Factsheet for TraesCS4B01G253200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G253300.3	Wheat	plasma membrane	96.96	96.83
TraesCS4A01G051100.1	Wheat	plasma membrane	97.1	96.71
TraesCS3B01G148100.2	Wheat	plasma membrane, plastid	92.51	91.4
KXG31741	Sorghum	plasma membrane	72.47	85.71
Os01t0173900-01	Rice	plasma membrane	82.66	81.4
OQU92792	Sorghum	plasma membrane	74.56	80.6
Zm00001d008733_P001	Maize	plasma membrane	80.5	79.64
Zm00001d048327_P001	Maize	cytosol	2.16	78.05
TraesCS3B01G395000.2	Wheat	plasma membrane	76.99	77.72
KXG40096	Sorghum	plasma membrane	76.59	75.12
Zm00001d048329_P003	Maize	plasma membrane	74.7	72.88
CDY71198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	24.7	72.33
CDX82557	Canola	plasma membrane	24.43	72.11
CDY51899	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.25	71.51
CDX82552	Canola	plasma membrane	57.69	69.46
KRH73882	Soybean	plasma membrane	58.64	67.26
PGSC0003DMT400057099	Potato	endoplasmic reticulum, plasma membrane	58.3	65.45
GSMUA_Achr10P...	Banana	plasma membrane	56.21	64.98
TraesCS1B01G321200.1	Wheat	peroxisome	55.13	63.63
VIT_19s0015g00040.t01	Wine grape	plasma membrane	45.88	63.08
KRG99624	Soybean	plasma membrane	62.21	61.96
KRG98556	Soybean	nucleus	54.32	61.88
Bra001490.1-P	Field mustard	plasma membrane	61.61	61.73
TraesCS2B01G442400.1	Wheat	plasma membrane	52.23	61.33
Bra001488.1-P	Field mustard	plasma membrane, plastid	61.67	61.22
KRH46626	Soybean	plasma membrane	60.32	61.19
AT3G13080.1	Thale cress	plasma membrane, plastid	62.42	61.1
KRH73881	Soybean	plasma membrane	61.47	61.02
KRH14256	Soybean	plasma membrane	61.47	60.98
Bra039368.1-P	Field mustard	plasma membrane	59.92	60.12
KRH01233	Soybean	cytosol, endoplasmic reticulum, plasma membrane	51.96	58.96
KRH46325	Soybean	plasma membrane	59.24	58.69
KRH46324	Soybean	plasma membrane	59.04	58.22
KRH73880	Soybean	plasma membrane	47.64	57.54
Bra034706.1-P	Field mustard	plasma membrane	55.53	55.87
AT3G13100.1	Thale cress	plasma membrane	56.07	55.66
CDY43395	Canola	plasma membrane	54.86	55.49
CDY63884	Canola	plasma membrane	46.09	55.48
Bra039348.1-P	Field mustard	plasma membrane	54.32	55.02
TraesCS4B01G343800.2	Wheat	plasma membrane	48.11	47.38
TraesCS2B01G473000.1	Wheat	endoplasmic reticulum	45.82	45.3
CDY44021	Canola	plastid	52.56	44.95
CDY23565	Canola	plastid	52.5	44.79
TraesCS3B01G425500.1	Wheat	cytosol, peroxisome, plasma membrane	43.05	43.61
TraesCS2B01G472800.1	Wheat	cytosol, peroxisome, plasma membrane	46.9	41.84
TraesCS2B01G529000.2	Wheat	plasma membrane	36.1	41.34
TraesCS7B01G269700.1	Wheat	cytosol, golgi, plasma membrane	38.87	39.1
TraesCS5B01G479900.1	Wheat	golgi	39.74	39.08
TraesCS7B01G016500.1	Wheat	plasma membrane	38.93	38.96
TraesCS2B01G069000.2	Wheat	plastid	39.81	38.54
TraesCS2B01G150600.1	Wheat	plasma membrane	38.46	37.97
TraesCS7B01G052900.1	Wheat	plasma membrane	27.06	27.52

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24223	PANTHER:PTHR24223:SF181	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G253200	EnsemblPlants:TraesCS4B01G253200.1	TIGR:cd03244	TIGR:cd03250
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:519046283..519051734

Molecular Weight (calculated)

162588.0 Da

IEP (calculated)

6.482

GRAVY (calculated)

0.210

Length

1482 amino acids

Sequence
(BLAST)

0001: MPTAAAMAGQ KQPALPLFLR PLLLHGVGAG AHLLLALSVA ARLLFASGRR GKDTAAPGIR FRWGQVAVRA TWALAASELF LAAYSLVSWY LDNSGGDGGA
0101: EVADQADAAA RAVAWLLLAA YLQLEYRGRG EERFPAPLRL WWGLFLLLSV LAVAVHAATS LCYRLPVPAL PWARDAVEVI AAVALLVAGS SARRAATTAG
0201: SASEEPLLNG ARDDTVDASL FTSAGFLSVL TFSWMSPLIA VGHRKTLGLD DVPDLDHGDS VAGLLPSFKT NLEALAGDGS GPKFTAFKLT RALVRTVWWH
0301: IAVTALYALI YNLATYVGPY LIDSLVQYLN GDERYAGKGK LLVVTFIVAK VFECLSQRHW FFRLQQAGIR ARSALVSVVY QKGLSLSSSS RQSCTSGEMI
0401: NIISVDADRV GLFSWYMHDP WLVPLQVGLA LFILYSTLGV ASLAALGATI AVMLANVPPM KMQEKFQQKL MDCKDVRMKA TSEILRNMRI LKLQGWEMKF
0501: LSKISDLRTT ETSWLKKYLY TWTAATFVFW GAPTFVAVAT FGACMLLGIP LESGKVLSAL ATFRVLQEPI YNLPDTISMM IQTKVSLDRI ASFLCLEEFP
0601: TDAVERLPSG SSNVAIEVSN GCFSWDGSPE LPTLKDLNFQ ARQGMRVAVC GTVGSGKSSL LSCILGEVPK LSGEVKTCGT MAYVSQTAWI QSGKIQDNIL
0701: FGKEMDSEKY DRVLEWCSLK KDLEILPFGD KTFIGERGIN LSGGQKQRIQ IARALYQDAD IYVFDDPFSA VDAHTGSHLF KECLLGALAS KTVVYVTHQI
0801: EFLPAADLIL VMKDGRIAQA GKYNEILGSG EELMELVGAH QHALTALDVI DVANGGSEKL SSSLSRSLSS AEEKDKQNGK EDGDKVQSGQ LVQEEEREKG
0901: RVGFWVYWKY LTLAYGGALV PFVLIAQLLF QVLQIASNYW MAWASPVSED AEPPVSMSTL IYVFVALAVA SSLCILVRAL LVVTAAYKTA TLLFNKMHMA
1001: IFRAPMSFFD STPSGRILNR ASTDQSEVDT YIANQMGYVA FSIIQLVGII VVMSQVAWQV FVVFVPVIII FLCYQRYYIE TARELQRLVG VCKAPIIQHF
1101: AESISGSTTI RSFGKENQFV LTNSHLIDAD SRPKFYNAAA MEWLCFRLDT LSSFTFAFAL IFLISLPTGI IDPGIAGLAV TYGLNLNTLQ AWVVRSMCNL
1201: ENKIVSVERI LQYISIPEEP PLSTSGDKLP HNWPSEGEIR LRNLHVRYAP QLPFVLKGLS VTFPGGMKTG IVGRTDSGKS TLIQALFRIV EPTVGQILVD
1301: GVDICTIGLH DLRSRLSIIP QDPTMFEGTV RSNLDPLNEY NDDQIWESLD NCQLGDEVRR KELKLDSPVI ENGENWSVGQ RQLVCLGRVI LKQTKILVLD
1401: EATASVDTAT DNMIQRTLRE NFSEATVITI AHRITSVLDS DMVLLLDDGV AVERDSPAKL LENKSSLFSK LVAEYTMRAT HS

Best Arabidopsis Sequence Match ( AT3G13080.1 )
(BLAST)

0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQRYYIA AARELSRLVG VCKAPLIQHF SETISGATTI RSFSQEFRFR SDNMRLSDGY SRPKFYTAGA MEWLCFRLDM LSSLTFVFSL VFLVSIPTGV
1201: IDPSLAGLAV TYGLSLNTLQ AWLIWTLCNL ENKIISVERI LQYASVPSEP PLVIESNRPE QSWPSRGEVE IRDLQVRYAP HMPLVLRGIT CTFKGGLRTG
1301: IVGRTGSGKS TLIQTLFRIV EPSAGEIRID GVNILTIGLH DLRLRLSIIP QDPTMFEGTM RSNLDPLEEY TDDQIWEALD KCQLGDEVRK KEQKLDSSVS
1401: ENGDNWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS DMVLLLSNGI IEEYDTPVRL LEDKSSSFSK
1501: LVAEYTSRSS SSFD

Arabidopsis Description

ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.