Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- endoplasmic reticulum 2
- vacuole 3
- extracellular 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72149 | Canola | cytosol, peroxisome, plasma membrane | 29.19 | 77.45 |
| AT1G30410.1 | Thale cress | plasma membrane | 69.33 | 75.17 |
| Bra014879.1-P | Field mustard | plasma membrane | 69.46 | 74.6 |
| CDX98202 | Canola | plasma membrane | 66.93 | 74.5 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 57.82 | 73.59 |
| EES12878 | Sorghum | plasma membrane | 73.34 | 73.2 |
| Os04t0620000-01 | Rice | plasma membrane | 72.97 | 72.83 |
| Zm00001d002275_P029 | Maize | plasma membrane | 72.6 | 72.38 |
| AT1G30420.1 | Thale cress | plasma membrane | 66.5 | 72.24 |
| HORVU2Hr1G103620.1 | Barley | plasma membrane | 72.17 | 71.99 |
| CDY09589 | Canola | plasma membrane | 65.83 | 71.6 |
| TraesCS1A01G404300.1 | Wheat | plasma membrane | 68.6 | 69.32 |
| CDY02290 | Canola | plasma membrane | 66.56 | 66.94 |
| Bra032386.1-P | Field mustard | plasma membrane | 58.68 | 66.0 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 57.76 | 64.47 |
| VIT_01s0010g02440.t01 | Wine grape | mitochondrion | 19.03 | 38.2 |
| VIT_07s0005g00260.t01 | Wine grape | plasma membrane | 27.46 | 34.98 |
| VIT_16s0050g02280.t01 | Wine grape | cytosol, golgi, plasma membrane | 26.23 | 32.64 |
| VIT_02s0025g00930.t01 | Wine grape | plasma membrane | 27.83 | 32.22 |
| VIT_09s0002g02440.t01 | Wine grape | plasma membrane | 25.62 | 31.83 |
| VIT_16s0050g02480.t01 | Wine grape | plasma membrane | 28.76 | 31.55 |
| VIT_15s0021g00220.t01 | Wine grape | plasma membrane | 28.94 | 31.13 |
| VIT_07s0005g04460.t01 | Wine grape | plastid | 29.19 | 30.94 |
| VIT_02s0025g00970.t01 | Wine grape | plasma membrane | 28.2 | 30.74 |
| VIT_02s0025g00950.t01 | Wine grape | plasma membrane | 27.71 | 30.45 |
| VIT_19s0015g00040.t01 | Wine grape | plasma membrane | 20.2 | 30.43 |
| VIT_09s0018g00310.t01 | Wine grape | plasma membrane | 24.08 | 28.64 |
| VIT_09s0002g02430.t01 | Wine grape | plasma membrane | 25.86 | 14.29 |
Protein Annotations
| Gene3D:1.20.1560.10 | EntrezGene:100246392 | wikigene:100246392 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:CCB55840 | ProteinID:CCB55840.1 |
| ncoils:Coil | UniProt:F6HLW5 | EMBL:FN595992 | GO:GO:0000166 | GO:GO:0000325 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | EntrezGene:LOC100246392 | wikigene:LOC100246392 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 |
| PANTHER:PTHR24223:SF251 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TIGR:TC70720 | TMHMM:TMhelix |
| UniParc:UPI000210990B | ArrayExpress:VIT_10s0003g04470 | EnsemblPlantsGene:VIT_10s0003g04470 | EnsemblPlants:VIT_10s0003g04470.t01 | unigene:Vvi.10818 | unigene:Vvi.7223 |
| RefSeq:XP_002281070 | RefSeq:XP_002281070.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr10:+:7765400..7821845
Molecular Weight (calculated)
182940.0 Da
IEP (calculated)
7.576
GRAVY (calculated)
0.032
Length
1624 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAFEPLVWYC QPVANGVWAK AAESAFGPYT PCAVDSIVVC ISHLVLLGLC CYRIWLIKMD FKVQRFCLQS NYYNYMLGLL ACYCTAEPLF RLVMGVSIFD
0101: LDEQTGLAPY EVFSLIIEAA TWCSMLVMIG VETKIYIRQF RWYVRFGVIY LLVGDAVMLN LILSLKDSYS RSVLYPPISS VLCQVLFGIC LLVHVPNLNP
0201: YVGYTPMQSD SLENTKYEVL PGGDQICPEK HANMFSRIYF GWMTPLMQQG YKKPITEKDI WKLDTWDQTE TLSRRFQKCW IEESQRSKPR LLRALNCSLG
0301: GRFWRGGFFK IGNDLSQFVG PVLLNHLLQS MQRGDPAWIG YIYAFSIFIG VSLGVLCEAQ YFQNVMRVGF RLRSTLVAAI FRKSLRLTHE GRKNFPSGKI
0401: TNMMTTDANA LQQICQQLHA LWSAPFRIII AMVLLYQQLG VASLLGSLML LLMLPIQTFI ISKMRKLSKE GLQRTDKRVS LMNEILAAMD TVKCYAWEKS
0501: FQSKVQSMRN DELSWFRKAQ LLSACNSFIL NSIPVIVTVT SFGAFTLLGG DLTPARAFTS LSLFAVLRFP LNMLPNLITQ VVTAHVSIQR LEQLFLTEER
0601: VLAPNPTLEP GLPAISIKDG YFSWDSKVEK PTLSNINLDI PVGSLVAVVG GTGEGKTSLI SAMLGELPPL SDASVVIRGT VAYVPQISWI FNATVRGNIL
0701: FGSDFEPARY WKAIDVTELQ HDLDLLPGHD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VYIFDDPLSA LDAHVAQQVF SNCIKEELKG KTRVLVTNQL
0801: HFLPHVDRII LVSDGTVKED GTFDDLSKNS KLFQKLMENA GKMEEQVEEN ECRENLSNNK SKPTTNGEVN ELPKNAIHSN KGKEGKSVLI KQEERETGIV
0901: SWKVLMRYKD ALGGLWVVTL LFACYVLTEV LRVLSSTWLS VWTDQSMSKD YRPGYYNLIY ALLSFGQVMV TLGNSFWLIT SSLHAAKILH NVMLNSILRA
1001: PMVFFHTNPI GRIINRFAKD LGDIDRNVAP SANMFLGQVW QLLSTFVLIA IVSTISLWAI MPLLILFYAA YLYYQSTSRE VKRLDSITRS PVYAQFGEAL
1101: NGLSTIRAYK AYDRMASING KSMDNNIRFT LANISSNRWL TIRLETLGGL MICLTATFAV MENSREENPA AFASTMGLLL SYTLNITSLL SGVLRQASRA
1201: ENSFNAVERV GTYVDLPSEA PTIIESNRPP PGWPSSGSIR FEDVVLRYRP ELPPVLHGIS FKISPSEKLG IVGRTGAGKS SMINALFRIV ELERGRIWID
1301: EYDIAKFGLT DLRKVLSIIP QSPVLFSGTV RFNLDPFNEH NDADLWEALE RAHLKDVIRR NSFGLDAEVA EGGENFSVGQ RQLLSLARAL LRRSKILVLD
1401: EATAAVDVRT DALIQKTIRE EFKTCTMLVI AHRLNTIIDC DRILVLDAGQ VVEYDTPEEL LQDEGSSFSR MVRSTGAANA QYLRSLVFGE DGQKKSGREE
1501: AKQLDRQKRW LASSRWAAAT QFALSISLTS SQNGLQFLDV EDEMNILKKT NDAVLTLRGV LEGTHDEVIE EMLKEYQVPR DRWWSALYKM VEGLAVMNRL
1601: ARHRFQQSEH DFEDTTLDWD LTEM
0101: LDEQTGLAPY EVFSLIIEAA TWCSMLVMIG VETKIYIRQF RWYVRFGVIY LLVGDAVMLN LILSLKDSYS RSVLYPPISS VLCQVLFGIC LLVHVPNLNP
0201: YVGYTPMQSD SLENTKYEVL PGGDQICPEK HANMFSRIYF GWMTPLMQQG YKKPITEKDI WKLDTWDQTE TLSRRFQKCW IEESQRSKPR LLRALNCSLG
0301: GRFWRGGFFK IGNDLSQFVG PVLLNHLLQS MQRGDPAWIG YIYAFSIFIG VSLGVLCEAQ YFQNVMRVGF RLRSTLVAAI FRKSLRLTHE GRKNFPSGKI
0401: TNMMTTDANA LQQICQQLHA LWSAPFRIII AMVLLYQQLG VASLLGSLML LLMLPIQTFI ISKMRKLSKE GLQRTDKRVS LMNEILAAMD TVKCYAWEKS
0501: FQSKVQSMRN DELSWFRKAQ LLSACNSFIL NSIPVIVTVT SFGAFTLLGG DLTPARAFTS LSLFAVLRFP LNMLPNLITQ VVTAHVSIQR LEQLFLTEER
0601: VLAPNPTLEP GLPAISIKDG YFSWDSKVEK PTLSNINLDI PVGSLVAVVG GTGEGKTSLI SAMLGELPPL SDASVVIRGT VAYVPQISWI FNATVRGNIL
0701: FGSDFEPARY WKAIDVTELQ HDLDLLPGHD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VYIFDDPLSA LDAHVAQQVF SNCIKEELKG KTRVLVTNQL
0801: HFLPHVDRII LVSDGTVKED GTFDDLSKNS KLFQKLMENA GKMEEQVEEN ECRENLSNNK SKPTTNGEVN ELPKNAIHSN KGKEGKSVLI KQEERETGIV
0901: SWKVLMRYKD ALGGLWVVTL LFACYVLTEV LRVLSSTWLS VWTDQSMSKD YRPGYYNLIY ALLSFGQVMV TLGNSFWLIT SSLHAAKILH NVMLNSILRA
1001: PMVFFHTNPI GRIINRFAKD LGDIDRNVAP SANMFLGQVW QLLSTFVLIA IVSTISLWAI MPLLILFYAA YLYYQSTSRE VKRLDSITRS PVYAQFGEAL
1101: NGLSTIRAYK AYDRMASING KSMDNNIRFT LANISSNRWL TIRLETLGGL MICLTATFAV MENSREENPA AFASTMGLLL SYTLNITSLL SGVLRQASRA
1201: ENSFNAVERV GTYVDLPSEA PTIIESNRPP PGWPSSGSIR FEDVVLRYRP ELPPVLHGIS FKISPSEKLG IVGRTGAGKS SMINALFRIV ELERGRIWID
1301: EYDIAKFGLT DLRKVLSIIP QSPVLFSGTV RFNLDPFNEH NDADLWEALE RAHLKDVIRR NSFGLDAEVA EGGENFSVGQ RQLLSLARAL LRRSKILVLD
1401: EATAAVDVRT DALIQKTIRE EFKTCTMLVI AHRLNTIIDC DRILVLDAGQ VVEYDTPEEL LQDEGSSFSR MVRSTGAANA QYLRSLVFGE DGQKKSGREE
1501: AKQLDRQKRW LASSRWAAAT QFALSISLTS SQNGLQFLDV EDEMNILKKT NDAVLTLRGV LEGTHDEVIE EMLKEYQVPR DRWWSALYKM VEGLAVMNRL
1601: ARHRFQQSEH DFEDTTLDWD LTEM
0001: MGFEFIEWYC KPVPNGVWTK QVANAFGAYT PCATDSFVLG ISQLVLLVLC LYRIWLALKD HKVERFCLRS RLYNYFLALL AAYATAEPLF RLIMGISVLD
0101: FDGPGLPPFE AFGLGVKAFA WGAVMVMILM ETKIYIRELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYSS YVLYLYTSEV GAQVLFGILL FMHLPNLDTY
0201: PGYMPVRSET VDDYEYEEIS DGQQICPEKH ANIFDKIFFS WMNPLMTLGS KRPLTEKDVW YLDTWDQTET LFTSFQHSWD KELQKPQPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNQLLKSM QEDAPAWMGY IYAFSIFVGV VFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RRKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIIA LILLYQQLGV ASLIGALLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
0601: LLPNPPIEPG EPAISIRNGY FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS AILGELPATS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDREKYE RAIDVTSLKH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE KCIKRELGQK TRVLVTNQLH
0801: FLSQVDRIVL VHEGTVKEEG TYEELSSNGP LFQRLMENAG KVEEYSEENG EAEADQTAEQ PVANGNTNGL QMDGSDDKKS KEGNKKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPLFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI SRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI
1301: LIDDCDVGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRAKDDS
1501: HHLQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL EGKHDKEIAE SLEEHNISRE GWLSSLYRMV EGLAVMSRLA
1601: RNRMQQPDYN FEGNTFDWDN VEM
0101: FDGPGLPPFE AFGLGVKAFA WGAVMVMILM ETKIYIRELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYSS YVLYLYTSEV GAQVLFGILL FMHLPNLDTY
0201: PGYMPVRSET VDDYEYEEIS DGQQICPEKH ANIFDKIFFS WMNPLMTLGS KRPLTEKDVW YLDTWDQTET LFTSFQHSWD KELQKPQPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNQLLKSM QEDAPAWMGY IYAFSIFVGV VFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RRKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIIA LILLYQQLGV ASLIGALLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
0601: LLPNPPIEPG EPAISIRNGY FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS AILGELPATS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDREKYE RAIDVTSLKH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE KCIKRELGQK TRVLVTNQLH
0801: FLSQVDRIVL VHEGTVKEEG TYEELSSNGP LFQRLMENAG KVEEYSEENG EAEADQTAEQ PVANGNTNGL QMDGSDDKKS KEGNKKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPLFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI SRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI
1301: LIDDCDVGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRAKDDS
1501: HHLQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL EGKHDKEIAE SLEEHNISRE GWLSSLYRMV EGLAVMSRLA
1601: RNRMQQPDYN FEGNTFDWDN VEM
Arabidopsis Description
ABCC2ABC transporter C family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42093]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.