CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09589	Canola	plasma membrane	90.65	98.06
Bra032386.1-P	Field mustard	plasma membrane	87.31	97.65
CDY72149	Canola	cytosol, peroxisome, plasma membrane	32.57	85.95
AT1G30410.1	Thale cress	plasma membrane	79.32	85.51
AT1G30420.1	Thale cress	plasma membrane	77.59	83.81
CDX98202	Canola	plasma membrane	75.29	83.34
CDX77595	Canola	extracellular	9.16	73.63
VIT_10s0003g04470.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	66.94	66.56
CDY12054	Canola	plasma membrane	62.6	62.29
CDY31633	Canola	plasma membrane	62.66	62.24
CDX84290	Canola	plasma membrane	62.66	62.12
CDY02289	Canola	plasma membrane	62.23	61.92
CDX90247	Canola	plasma membrane	62.23	61.88
GSMUA_Achr8P33250_001	Banana	endoplasmic reticulum, golgi, plastid	48.85	61.83
CDY09591	Canola	plasma membrane	62.17	61.82
EES12878	Sorghum	plasma membrane	62.17	61.71
Zm00001d002275_P029	Maize	plasma membrane	61.67	61.14
Os04t0620000-01	Rice	plasma membrane	61.42	60.97
HORVU2Hr1G103620.1	Barley	plasma membrane	61.42	60.93
TraesCS1A01G404300.1	Wheat	plasma membrane	58.76	59.05
GSMUA_Achr7P03410_001	Banana	endoplasmic reticulum, plasma membrane, plastid	49.66	55.12
CDY71198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	12.26	39.13
CDX82557	Canola	plasma membrane	12.14	39.04
CDY51899	Canola	endoplasmic reticulum, plasma membrane, vacuole	12.38	36.76
CDY39771	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.41	35.33
CDX82552	Canola	plasma membrane	24.95	32.74
CDY06021	Canola	plasma membrane	23.53	32.65
CDX71911	Canola	plasma membrane	23.41	32.59
CDY63884	Canola	plasma membrane	24.58	32.25
CDY23680	Canola	plasma membrane	26.5	31.92
CDX98408	Canola	plasma membrane	25.39	31.23
CDY64080	Canola	plasma membrane	25.33	31.2
CDY43395	Canola	plasma membrane	27.74	30.58
CDX76656	Canola	plasma membrane, plastid	27.86	30.43
CDY11440	Canola	plastid	27.74	30.17
CDY18207	Canola	plasma membrane	28.17	30.15
CDY37305	Canola	plasma membrane	26.5	30.14
CDX89842	Canola	plasma membrane	28.11	30.11
CDY27531	Canola	plasma membrane	26.44	30.07
CDY03309	Canola	golgi	26.63	29.97
CDY43277	Canola	plastid	27.62	29.77
CDX93660	Canola	plastid	27.68	29.45
CDY06441	Canola	plasma membrane	26.38	29.08
CDY01519	Canola	plasma membrane	25.45	28.72
CDY44021	Canola	plastid	26.56	24.75
CDY23565	Canola	plastid	26.38	24.52

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	GO:A0A078EJP1	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY02290	ProteinID:CDY02290	ProteinID:CDY02290.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00113738001	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24223	PANTHER:PTHR24223:SF251	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0004EE067C	SEG:seg	:	:

Description

BnaA09g26120D

Coordinates

chrLK031933:+:127275..135913

Molecular Weight (calculated)

181407.0 Da

IEP (calculated)

7.622

GRAVY (calculated)

0.035

Length

1615 amino acids

Sequence
(BLAST)

0001: MGFEALAWYC KPVAQGFWEK TVDGAFGAYT PCVVNTLVML VSQIVLLGLC LYRIWIIFRN AKAQLYVLRN KYYNCVLGIL ACYCAAEPVL RLVMRISLFS
0101: MDEETYLPPF EVASLTVEAF AWLSMLSLVG LETKRYVKEF RWYVRFGVVY VLVADAVLLD LVLPLNNSLN RTALYLCISS RCAQVIFGVM LLVYIPELDP
0201: YHGYHTLNNE SLDNVEYDVL PEGENICPER RAGFFTGIFF DWITPLMQLG YRKTLNEKDV WQLDKWDQTE TLIKRFQRSW TEESRKNKPW LLRALNKSLG
0301: GRFWFGGIFK IGHDLSQFVG PLILSQLLRA MQEDDPAWVG YVYAFFIFVG VTLGVLCQSQ YFQHVGRAAF RLRSTMVAAV FHKSLRLTHE ARKNFTSGKV
0401: TNMITADASA LQLIVEQLHG LWSAPFRIIM SIILLYQQLG VASLFGSLIL FLLIPLQTLV INKMRKLTKE GLQWTDKRVG ITNEILASMD TVKCYAWEKS
0501: FESRIEGIRN EELSWFRKAQ LLSAFNSFIL NSTPVVVTVV SFGVFVLLGG DLTPARAFSS LSLFSVLRSP LNMLPNLLSQ AVNANVSLQR IEDLLLSEER
0601: VLAQNPPIQP GAPAISIKNG YFSWDSKTTK PTLSNINLEI PVGSLVAIVG GTGEGKTSLV SAMLGELSHG ETSNVVIRGS VAYVPQVSWI FNATVRENII
0701: FGSDFERERY WRAIDVTALK HDLDLLPGRD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VYIFDDPLSA LDAHVAQQVF DSCMKEELKG KTRILITNQL
0801: HLLPMMDRII LVSEGMIKEE GTFEELSGNG SLFQKLMENA GKMDATQEMY KFDDEKILED PTVNVEIKLG STKQGEDGRS VLVKKEERES GIISWNVLTR
0901: YKNAVGGLWV VLILLACYVT TEALRLTSCT WLSFWTDQST SKSYSTGFYI VMFALFGFGQ VAVTFTNSFW LLTSSLHAAK TLHDAMLNSI LRAPMLFFDT
1001: NPTGRVINRF SKDIGDIDRI VANLMNMFMS QLWQLLSTFA LIGAVSTISL WAIMPLLILF YAAYLYYQNT SREVRRMDSV ARSPIYAQFG EALNGLSSIR
1101: AYKAYDRMAK INGKSVDNNI RFTLANTTCN RWLTIRLETL GGVMIWLTAT FAVMRSSNTE NQAGFASTMG LLLSYTLNIT TLMSGVLRQA SKAENSLNSV
1201: ERVGNYIDLP SEGAEIIESN RPVPGWPSRG SITFEDVHLR YRPGLPIVLH GLSFSVSPNE KVGVVGRTGA GKSSVLNALF RIVEVEKGRI MIDDYDVAKF
1301: GLTDLRRVLS IIPQSPVLFS GTVRFNIDPF DEHNDADLWE ALQRAHMKDV IARNPLGLDT EVSEGGENFS VGQRQLLSLV RALLRRSKIL VLDEATASVD
1401: VRTDTLIQRT IREEFKSCTM LVIAHRLNTI IDCDKILVLS SGQALEYDSP QELLSRDTSA FFGMVHSTGL ANAQHLCNLV FGGREVNGRR QEGFKSAKDS
1501: GGDEFSGEIG RRCRVVRRDP TKLRRDSTKL RRDSTKLRRE ARSLANSMNS GELGKLRRTR RSPANSVMYS ELGDLLANSA IFDELDETPS KTERAIVMEI
1601: SEEEDDSVYI ETIHI

Best Arabidopsis Sequence Match ( AT1G30410.2 )
(BLAST)

0001: MGFEALNWYC KPVADGFWEK AVDGAFGAYT PCAIDSLVML VSHFVLLGLC FYRIWIIFHN TKAQIYVLRK KYYNCVLGLL ACYCVVEPVL RLVMGISLFD
0101: MDEETDFPPF EVASLMVEAF AWFSMLVLIG LETKQYVKEF RWYVRFGVLY VLVADAVLLD LVLPLKNSIN RTALYLFISS RCSQALFGIL LLIYIPELDP
0201: YPGYHIVNNE PLDNVEYDAL RGGEHICPER HASIFSRIYF GWITPLMQLG YRKPITEKDV WQLDKWDQTE TLIKRFQRCW TEESRRPKPW LLRALNNSLG
0301: GRFWLAGIFK IGNDLSQFVG PVILSHLLRS MQEGDPAWVG YVYAFIIFVG VTLGVLCEAQ YFQNVWRVGF RLRSTLVAAI FHKSLRLTHE ARKNFASGKV
0401: TNMITTDANA LQQISQQLHG LWSAPFRIIV SMILLYQQLG VASLFGSLIL FLLIPLQTLI ISKMRKLTKE GLQWTDKRVG ITNEILSSMD TVKCYAWEKS
0501: FESRIQGIRN EELSWFRKAQ LLSAFNSFIL NSIPVVVTVV SFGVFVLLGG DLTPARAFTS LSLFAVLRFP LNMLPNLLSQ VVNANVSLQR IEELLLSEER
0601: ILAQNPPLQP GTPAISIKNG YFSWDSKTTK PTLSDINLEI PVGTLVAIVG GTGEGKTSLI SAMLGELSHA ETTSVVIRGS VAYVPQVSWI FNATVRENIL
0701: FGSDFESERY WRAIDATALQ HDLDLLPGRD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VYIFDDPLSA LDAHVAHQVF DSCMKDELRG KTRVLVTNQL
0801: HFLPLMDKII LVSEGMIKEE GTFVELSKSG ILFKKLMENA GKMDATQEVN TNDENILKLG PTVTVDVSER NLGSTKQGKR RRSVLIKQEE RETGIISWNV
0901: LMRYKEAVGG LWVVMILLAC YLATEVLRVS SSTWLSIWTD QSTSKNYSPG FYIVVYALLG FGQVAVTFTN SFWLITSSLH AARRLHDAML SSILRAPMLF
1001: FHTNPTGRVI NRFSKDIGDI DRNVANLMNM FMNQLWQLLS TFALIGTVST ISLWAIMPLL ILFYAAYLYY QSTSREVRRL DSVTRSPIYA QFGEALNGLS
1101: SIRAYKAYDR MAKINGKSMD NNIRFTLANT SSNRWLTIRL ETLGGVMIWL TATFAVLQNG NTNNQAGFAS TMGLLLSYTL NITSLLSGVL RQASRAENSL
1201: NSVERVGNYI DLPSEATDII ENNRPVCGWP SGGSIKFEDV HLRYRPGLPP VLHGLTFFVS PSEKVGVVGR TGAGKSSMLN ALFRIVEVEK GRIMIDDCDV
1301: AKFGLTDVRR VLSIIPQSPV LFSGTVRFNI DPFSEHNDAG LWEALHRAHI KDVISRNPFG LDAEVCEGGE NFSVGQRQLL SLARALLRRS KILVLDEATA
1401: SVDVRTDSLI QRTIREEFKS CTMLVIAHRL NTIIDCDKIL VLSSGQVLEY DSPQELLSRD TSAFFRMVHS TGPANAQYLS NLVFERRENG MSVGG

Arabidopsis Description

ATMRP13multidrug resistance-associated protein 13 [Source:TAIR;Acc:AT1G30410]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.