Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 94.22 93.48
CDY51899 Canola endoplasmic reticulum, plasma membrane, vacuole 96.02 88.6
Zm00001d048327_P001 Maize cytosol 5.38 65.85
TraesCS1A01G310100.1 Wheat cytosol 59.56 39.66
CDX82552 Canola plasma membrane 97.01 39.56
Bra001488.1-P Field mustard plasma membrane, plastid 99.8 33.56
AT3G13080.1 Thale cress plasma membrane, plastid 93.63 31.04
KRH73882 Soybean plasma membrane 79.68 30.96
CDY63884 Canola plasma membrane 74.5 30.38
KXG31741 Sorghum plasma membrane 74.7 29.93
PGSC0003DMT400057099 Potato endoplasmic reticulum, plasma membrane 77.69 29.55
GSMUA_Achr10P... Banana plasma membrane 74.5 29.17
CDY39771 Canola endoplasmic reticulum, plasma membrane, vacuole 61.35 28.79
KRG98556 Soybean nucleus 71.31 27.52
KRH46626 Soybean plasma membrane 79.48 27.31
KRG99624 Soybean plasma membrane 80.68 27.22
KRH01233 Soybean cytosol, endoplasmic reticulum, plasma membrane 70.52 27.11
OQU92792 Sorghum plasma membrane 73.11 26.77
KRH14256 Soybean plasma membrane 78.69 26.44
KRH73881 Soybean plasma membrane 78.49 26.39
HORVU3Hr1G024210.3 Barley vacuole 73.51 25.91
TraesCS1D01G309600.1 Wheat peroxisome 65.54 25.62
KRH46325 Soybean plasma membrane 76.29 25.6
KRH46324 Soybean plasma membrane 76.49 25.55
TraesCS2D01G420400.1 Wheat plasma membrane 65.14 25.49
TraesCS1B01G321200.1 Wheat peroxisome 64.74 25.31
Os02t0288400-00 Rice plasma membrane 64.54 25.19
CDY43395 Canola plasma membrane 73.11 25.05
Zm00001d008733_P001 Maize plasma membrane 74.3 24.9
TraesCS3B01G148100.2 Wheat plasma membrane, plastid 73.9 24.73
TraesCS3A01G129000.1 Wheat plastid 73.51 24.67
TraesCS3D01G129900.2 Wheat plasma membrane 73.51 24.65
Zm00001d020666_P004 Maize plasma membrane 64.34 24.53
CDY72149 Canola cytosol, peroxisome, plasma membrane 29.88 24.51
Os01t0173900-01 Rice plasma membrane 73.31 24.45
TraesCS3A01G362500.1 Wheat plasma membrane 70.12 24.43
TraesCS4B01G253200.1 Wheat plasma membrane 72.11 24.43
TraesCS4D01G253300.3 Wheat plasma membrane 72.11 24.39
KXG40096 Sorghum plasma membrane 72.91 24.22
TraesCS4A01G051100.1 Wheat plasma membrane 71.71 24.19
TraesCS2B01G442400.1 Wheat plasma membrane 60.56 24.09
TraesCS3D01G356300.2 Wheat plasma membrane 70.12 23.93
TraesCS3B01G395000.2 Wheat plasma membrane 69.72 23.84
HORVU3Hr1G085890.7 Barley plasma membrane 69.72 23.83
Zm00001d048329_P003 Maize plasma membrane 71.71 23.7
CDX98408 Canola plasma membrane 61.55 23.53
CDY64080 Canola plasma membrane 61.35 23.49
CDY23565 Canola plastid 77.09 22.28
CDY44021 Canola plastid 76.69 22.22
CDX71911 Canola plasma membrane 48.41 20.95
CDY06021 Canola plasma membrane 48.01 20.7
CDX89842 Canola plasma membrane 61.75 20.56
CDY18207 Canola plasma membrane 61.75 20.54
CDY03309 Canola golgi 54.18 18.95
CDY23680 Canola plasma membrane 50.6 18.94
CDY37305 Canola plasma membrane 51.59 18.24
CDY27531 Canola plasma membrane 51.59 18.24
CDY06441 Canola plasma membrane 50.8 17.41
CDX76656 Canola plasma membrane, plastid 51.2 17.38
CDY11440 Canola plastid 51.0 17.24
CDY43277 Canola plastid 50.8 17.02
CDX93660 Canola plastid 50.6 16.73
KRH73880 Soybean plasma membrane 40.44 16.54
VIT_19s0015g00040.t01 Wine grape plasma membrane 34.06 15.86
CDX98202 Canola plasma membrane 38.45 13.23
CDY09589 Canola plasma membrane 38.84 13.06
CDX84290 Canola plasma membrane 42.03 12.95
CDY31633 Canola plasma membrane 41.83 12.92
CDY01519 Canola plasma membrane 36.45 12.79
CDY12054 Canola plasma membrane 41.24 12.75
CDX90247 Canola plasma membrane 41.04 12.68
CDY02289 Canola plasma membrane 40.84 12.63
CDY09591 Canola plasma membrane 40.84 12.62
CDY02290 Canola plasma membrane 39.04 12.14
CDX77595 Canola extracellular 0.0 0.0
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300GO:A0A078D0B8InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeEnsemblPlants:CDX82557ProteinID:CDX82557ProteinID:CDX82557.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00137724001InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223
PANTHER:PTHR24223:SF181SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0004EE20CB
Description
BnaA03g32640D
Coordinates
chrLK031828:+:1899530..1902742
Molecular Weight (calculated)
55972.7 Da
IEP (calculated)
5.340
GRAVY (calculated)
0.111
Length
502 amino acids
Sequence
(BLAST)
001: MAWATPLSKD VEAPMHHCIF RSPMSFFDST PSGRIMNRAS TDQSAVDLII PYEFGAVAIT VIQLIGIIGV MSQVSWLVFL VFIPVVAASI WYQRYYIAAA
101: RELSRLVGVC KAPLIQHFAE TISGSTTIRS FNQESRFRGD NMRLSDDFSR PKFYLAGAME WLCFRLDMLS SLTFAFSLVF LISIPTGVID PSLAGLAVTY
201: GLNLNTLQAW LIWTLCNLEN KIISVERMLQ YASVPSEPPL VIESNRPEQS WPSLGEVDIH DLQVRYAPHM PLVLRGITCT FKGGLRTGIV GRTGSGKSTL
301: IQTLFRIVEP SAGEIRIDGV NILTIGLHDL RLRLSIIPQD PTMFEGTVRS NLDPLEEYTD DQIWEALDKC QLGDEVRKKD LKLDSSVSEN GENWSMGQRQ
401: LVCLGRVLLK RSKILVLDEA TASVDTATDN LIQKTLREHF SDCTVITIAH RISSVIDSDM VLLLSNGIIE EYDSPVKLLE NKSSSFAKLV AEYTSRSSSS
501: FE
Best Arabidopsis Sequence Match ( AT3G13080.1 )
(BLAST)
0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQRYYIA AARELSRLVG VCKAPLIQHF SETISGATTI RSFSQEFRFR SDNMRLSDGY SRPKFYTAGA MEWLCFRLDM LSSLTFVFSL VFLVSIPTGV
1201: IDPSLAGLAV TYGLSLNTLQ AWLIWTLCNL ENKIISVERI LQYASVPSEP PLVIESNRPE QSWPSRGEVE IRDLQVRYAP HMPLVLRGIT CTFKGGLRTG
1301: IVGRTGSGKS TLIQTLFRIV EPSAGEIRID GVNILTIGLH DLRLRLSIIP QDPTMFEGTM RSNLDPLEEY TDDQIWEALD KCQLGDEVRK KEQKLDSSVS
1401: ENGDNWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS DMVLLLSNGI IEEYDTPVRL LEDKSSSFSK
1501: LVAEYTSRSS SSFD
Arabidopsis Description
ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.