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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98408 Canola plasma membrane 96.87 96.73
AT3G60970.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 72.62 90.41
Bra003402.1-P Field mustard plastid 99.92 87.68
PGSC0003DMT400011214 Potato cytosol 9.99 78.92
AT3G60160.1 Thale cress plasma membrane 89.78 78.15
PGSC0003DMT400080270 Potato mitochondrion 57.21 65.39
CDY71198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.8 61.66
CDX82557 Canola plasma membrane 23.49 61.35
CDY51899 Canola endoplasmic reticulum, plasma membrane, vacuole 24.64 59.38
VIT_15s0021g00220.t01 Wine grape plasma membrane 67.51 58.61
KRH48930 Soybean endoplasmic reticulum 64.07 55.89
PGSC0003DMT400056413 Potato mitochondrion 57.82 54.26
Solyc10g024420.1.1 Tomato golgi, nucleus, plasma membrane 60.11 53.35
KRH66359 Soybean plasma membrane 61.94 53.35
CDY39771 Canola endoplasmic reticulum, plasma membrane, vacuole 43.25 52.99
Zm00001d002503_P001 Maize plasma membrane 59.65 50.78
TraesCS2B01G473000.1 Wheat endoplasmic reticulum 58.05 50.77
HORVU2Hr1G105430.1 Barley cytosol, peroxisome, plasma membrane 59.12 50.39
TraesCS2A01G451500.1 Wheat plasma membrane 58.43 49.84
KXG26126 Sorghum plasma membrane 56.29 49.6
KXG27008 Sorghum plasma membrane 59.73 49.09
CDX82552 Canola plasma membrane 46.07 49.07
TraesCS2A01G451300.1 Wheat plastid 58.81 48.61
Os04t0588700-01 Rice cytosol, plasma membrane 49.28 48.46
TraesCS2D01G451100.2 Wheat cytosol 59.19 47.72
Zm00001d026041_P005 Maize plasma membrane 48.36 47.46
TraesCS2B01G472800.1 Wheat cytosol, peroxisome, plasma membrane 59.27 46.78
CDY63884 Canola plasma membrane 43.78 46.63
CDX89842 Canola plasma membrane 48.28 41.98
CDY18207 Canola plasma membrane 48.28 41.95
CDY43395 Canola plasma membrane 46.76 41.84
CDY03309 Canola golgi 45.54 41.6
CDX71911 Canola plasma membrane 36.16 40.86
CDY06021 Canola plasma membrane 36.23 40.81
CDY23680 Canola plasma membrane 36.92 36.09
CDY27531 Canola plasma membrane 38.6 35.63
CDY37305 Canola plasma membrane 38.44 35.49
CDY44021 Canola plastid 46.61 35.26
CDY06441 Canola plasma membrane 39.36 35.22
CDY23565 Canola plastid 46.45 35.06
CDY43277 Canola plastid 39.28 34.38
CDY72149 Canola cytosol, peroxisome, plasma membrane 15.79 33.82
CDY11440 Canola plastid 38.29 33.8
CDX93660 Canola plastid 39.13 33.79
CDX76656 Canola plasma membrane, plastid 38.06 33.74
CDY09589 Canola plasma membrane 31.12 27.33
CDX98202 Canola plasma membrane 30.28 27.21
CDY09591 Canola plasma membrane 33.26 26.85
CDY02289 Canola plasma membrane 33.18 26.8
CDY12054 Canola plasma membrane 32.88 26.56
CDY31633 Canola plasma membrane 32.8 26.45
CDX90247 Canola plasma membrane 32.72 26.42
CDX84290 Canola plasma membrane 32.8 26.4
CDY01519 Canola plasma membrane 28.38 26.0
CDY02290 Canola plasma membrane 31.2 25.33
CDX77595 Canola extracellular 0.99 6.47
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300GO:A0A078JCI9UniProt:A0A078JCI9InterPro:AAA+_ATPase
InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY64080ProteinID:CDY64080
ProteinID:CDY64080.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00040861001InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF165SMART:SM00382SUPFAM:SSF52540
SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0004EE815DSEG:seg::
Description
BnaAnng19200DBnaAnng19200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCI9]
Coordinates
chrLK034397:+:16920..22948
Molecular Weight (calculated)
146634.0 Da
IEP (calculated)
7.971
GRAVY (calculated)
0.100
Length
1311 amino acids
Sequence
(BLAST)
0001: MGLTQWLQLN SPCMKEHISI TMQLAFLAFF VIHFAWKRLG AVRNRGVHDT EEDLKKQSIT VKQSFSYKLS LLCSVSIFGT HCFVLLLLLQ NSVVPRCDSS
0101: VSVFSTEISQ ALSWLIVSLY VIKIKERRLL EFPWMLRSWW LCSFILSLTF TAHFITAKHH KPLGFKDYAD LTSLVASLFL VSLSIRGNTG LHLLESTEEV
0201: TEPLLLCSET EQIKKKTSSF SPYGNATLFQ RITFSWINPL FSLGYKKPLE KDDVPNIDVK DSAQTCSQAF DKNLKTTIEQ EGPGRAFFYK SHLGLGAVAA
0301: LVTTLMVMAC NYPLTRIQRT YQSDIMNAKD ERMKATSEIL KNMKILKLQA WDNQFLNKVK RLRKKEYDCL WKSLRLQAFT TFILWGAPAL ISVVTFVTCM
0401: LIGVKLTSGA VLSALATFQM LQSPIFGLPD LLSALVQSKV SADRIASYLQ QSETQKDAVE YLSKDDTELS VEIENGAFSW EPEASRPTLD EIELRVKTGM
0501: KVAICGAVGS GKSSLLSSIL GEIQKLRGTV RVSGKQAYVP QSPWILTGTI RDNILFGSIY ESEKYERTVK ACALIKDFEL FSNGDMTEIG ERGINMSGGQ
0601: KQRIQIARAV YQDADVYLLD DPFSAVDAHT GRQLFEECLM GILKEKTVLY VTHQVEFLPA ADLILVMQNG RVMQAGEFQE LLKQNIGFEV LTQRDSEHNI
0701: STENKKKEAK LVQDEETEKG VIGKEVYLAY LRTVKGGLLV PIIILAQSCF QMLQIASNYW MAWTAPPTAE SKPKMSMDKI LLVYTLLAAG SSLCVLARTI
0801: LVAIGGLSTA EKFFSRMLCS IFRAPMSFFD STPTGRILNR VSTDQSVLDL EMAIKLGWCA FSIIQIVGTI FVMSQVAWQV CVIFIPVAVA CVFYQRYYTP
0901: TARELSRMSG VERAPILHHF AESLAGATTI RAFDQRDRFI SSNLTLIDNH SRPWFHVASA MEWLSFRLNL LSHFVFAFSL VLLVTLPEGV INPSIAGLGV
1001: TYGLSLNVLQ ATVIWNICNA ENKMISVERI LQYSKIPSEA PLVVDAHKPL DNWPNVGSIV FRDLQVRYAE HFPAVLKNIT CEFPGGKKIG VVGRTGSGKS
1101: TLIQALFRIV EPSQGTIVID NVDITKIGLH DLRSRLGIIP QDPALFDGTV RVNLDPLAQY TDQELWEALD KCQLGDVLRA KEEKLNATVV ENGDNWSVGQ
1201: RQLVCLGRVL LKKSNILVLD EATASVDSAT DGVIQKIITQ EFKDRTVVTI AHRIHTVIES DLVLVLSDAG RIAEFDSPAK LLEREDSFFS KLIKEYSMRS
1301: KHFTGSNNLL S
Best Arabidopsis Sequence Match ( AT3G60970.1 )
(BLAST)
0001: MSVDVQRITD FIWYVNSIWM LPIQIFSAIY ILQKHLGLGA LAALVTTLMV MACNYPLTRL QRNYQSDIMN AKDDRMKATS EILKNMKILK LQAWDNQFLN
0101: KVKTLRKKEY DCLWKSLRLQ DFTTFILWGA PSLISVVTFV TCMLMGVKLT AGAVLSALAT FQMLQSPIFG LPDLLSALVQ SKVSADRIAS YLQQSETQKD
0201: AVEYCSNDHT EFSVEIENGA FSWEPESSRP TLDDIELKVK SGMKVAICGA VGSGKSSLPS SILGEIQKLK GTVRVSGKQA YVPQSPWILS GTIRDNILFG
0301: SIYESEKYER TVKACALIKD FELFSNGDLT EIGERGINMS GGQKQRIQIA RAVYQNADIY LLDDPFSAVD AHTGRELFED CLMGILKDKT VLYVTHQVEF
0401: LPAADLILVM QNGRVMQAGK FEELLKQNIG FEVLTQCDSE HNISTENKKK EAKLVQDEET EKGVIGKEVY LTYLTTVKGG LLVPFIILAQ SCFQMLQIAS
0501: NYWMAWTAPP TAESIPKLGM GRILLVYALL AAGSSLCVLA RTILVAIGGL STAETFFSRM LCSIFRAPMS YFDSTPTGRI LNRASTDQSV LDLEMAVKLG
0601: WCAFSIIQIV GTIFVMSQVA WQVCVIFIPV AVACVFYQRY YTPTERELSR MSGVERAPIL HHFAESLAGA TTIRAFDQRD RFISSNLVLI DSHSRPWFHV
0701: ASAMEWLSFR LNLLSHFVFA FSLVLLVTLP EGVINPSIAG LGVTYGLSLN VLQATVIWNI CNAENKMISV ERILQHSKIP SEAPLVIDDQ RPLDNWPNVG
0801: SIVFRDLQVR YAEHFPAVLK NITCAFPGGK KIGVVGRTGS GKSTLIQALF RIVEPSHGTI VIDNVDITKI GLHDLRSRLG IIPQDNALFD GTIRLNLDPL
0901: AQYTDREIWE ALDKCQLGDV IRAKDEKLDA TVVENGENWS VGQRQLVCLG RVLLKKSNIL VLDEATASVD SATDGVIQKI INQEFKDRTV VTIAHRIHTV
1001: IESDLVLVLS DGRIAEFDSP AKLLQREDSF FSKLIKEYSL RSNHFAGSND LLS
Arabidopsis Description
ABCC15Putative ABC transporter C family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q7FB56]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.