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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048327_P001 Maize cytosol 2.45 90.24
Zm00001d048329_P003 Maize plasma membrane 89.48 89.01
OQU92792 Sorghum plasma membrane 78.42 86.43
KXG31741 Sorghum plasma membrane 70.09 84.52
Os01t0173900-01 Rice plasma membrane 78.76 79.07
HORVU3Hr1G024210.3 Barley vacuole 74.19 78.72
TraesCS4B01G253200.1 Wheat plasma membrane 75.12 76.59
TraesCS4D01G253300.3 Wheat plasma membrane 75.18 76.55
TraesCS4A01G051100.1 Wheat plasma membrane 75.05 76.21
TraesCS3A01G129000.1 Wheat plastid 75.31 76.07
TraesCS3D01G356300.2 Wheat plasma membrane 73.79 75.8
TraesCS3D01G129900.2 Wheat plasma membrane 75.05 75.75
TraesCS3B01G395000.2 Wheat plasma membrane 73.46 75.61
TraesCS3B01G148100.2 Wheat plasma membrane, plastid 74.98 75.53
HORVU3Hr1G085890.7 Barley plasma membrane 73.26 75.36
TraesCS3A01G362500.1 Wheat plasma membrane 71.01 74.46
CDY71198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.55 73.32
CDX82557 Canola plasma membrane 24.22 72.91
CDY51899 Canola endoplasmic reticulum, plasma membrane, vacuole 26.08 72.43
CDX82552 Canola plasma membrane 55.33 67.91
KRH73882 Soybean plasma membrane 56.45 66.02
PGSC0003DMT400057099 Potato endoplasmic reticulum, plasma membrane 56.06 64.17
GSMUA_Achr10P... Banana plasma membrane 54.33 64.04
VIT_19s0015g00040.t01 Wine grape plasma membrane 43.55 61.04
KRG99624 Soybean plasma membrane 59.96 60.89
KRH14256 Soybean plasma membrane 60.03 60.71
Bra001490.1-P Field mustard plasma membrane 59.1 60.38
Bra001488.1-P Field mustard plasma membrane, plastid 59.56 60.28
KRH73881 Soybean plasma membrane 59.36 60.08
KRH46626 Soybean plasma membrane 58.04 60.03
KRG98556 Soybean nucleus 51.42 59.72
AT3G13080.1 Thale cress plasma membrane, plastid 59.23 59.11
Bra039368.1-P Field mustard plasma membrane 57.05 58.36
KRH01233 Soybean cytosol, endoplasmic reticulum, plasma membrane 49.97 57.81
KRH73880 Soybean plasma membrane 46.92 57.78
KRH46325 Soybean plasma membrane 57.18 57.75
KRH46324 Soybean plasma membrane 56.59 56.89
CDY63884 Canola plasma membrane 45.67 56.05
Bra034706.1-P Field mustard plasma membrane 53.87 55.26
AT3G13100.1 Thale cress plasma membrane 54.14 54.79
CDY43395 Canola plasma membrane 52.75 54.4
Bra039348.1-P Field mustard plasma membrane 52.28 54.0
OQU93255 Sorghum plasma membrane 47.52 47.49
KXG26126 Sorghum plasma membrane 44.8 45.5
CDY44021 Canola plastid 51.36 44.78
OQU86956 Sorghum plasma membrane 42.55 44.47
CDY23565 Canola plastid 51.09 44.44
EES17847 Sorghum endoplasmic reticulum, plasma membrane, vacuole 37.66 43.37
KXG27008 Sorghum plasma membrane 45.53 43.13
KXG20196 Sorghum plasma membrane 39.58 39.95
OQU80926 Sorghum plasma membrane 37.66 38.39
KXG32483 Sorghum plasma membrane 37.99 37.96
KXG19351 Sorghum plasma membrane 37.13 37.8
KXG25638 Sorghum plasma membrane 36.53 37.65
EES10452 Sorghum plastid 37.99 37.06
EER89345 Sorghum plasma membrane 26.8 27.65
EES12878 Sorghum plasma membrane 29.72 27.6
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300UniProt:A0A1B6QQ96InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640EnsemblPlants:KXG40096ProteinID:KXG40096ProteinID:KXG40096.1
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24223PANTHER:PTHR24223:SF181SMART:SM00382EnsemblPlantsGene:SORBI_3001G491200SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI00081ADE0ESEG:seg:::
Description
hypothetical protein
Coordinates
chr1:-:76097084..76103065
Molecular Weight (calculated)
166086.0 Da
IEP (calculated)
6.324
GRAVY (calculated)
0.139
Length
1511 amino acids
Sequence
(BLAST)
0001: METTPDWDWE ECLIFFLHGV SAASHLILAL AVTGRLLLRR LSAGRTKDGE VGGGDASRSL GRFPYCYRVS VCTTWALAAF EVLLAAYSWY ADGGAGWSGD
0101: AVAERVDAAA RAVSWLLLAA YLQFDVGRRR RQERFPAPLR IWWALFTLLT VVAAGVHAAT SLDGFPVPGR SWALDAISVT AAVVLLSAGF LGRKEGNGRG
0201: HASEEQEPLL NGAHGAADDD DENSSSSAAD ASLFTGAGFL SVLTFSWMGP LLRVGHRKTL ALEDVPGLEP GDSVAGILPP FKANLEALTR DVNSDGGRSS
0301: KKVVTAFTLT KALLRTIWWH VAVTAFYTLV YCVAAYVGPY LIDSLVQYLY LSGDERYAGK GQLLVLAFVV AKVLECLSQR HLFFRLQQAG IRARSALVAV
0401: VYQKSLALSS QSRRSRTSGE MINIVSVDAD RVGIFSWYLH EVWQVPLQTG MAMFILYSTL GLASLAALAA TVAISLATVP LGRMQERFQE KLMDSKDARM
0501: KATSESLHSM RILKLQGWEM RFLSKVIDLR KTEANWLKRY LYTSATMTFV FWGTPTFVAV VTFGACMLMG IPLETGKLLS ALATFRVLQE PIYELPGTIA
0601: MVIKTKVSLA RIASFLCLDE LPSDAVQRLP RGSSEDFAIS VSNGCFSWEA SPEFPTLKDL SFQARPGMRV AVCGTVGSGK SSLLSCILGE IPKLSGEVRT
0701: CGTTAYVSQS AWIQSGKIQE NILFGKEMDT EKYDRVLESC ALKKDLEILP FGDQTVIGER GINLSGGQKQ RIQIARALYQ DADIYLFDDP FSAVDAHTGS
0801: HLFKECLLAD LASKTVVYVT HQIEFLPAAE LILVMKDGRI AQAGKYDEIL GSGEELMELV GAHKESLTAL DVIDGMNEDN ASSSSPSGRE KQNLSRSLSL
0901: AEKKHEANDD EGNDAQSGQL VQEEEREKGR VGFWVYWKYL TLAYKGALVP LVLLAQMLFQ VIQIASNYWM AWAAPVSKDV EPPVSMPTLL SVYVMLALGS
1001: SLCILVRSLL LATAGYKTAT LLFNKMHFSI FRAPMSFFDS TPSGRILNRA STDQSEVDTN IADQMGTVAF SMIQLVGIIV VMSQVAWQVF VVFIPVFAAC
1101: VWYQQYYIDT ARELQRLVGV CYAPIIQHFA ESIAGSSTIR SFGKENQFVT TNSRLTDAYS RPKFYNAGAR EWLCFRLDVL SSLVFAFSLI FLINLPTGLI
1201: DPGIAGLAIT YGLSLNTLQA QVVWSMCTLE NKIISVERIL QYISIPTEPP LVMSENKLAH NWPSNGEIQL HNLHVKYAPQ LPFVLKGLTV TFPGGMKTGI
1301: VGRTGSGKST LIQSLFRIVD PTVGQILIDG VDICTIGLHD LRSRLSIIPQ EPTMFEGTVR SNLDPLGEYS DDQIWEALDC CQLGDEVRKQ ELKLDSPVIE
1401: NGENWSVGQR QLVCLGRVIL KRSKVLVLDE ATASVDTATD NLIQRTLRQQ FKETTVITIA HRISSVLDSD MVLLLDNGVA VEHDRPNKLL EDKSSLFSKL
1501: VAEYTMRAAH T
Best Arabidopsis Sequence Match ( AT3G13080.1 )
(BLAST)
0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQRYYIA AARELSRLVG VCKAPLIQHF SETISGATTI RSFSQEFRFR SDNMRLSDGY SRPKFYTAGA MEWLCFRLDM LSSLTFVFSL VFLVSIPTGV
1201: IDPSLAGLAV TYGLSLNTLQ AWLIWTLCNL ENKIISVERI LQYASVPSEP PLVIESNRPE QSWPSRGEVE IRDLQVRYAP HMPLVLRGIT CTFKGGLRTG
1301: IVGRTGSGKS TLIQTLFRIV EPSAGEIRID GVNILTIGLH DLRLRLSIIP QDPTMFEGTM RSNLDPLEEY TDDQIWEALD KCQLGDEVRK KEQKLDSSVS
1401: ENGDNWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS DMVLLLSNGI IEEYDTPVRL LEDKSSSFSK
1501: LVAEYTSRSS SSFD
Arabidopsis Description
ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.