Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 6
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g00950.t01 | Wine grape | plasma membrane | 91.8 | 87.14 |
| VIT_02s0025g00970.t01 | Wine grape | plasma membrane | 91.8 | 86.44 |
| Zm00001d045279_P001 | Maize | plasma membrane | 20.67 | 63.32 |
| CDX71911 | Canola | plasma membrane | 52.32 | 63.28 |
| CDY06021 | Canola | plasma membrane | 52.46 | 63.23 |
| PGSC0003DMT400018927 | Potato | plasma membrane | 56.66 | 62.95 |
| TraesCS7A01G119800.1 | Wheat | plasma membrane | 38.42 | 62.89 |
| TraesCS7D01G114300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 46.19 | 62.85 |
| VIT_16s0050g02480.t01 | Wine grape | plasma membrane | 66.14 | 62.7 |
| TraesCS7A01G119500.1 | Wheat | cytosol, peroxisome, plasma membrane | 55.17 | 60.94 |
| TraesCSU01G159700.1 | Wheat | cytosol, peroxisome, plasma membrane | 54.95 | 60.71 |
| TraesCS7D01G115900.1 | Wheat | plasma membrane | 55.45 | 60.22 |
| GSMUA_Achr10P... | Banana | plasma membrane | 52.17 | 60.0 |
| TraesCS2B01G529000.2 | Wheat | plasma membrane | 55.24 | 59.89 |
| VIT_16s0050g02280.t01 | Wine grape | cytosol, golgi, plasma membrane | 55.24 | 59.39 |
| Solyc08g081890.2.1 | Tomato | endoplasmic reticulum, nucleus, plasma membrane | 61.65 | 58.49 |
| AT3G59140.1 | Thale cress | plasma membrane | 60.23 | 58.16 |
| Bra007434.1-P | Field mustard | golgi, plasma membrane, plastid | 59.44 | 57.48 |
| TraesCS4A01G227600.1 | Wheat | cytosol, golgi, mitochondrion, plasma membrane | 47.68 | 57.42 |
| TraesCS7A01G118900.2 | Wheat | plasma membrane | 59.8 | 56.65 |
| OQU80926 | Sorghum | plasma membrane | 59.66 | 56.48 |
| KXG19351 | Sorghum | plasma membrane | 59.73 | 56.47 |
| Os06t0158900-00 | Rice | plasma membrane | 59.59 | 56.37 |
| TraesCS7B01G016500.1 | Wheat | plasma membrane | 59.37 | 56.25 |
| TraesCSU01G093100.1 | Wheat | plasma membrane | 59.3 | 56.18 |
| TraesCS7D01G116300.2 | Wheat | plasma membrane | 59.09 | 55.98 |
| Zm00001d045269_P004 | Maize | plasma membrane | 58.95 | 55.88 |
| KXG25638 | Sorghum | plasma membrane | 58.09 | 55.59 |
| GSMUA_Achr6P31980_001 | Banana | plasma membrane | 50.68 | 55.55 |
| HORVU7Hr1G024960.12 | Barley | golgi | 58.73 | 55.49 |
| Zm00001d031447_P003 | Maize | plastid | 58.87 | 55.21 |
| TraesCS7A01G119000.1 | Wheat | plasma membrane | 58.37 | 54.64 |
| TraesCS2D01G131000.1 | Wheat | plastid | 57.8 | 54.1 |
| TraesCS2A01G128500.1 | Wheat | plasma membrane | 57.31 | 53.78 |
| TraesCS2B01G150600.1 | Wheat | plasma membrane | 57.09 | 53.36 |
| HORVU2Hr1G022560.5 | Barley | mitochondrion | 57.31 | 52.45 |
| VIT_09s0002g02440.t01 | Wine grape | plasma membrane | 42.84 | 45.98 |
| VIT_01s0010g02440.t01 | Wine grape | mitochondrion | 24.73 | 42.89 |
| VIT_07s0005g00260.t01 | Wine grape | plasma membrane | 36.99 | 40.71 |
| VIT_19s0015g00040.t01 | Wine grape | plasma membrane | 28.65 | 37.29 |
| VIT_07s0005g04460.t01 | Wine grape | plastid | 40.63 | 37.21 |
| VIT_15s0021g00220.t01 | Wine grape | plasma membrane | 38.7 | 35.96 |
| VIT_10s0003g04470.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 32.22 | 27.83 |
| VIT_09s0018g00310.t01 | Wine grape | plasma membrane | 25.3 | 26.01 |
| VIT_09s0002g02430.t01 | Wine grape | plasma membrane | 43.55 | 20.78 |
Protein Annotations
| Gene3D:1.20.1560.10 | EntrezGene:100250083 | wikigene:100250083 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:CCB58226 | ProteinID:CCB58226.1 |
| UniProt:F6HUR0 | EMBL:FN596251 | GO:GO:0000166 | GO:GO:0000325 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | EntrezGene:LOC100250083 | wikigene:LOC100250083 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF263 |
| SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0002108BA3 | ArrayExpress:VIT_02s0025g00930 |
| EnsemblPlantsGene:VIT_02s0025g00930 | EnsemblPlants:VIT_02s0025g00930.t01 | RefSeq:XP_003631374 | RefSeq:XP_003631374.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr2:-:886894..894005
Molecular Weight (calculated)
156060.0 Da
IEP (calculated)
7.154
GRAVY (calculated)
0.182
Length
1403 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLNSAAFLNG SLGLVHLGLG IWILREKLSE ENTILPLHGW LAILLQGFTW FFLGLAVRFR RHQLLHIAGL RLCSVLAFFI AGFLCVTSIW EAIVGDAVSV
0101: KMILDVISFP GAILLMLSTF SGPKYAGTDS EIDGAGFYTP LPGEGGSGGD KINSDASLPP FEKAGLISRL SFWWLNSLMK KGKEKTLEDK DIPQLRKEDR
0201: AEMCYLMFME QQNKQKNKRS SDSPSILSTI CLWQWKQILI SGIFALIKVL TLSTGPLFLR AFILVAEGKE AFKYEGYALT GGLFLTKCLE SLSERQWFFR
0301: TRLIGLQVRS FLSAAIYQKQ LKLSNAAKGS YSPGQIINFV TIDAYKIGEY PYWFHQIWST SLQLCLGLAT IAALFVVILT VIANSPMGKL QHKYQKTLMG
0401: TQDKRLKAFT EALTNMKILK LYAWETHFKN VIEGLRKEEF KWLSSVLSQR GYSLILWWSF PIVVSVVAFW ACYFLGTTLS ATNVFTFMAS LRIAQEPIRL
0501: IPDVISAFIE AKVSLDRIAK FLDAPELQNK HVRRMCDGKE LEESIFIKSN RISWEDNSTR ATLRNINLVV KPGEKVAICG EVGSGKSTLL AAILGEVPHV
0601: NGIVRVYGKI AYVSQTAWIP TGTIRENILF GSAMDPYRYR EAIEKCALVK DLEMLPFGDL TEIGERGVNL SGGQKQRVQL ARALYQDADV YLLDDPFSAV
0701: DAHTATSLFN EYVMGALSTK TVILVTHQVD LLPAFDSVLL MSEGEILEAA TYDLLMHSSQ EFQDLVNAHN ATVGSEMQPE HDSTQKSKIP KGEIQEICTE
0801: KQLRDTSGEQ LIKKEERETG DTGLKPYLQY LKYCKGFLYF FLATLSHVIF IVGQLVQNYW LAANVQNSSV SQLKLIAVYT GIGLSLSLFL LLRSFFVLLG
0901: LGASQSIFST LLSSLFRAPM SFYDSTPLGR ILSRVSSDLS VVDLDVAFKF TFSVGAAMNT YASFGALAIL AWELVLVILP TIYLSILIQR YYFAAGKELM
1001: RINGTTKSFV ASHLSESIAG AMTIRAFGDE DRHFSKNLGF IDINASPFFY SFTANEWLIQ RLEILCAIVL SSSALALTLL HTSAAKAGFI GMALSYGLSV
1101: NAFLVFSVQS QCLLANMIVS VERLEQFLNI PSEAPDVMES NQPPLSWPAI GEVEIYDLKV KYRPNAPLVL QGISCKFGGG QKIGIVGRTG SGKTTLISTL
1201: FRLVEPTEGR IIIDGINIST IGVHDLRSRL GIIPQEPTLF SGSVRYNLDP LSLHTDEEIW EVLEKCQLRG AVQEKEEGLD SLVVQDGSNW SMGQRQLFCL
1301: GRALLKRSRI LVLDEATASI DNATDSILQK TIRTEFADCT VITVAHRIPT VMDCTMVLAI SDGKLVEYDE PMKLIKEGSL FGQLVKEYWS RSSNGRNTSE
1401: DWL
0101: KMILDVISFP GAILLMLSTF SGPKYAGTDS EIDGAGFYTP LPGEGGSGGD KINSDASLPP FEKAGLISRL SFWWLNSLMK KGKEKTLEDK DIPQLRKEDR
0201: AEMCYLMFME QQNKQKNKRS SDSPSILSTI CLWQWKQILI SGIFALIKVL TLSTGPLFLR AFILVAEGKE AFKYEGYALT GGLFLTKCLE SLSERQWFFR
0301: TRLIGLQVRS FLSAAIYQKQ LKLSNAAKGS YSPGQIINFV TIDAYKIGEY PYWFHQIWST SLQLCLGLAT IAALFVVILT VIANSPMGKL QHKYQKTLMG
0401: TQDKRLKAFT EALTNMKILK LYAWETHFKN VIEGLRKEEF KWLSSVLSQR GYSLILWWSF PIVVSVVAFW ACYFLGTTLS ATNVFTFMAS LRIAQEPIRL
0501: IPDVISAFIE AKVSLDRIAK FLDAPELQNK HVRRMCDGKE LEESIFIKSN RISWEDNSTR ATLRNINLVV KPGEKVAICG EVGSGKSTLL AAILGEVPHV
0601: NGIVRVYGKI AYVSQTAWIP TGTIRENILF GSAMDPYRYR EAIEKCALVK DLEMLPFGDL TEIGERGVNL SGGQKQRVQL ARALYQDADV YLLDDPFSAV
0701: DAHTATSLFN EYVMGALSTK TVILVTHQVD LLPAFDSVLL MSEGEILEAA TYDLLMHSSQ EFQDLVNAHN ATVGSEMQPE HDSTQKSKIP KGEIQEICTE
0801: KQLRDTSGEQ LIKKEERETG DTGLKPYLQY LKYCKGFLYF FLATLSHVIF IVGQLVQNYW LAANVQNSSV SQLKLIAVYT GIGLSLSLFL LLRSFFVLLG
0901: LGASQSIFST LLSSLFRAPM SFYDSTPLGR ILSRVSSDLS VVDLDVAFKF TFSVGAAMNT YASFGALAIL AWELVLVILP TIYLSILIQR YYFAAGKELM
1001: RINGTTKSFV ASHLSESIAG AMTIRAFGDE DRHFSKNLGF IDINASPFFY SFTANEWLIQ RLEILCAIVL SSSALALTLL HTSAAKAGFI GMALSYGLSV
1101: NAFLVFSVQS QCLLANMIVS VERLEQFLNI PSEAPDVMES NQPPLSWPAI GEVEIYDLKV KYRPNAPLVL QGISCKFGGG QKIGIVGRTG SGKTTLISTL
1201: FRLVEPTEGR IIIDGINIST IGVHDLRSRL GIIPQEPTLF SGSVRYNLDP LSLHTDEEIW EVLEKCQLRG AVQEKEEGLD SLVVQDGSNW SMGQRQLFCL
1301: GRALLKRSRI LVLDEATASI DNATDSILQK TIRTEFADCT VITVAHRIPT VMDCTMVLAI SDGKLVEYDE PMKLIKEGSL FGQLVKEYWS RSSNGRNTSE
1401: DWL
0001: MIENYWTSFC GNHHTSSNCT VRFLQICFGI TLSFLTLCIC LFHKEPPKRI HQFFCLRLVS ALFNGIIGSL DLVLGIWVLR ENHSKPLILW LVILIQGFTW
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR
Arabidopsis Description
ABCC10ABC transporter C family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYS2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.