
0001: MADINFPELK IVWLQPLWRC LWEDASIIVL LGFLSILLLD SLLRKGREKA MTVEKYVFGT KVGVSYIFSI ICTIILLSTH LIMLLMLQER NGAHYQFKFP
0101: ILSSEILQIT SWAGSFTVLY TTQNKKCIKF PWVLRIWWIS SFFLSLARAT LDAHFVITSD EHLGLAEYVD ILSLIASTCL LVISIRGKTG IIFDISDSTT
0201: KPLLNGKREK HSEAKRDSLY GKASLLQLIT FSWLNPLFEI GIKKPIDRDE VPDVDFRDSA KFLSDSFDES LKYVKERDGT RNPSIYKAIY LFGRKKAAIN
0301: AIFAVISAGS SYVGPYLIDD FVNFLSKKKF RGLQSGYFLA LAFLGAKMVE TIAQRQWIFG ARQLGLRVRG ALISHIYQKG LLLSSQSRQS YTSREIINYM
0401: SVDVQRITEF IWYLNSIWML PIQISLSIYI LHMNLGMGAV VALGATLILM TGNIPLIRIL KGYQTKIMES KDERMKSTSE ILRNIKTIKL QAWDNYYLQK
0501: LEILRKVEYN WLWKSLRLSA LTTFIFWGSP IFISVATFSG CVMMGIPLTA GRVLSAFATF RMLQDPIFNL PDLLSAIAQG KVSADRIAYY LQEDEIQPDA
0601: LEFVPKDETQ FGVEIKSGTF SWDTESGIPT LDGIELQAKR GMRVAICGTV GSGKSSLLSC VLGEMQKQSG IVKISGEVAY VPQSPWILTG NIKENVLFGK
0701: PYESVKYDTT VETCALKKDF ELFPAGDLTE IGERGINMSG GQKQRIQIAR AVYQDADIYL LDDPFSALDA HTGTHLFQEC LMRVLKDKTI LYVTHQVEFL
0801: PAADLILVMQ NGRIAQAGTF EELLKQNIGF EVLVGAHNQA LESVLTVESS SRVSEHAVTD GDLDTDSNVN AEFPHTKQDS ENNLLIEITE KDGRLVQDEE
0901: REKGSIGKEV YISYLTIVKG GAFIPIILLA QSSFQLLQIA SNYWMAWSCP TGDTAPIAEK MNFILFVYVL LAVGSSLCVL VRSSFLAIVG LRTAEKLFSN
1001: MLHSILRAPL SFFDSTPTGR ILNRASTDQS VLDLKMANKL GLCAFSIIQL LGTIAVMSQA AWEVFVIFIP VTAVCIWYQV SIAGLAVTYG INLNVLQASV
1101: IWNICYAENK MISVERILQY SNLASEAPLV IQNSRPSITW PETGTISFQN LQIRYAEHLP FVLKNITCTL PGSKKFGVVG RTGSGKSTLI QALFRVIEPR
1201: EESIIIDDVD ICKIGLHDLR SRLSIIPQDP TMFEGTVRGN LDPLAQHSDT EIWEALDKCQ LGDIVRAKPE KLEYTVVENG ENWSVGQRQL FCLGRALLKK
1301: SSILVLDEAT ASVDAATDAV LQKIISQEFK NQTVVTIAHR IHTVIDSDFV LVLNEGKIAE YDTPAKLLER EDSLFSKLIK EYSMRSKKFN SLAILQT
Best Arabidopsis Sequence Match ( AT3G60160.1 )
(BLAST)
0001: MFKPFGFAAE TGSHLLTTQW LQLGNSLCLK ERISIAMQVT FLAFFLIHLA LKWFGVVRNR GSNDVEEDLK KQSITVKQSF SYNISLLCSV SILGTHCFIL
0101: LLLFRDSVVS RCDSSVSVFS AEVSQSFSWL FVSVVVVKIR ERRLVKFPWM LRSWWLCSFI LSFSFDAHFI TAKHEPLEFQ DYADLTGLLA SLFLLAVSIR
0201: GKTGFHLLES SGNTEPLLLG DQTEQNKKDS YSSSSPYGNA TLFQRITFSW INPLFSLGYK RPLEKDDVPD IDVKDSARFC SHAFDQKLKT TKEKEGPGNA
0301: FFYNSVLRYV WRKAAINAVF AVVNASTAYI GPYLINDFVE FLSEKQSQSL NHGYLLALGF LTAKIVETVT QRQWIFGARQ LGLRLRAALI SHIYQKGLVL
0401: SSQSRQSHTS GEIINYMSVD VQRITDFIWY VNNIWMLPIQ IFSAIYILQK HLGLGALAAL VTTLMVMACN YPLTRLQRNY QSDIMNAKDD RMKATSEILK
0501: NMKILKLQAW DNQFLNKVKT LRKKEYDCLW KSLRLQAFTT FILWGAPSLI SVVTFVTCML MGVKLTAGAV LSALATFQML QSPIFGLPDL LSALVQSKVS
0601: ADRIASYLQQ SETQKDAVEY CSKDHTELSV EIENGAFSWE PESSRPTLDD IELKVKSGMK VAVCGAVGSG KSSLLSSILG EIQKLKGTVR VSGKQAYVPQ
0701: SPWILSGTIR DNILFGSMYE SEKYERTVKA CALIKDFELF SNGDLTEIGE RGINMSGGQK QRIQIARAVY QNADIYLLDD PFSAVDAHTG RELFEDCLMG
0801: ILKDKTVLYV THQVEFLPAA DLILVMQNGR VMQAGKFEEL LKQNIGFEVL VGAHNEALDS ILSIEKSSRN FKEGSKDDTA SIAESLQTHC DSEHNISTEN
0901: KKKEAKLVQD EETEKGVIGK EVYLAYLTTV KGGLLVPFII LAQSCFQMLQ IASNYWMAWT APPTAESIPK LGMGRILLVY ALLAAGSSLC VLARTILVAI
1001: GGLSTAETFF SRMLCSIFRA PMSFFDSTPT GRILNRASTD QSVLDLEMAV KLGWCAFSII QIVGTIFVMS QVAWQVCVIF IPVAVACVFY QRYYTPTARE
1101: LSRMSGVERA PILHHFAESL AGATTIRAFD QRDRFISSNL VLIDSHSRPW FHVASAMEWL SFRLNLLSHF VFAFSLVLLV TLPEGVINPS IAGLGVTYGL
1201: SLNVLQATVI WNICNAENKM ISVERILQYS KIPSEAPLVI DGHRPLDNWP NVGSIVFRDL QVRYAEHFPA VLKNITCEFP GGKKIGVVGR TGSGKSTLIQ
1301: ALFRIVEPSQ GTIVIDNVDI TKIGLHDLRS RLGIIPQDPA LFDGTIRLNL DPLAQYTDHE IWEAIDKCQL GDVIRAKDER LDATVVENGE NWSVGQRQLV
1401: CLGRVLLKKS NILVLDEATA SVDSATDGVI QKIINQEFKD RTVVTIAHRI HTVIESDLVL VLSDGRIAEF DSPAKLLQRE DSFFSKLIKE YSLRSNHFAG
1501: SNDLLS
Arabidopsis Description
ABCC9ABC transporter C family member 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.