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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 40.86 99.41
CDY51899 Canola endoplasmic reticulum, plasma membrane, vacuole 42.89 97.06
CDX82557 Canola plasma membrane 39.56 97.01
Bra001490.1-P Field mustard plasma membrane 99.35 82.69
AT3G13080.1 Thale cress plasma membrane, plastid 92.69 75.36
KRH73882 Soybean plasma membrane 76.12 72.52
KXG31741 Sorghum plasma membrane 70.59 69.35
PGSC0003DMT400057099 Potato endoplasmic reticulum, plasma membrane 73.6 68.64
Zm00001d048327_P001 Maize cytosol 2.19 65.85
VIT_19s0015g00040.t01 Wine grape plasma membrane 56.54 64.56
KRG98556 Soybean nucleus 68.16 64.49
TraesCS1A01G310100.1 Wheat cytosol 39.32 64.19
KRG99624 Soybean plasma membrane 76.69 63.44
KRH46626 Soybean plasma membrane 74.74 62.97
KRH01233 Soybean cytosol, endoplasmic reticulum, plasma membrane 66.69 62.86
KRH14256 Soybean plasma membrane 75.71 62.38
KRH73881 Soybean plasma membrane 75.47 62.22
OQU92792 Sorghum plasma membrane 68.81 61.78
HORVU3Hr1G024210.3 Barley vacuole 70.02 60.53
GSMUA_Achr10P... Banana plasma membrane 62.63 60.14
KRH46325 Soybean plasma membrane 72.46 59.63
TraesCS1D01G309600.1 Wheat peroxisome 62.14 59.58
TraesCS1B01G321200.1 Wheat peroxisome 62.06 59.5
Os02t0288400-00 Rice plasma membrane 61.98 59.33
KRH73880 Soybean plasma membrane 58.81 59.01
KRH46324 Soybean plasma membrane 71.73 58.75
TraesCS2D01G420400.1 Wheat plasma membrane 60.76 58.3
TraesCS3D01G129900.2 Wheat plasma membrane 70.67 58.12
TraesCS3A01G129000.1 Wheat plastid 70.59 58.09
TraesCS3B01G148100.2 Wheat plasma membrane, plastid 70.51 57.87
Zm00001d008733_P001 Maize plasma membrane 70.27 57.74
TraesCS4B01G253200.1 Wheat plasma membrane 69.46 57.69
CDY63884 Canola plasma membrane 57.68 57.68
TraesCS2B01G442400.1 Wheat plasma membrane 58.98 57.53
TraesCS4D01G253300.3 Wheat plasma membrane 69.13 57.34
Os01t0173900-01 Rice plasma membrane 70.11 57.34
TraesCS4A01G051100.1 Wheat plasma membrane 69.21 57.26
CDY43395 Canola plasma membrane 67.99 57.13
CDY39771 Canola endoplasmic reticulum, plasma membrane, vacuole 49.15 56.54
Zm00001d020666_P004 Maize plasma membrane 60.2 56.26
TraesCS3D01G356300.2 Wheat plasma membrane 66.69 55.81
TraesCS3B01G395000.2 Wheat plasma membrane 66.13 55.45
HORVU3Hr1G085890.7 Barley plasma membrane 66.13 55.41
KXG40096 Sorghum plasma membrane 67.91 55.33
Zm00001d048329_P003 Maize plasma membrane 66.69 54.05
TraesCS3A01G362500.1 Wheat plasma membrane 62.96 53.78
CDY44021 Canola plastid 69.54 49.39
CDY23565 Canola plastid 69.37 49.17
CDX98408 Canola plasma membrane 49.23 46.15
CDY64080 Canola plasma membrane 49.07 46.07
CDX89842 Canola plasma membrane 55.4 45.23
CDY18207 Canola plasma membrane 55.4 45.2
CDX71911 Canola plasma membrane 42.49 45.09
CDY06021 Canola plasma membrane 42.49 44.93
CDY03309 Canola golgi 52.32 44.88
CDY23680 Canola plasma membrane 44.76 41.09
CDY37305 Canola plasma membrane 44.44 38.52
CDY27531 Canola plasma membrane 44.27 38.38
CDY06441 Canola plasma membrane 44.27 37.2
CDX76656 Canola plasma membrane, plastid 44.6 37.12
CDY43277 Canola plastid 45.17 37.12
CDY11440 Canola plastid 44.35 36.77
CDX93660 Canola plastid 45.09 36.56
CDY72149 Canola cytosol, peroxisome, plasma membrane 15.52 31.21
CDY01519 Canola plasma membrane 32.74 28.16
CDY09589 Canola plasma membrane 32.66 26.93
CDX98202 Canola plasma membrane 31.76 26.8
CDY09591 Canola plasma membrane 35.17 26.66
CDX84290 Canola plasma membrane 35.26 26.64
CDY31633 Canola plasma membrane 35.17 26.63
CDY12054 Canola plasma membrane 35.09 26.62
CDY02289 Canola plasma membrane 35.01 26.56
CDX90247 Canola plasma membrane 34.93 26.48
CDY02290 Canola plasma membrane 32.74 24.95
CDX77595 Canola extracellular 0.0 0.0
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300GO:A0A078D0B4InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDX82552ProteinID:CDX82552ProteinID:CDX82552.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00137719001InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893
PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF181SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0004EF2BA4SEG:seg:::
Description
BnaA03g32690D
Coordinates
chrLK031828:-:1885260..1890028
Molecular Weight (calculated)
136368.0 Da
IEP (calculated)
6.045
GRAVY (calculated)
0.120
Length
1231 amino acids
Sequence
(BLAST)
0001: MGPLIEIGNK KPLDLEDVPQ LHDSDSVVGL APKFRTMLES SSDGGGGVTT FKLMKALFFS AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN
0101: NEGYVLVITF FLAKLVECLS QRHWFFRLQK VGIRMRSSLV AMIYEKGLTL SCHSKQGRTS GEIINFMTVD AERIALWILY RNLGLASIAA LIATILVMLV
0201: NFPFGRMQER FQEKLMEAKD NRMKSTSEIL RNMRILKLQG WEMKFLSKIF DLRKSEEGWL KKYVYNSAVI SFVFWGAPTL VSVSTFGACI LLGIPLESGK
0301: ILSALATFRI LQEPIYNLPD TISMVVQTKV SLDRIASYLC LDNLQPDVVE TLPQGGSDIA VEVSNSTLSW DVSSESPTLK DINFKVLPGM KVAVCGTVGS
0401: GKSSLLSSIL GEVPKVSGSL KVCGTKAYVA QSPWIQSGKI EDNILFGKPM ERERYEKVLE ACSLSKDLEI LSFGDQTVIG ERGINLSGGQ KQRIQIARAL
0501: YQDADIYLFD DPFSAVDAHT GSHLFKEVLL GLLSSKSVIY VTHQVEFLPA ADLILVMKDG RISQAGKYND ILSSGTDFME LIGAHQEALA VVGSVDASSV
0601: SEKPALGGQE DAIGLDGKQE SQDVKNDKPD TEETKRQLVQ EEEREKGSVA LDVYWKYITL AYGGALVPFI VLAQVLFQLL QIGSNYWMAW ATPVSKDVEA
0701: PVNISTLMIV YVALAVGSSL CILVRATLLV TAGYKTATEL FHKMHHCIFR SPMSFFDSTP SGRIMNRAST DQSAVDLDIP YQFGSVAITV IQLIGIIGVM
0801: SQVSWLVFLV FIPVVAASIW YQRYYIAAAR ELSRLVGVCK APLIQHFAET ISGSTTIRSF NQESRFRGDN MRLSDGYSRP KFYSAGAMEW LCFRLDMLSS
0901: LTFAFSLVFL ISIPTGVIDP SLAGLAVTYG LSLNTLQAWL IWTLCNLENK IISVERILQY ASVPSEPPLV IESNRPQQSW PSRGEVDIHD LQVRYAPHMP
1001: LVLRGITCTF KGGLRTGIVG RTGSGKSTLI QTLFRIVEPS AGEIKIDGVN ILNIGLHDLR LRLSIIPQDP TMFEGTVRSN LDPLEEYTDD QIWEALDKCQ
1101: LGDEVRKKDL KLDSSVSENG ENWSMGQRQL VCLGRVLLKR SKILVLDEAT ASVDTATDNL IQKTLREHFS DCTVITIAHR ISSVIDSDMV LLLSNGIIEE
1201: YDSPVKLLEN KSSSFAKLVA EYTARSSSSF D
Best Arabidopsis Sequence Match ( AT3G13080.1 )
(BLAST)
0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQRYYIA AARELSRLVG VCKAPLIQHF SETISGATTI RSFSQEFRFR SDNMRLSDGY SRPKFYTAGA MEWLCFRLDM LSSLTFVFSL VFLVSIPTGV
1201: IDPSLAGLAV TYGLSLNTLQ AWLIWTLCNL ENKIISVERI LQYASVPSEP PLVIESNRPE QSWPSRGEVE IRDLQVRYAP HMPLVLRGIT CTFKGGLRTG
1301: IVGRTGSGKS TLIQTLFRIV EPSAGEIRID GVNILTIGLH DLRLRLSIIP QDPTMFEGTM RSNLDPLEEY TDDQIWEALD KCQLGDEVRK KEQKLDSSVS
1401: ENGDNWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS DMVLLLSNGI IEEYDTPVRL LEDKSSSFSK
1501: LVAEYTSRSS SSFD
Arabidopsis Description
ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.