Factsheet for VIT_09s0018g00310.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23646	Soybean	plasma membrane	63.3	58.86
AT2G07680.3	Thale cress	plasma membrane	59.78	57.22
CDY01519	Canola	plasma membrane	59.34	56.6
Bra012617.1-P	Field mustard	plasma membrane	58.68	56.01
Solyc03g117540.2.1	Tomato	extracellular	58.75	54.15
Zm00001d045097_P001	Maize	plasma membrane	54.14	50.48
TraesCS7B01G052900.1	Wheat	plasma membrane	53.77	50.38
EER89345	Sorghum	plasma membrane	54.07	50.38
HORVU7Hr1G030540.15	Barley	vacuole	53.63	50.17
VIT_01s0010g02440.t01	Wine grape	mitochondrion	20.51	34.61
VIT_07s0005g00260.t01	Wine grape	plasma membrane	27.03	28.94
VIT_16s0050g02280.t01	Wine grape	cytosol, golgi, plasma membrane	26.45	27.66
VIT_09s0002g02440.t01	Wine grape	plasma membrane	26.08	27.24
VIT_19s0015g00040.t01	Wine grape	plasma membrane	20.88	26.44
VIT_02s0025g00930.t01	Wine grape	plasma membrane	26.01	25.3
VIT_07s0005g04460.t01	Wine grape	plastid	28.35	25.26
VIT_15s0021g00220.t01	Wine grape	plasma membrane	27.69	25.03
VIT_16s0050g02480.t01	Wine grape	plasma membrane	27.11	25.0
VIT_02s0025g00950.t01	Wine grape	plasma membrane	26.3	24.29
VIT_10s0003g04470.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	28.64	24.08
VIT_02s0025g00970.t01	Wine grape	plasma membrane	26.08	23.89
VIT_09s0002g02430.t01	Wine grape	plasma membrane	26.89	12.48

Protein Annotations

KEGG:00230+2.7.7.7	KEGG:00240+2.7.7.7	Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:CCB49657	ProteinID:CCB49657.1
UniProt:F6HBQ8	EMBL:FN595513	GO:GO:0000166	GO:GO:0000325	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0005096	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006139
GO:GO:0006259	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015074
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0030234	GO:GO:0042626
GO:GO:0043547	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF00664	PFAM:PF07727	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24223	PANTHER:PTHR24223:SF330	InterPro:RVT_2	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF56672
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0002109290	ArrayExpress:VIT_09s0018g00310	EnsemblPlantsGene:VIT_09s0018g00310	EnsemblPlants:VIT_09s0018g00310.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:-:16188269..16274290

Molecular Weight (calculated)

152963.0 Da

IEP (calculated)

6.588

GRAVY (calculated)

0.195

Length

1365 amino acids

Sequence
(BLAST)

0001: MFYKHSNEDK VAILIVYVDD IVLTRDDCNE LEKLKGKLAE EFEIKDLGAL KYFLGMEFAR SKEGIFVNQW KYVLDLLDET GMLGCKLAET PIELNVKLQP
0101: KKAKNVKDRD RYQRLVGRLI YLSHTCLDIA FSVSMVSQFM HAPGPEHFEA VYRILRYLKG TPGGNLVTWR SKKQNVVARS SAEVEFRAVT HGICEIMWIR
0201: RLLEELKMTG SSPMKLYCDN KAVISVAYNP VLHDRTKHVE VDKHFIKEKI DNGLVCMTYI PTEEQVADVF TKGLHKRQFD FLCLCVNLAE RSKFSEGEIQ
0301: TFMSVDADRI VNLCNSFHDM WSLPLQIGLA LYLLYTQVKF AFVSGIAITI LLIPVNKWIS KFIARATEKM MKKKDERISK TAEILAYIRT LKMYGWELLF
0401: MSWLMEIRSS EVKHLSTRKY LDAWCVFFWA TTPTLFSLFT FGLFTLMGYQ LDAAMVFTCL ALFNTLISPL NSFPWVINGL IDAIISTRRL SRFLSCSEHK
0501: PAELEQTAGS PSSPSFSGQF NFKLEDMAVA MYDASCAWSS SEEVEKDLVL HHVTLGLPRG SLVAIIGEVG SGKSSLLNSI LKEMRLIHGS IYSDGSITYV
0601: PQVPWILSGT IRENILFGKA YDPTRYSDVL EACALDIDIS LMVGGDMAYI GDKGVNLSGG QRARLALARA IYHGSDIFML DDVLSAVDTQ VARCILHNAI
0701: LGPLMNQHTR VLCTHNIQAM SSADMIVVMD KGHVKWVGSS TDFSVSSYST FCSLNEFTVS QVRSLECSTN TSTETKQDCK PERDSICVPG EAQEIIEVEL
0801: RKEGRVELTV YNYATYSGWF ITVVICLSAI LMQASRNGND LWLSYWVDTT TGSSHTEYST SFYLVVLCIF CVINSFLTLV RAFSFAFGGL RAAVQVHNTL
0901: LSKLINAPVH FFDKTPGGRI LNRMSSDLYT IDDSLPFILN ILLANIVGLL GIAIVLSYVQ VVFLLLLLPF WYVYSKIQFY YRSTSRELRR LDSVSRSPIF
1001: ASFTETLDGS STIRAFKCED LFFTRFSEHV ALYQQTSYSE LIASLWLSLR LQLLAALVIS FVAMMAVIGS RDSLPISLGT PGLVGLALSY AAPIVSLLGS
1101: FLTSFTETEK EMVSVERVLQ YMDIPQEELN GCQSLSPNWP SEGYIMFQNV SLRYLPSLPD ALHDITFTIS GGTQVGIIGR TGAGKSSILN ALFRLTPICK
1201: GCILVDGLDI ADVPVRDLRS HFAVVPQSPF LFEGSLRDNL DPFRVSDDLK IWKTLERCHV KEEVEVAGGL DIHVKESGTS FSVGQRQLLC LARALLKSSK
1301: VLCLDECTAN IDAQTSSVLQ NAILTECRGM TVITIAHRIS TVLSMDNILI LDRGILMLEI SWVGL

Best Arabidopsis Sequence Match ( AT2G07680.3 )
(BLAST)

0001: MAITLTNFTF LYMDANLKRL GDIVLGFGAN VVTLLLILIL TITRRNGRCN RRKSYIEKCL LYVTPALGAC LSCVDLVLLV RTNRRREVIL CFVPLSGFVM
0101: WIAVILSLKF ACCACHVFTS QILCFWWIFR FLTDALHLNM IFTLQEICLI MLDIAFGISI NVLRIKQAHP KIIPLEDPLI EDDDDQKRIE KNGSWWDLFT
0201: FGYIGSIMKH GSVKQLELEN LLTLPPEMDP FTCCENLLRC WQLQECNNYS TPSLIWSIYG VYGWPYFRLG LLKVFNDCIG FAGPLLLNRL IKYLEKGSGS
0301: SVGYTLAISL GFISIFKSFL DTQYTFRLSK LKLKLRSSIM SVIYRKCLWV NTANRSGFSE GEIQTFMSVD ADRIVNLCNS LHDLWSLPLQ IGIALYLLYT
0401: QVKFAFLSGL AITILLIPVN KWISVLIASA TEKMMKLKDE RIRKTGELLT NIRTLKMYGW DNWFADWLKE TRATEVTHLA TRKYLDAWCV FFWATTPTLF
0501: SLCTFGLFAL MGHQLDAATV FTCLALFNSL ISPLNSFPWV INGLIDAFIS TRRVSKFLCC LEHSRDFSID SGFTSEDLAV CVEDASCTWS SNVEEDYNLT
0601: IKQVSLRVPK GSFVAVIGEV GSGKTSLLNS LLGEMRCVHG SILLNGSVAY VPQVPWLLSG TVRENILFGK PFDSKRYFET LSACALDVDI SLMVGGDMAC
0701: IGDKGLNLSG GQRARFALAR AVYHGSDMYL LDDVLSAVDS QVGCWILQRA LLGPLLNKKT RVMCTHNIQA ISCADMIVVM DKGKVNWSGS VTDMPKSISP
0801: TFSLTNEFDM SSPNHLTKRK ETLSIKEDGV DEISEAAADI VKLEERKEGR VEMMVYRNYA VFSGWFITIV ILVSAVLMQG SRNGNDLWLS YWVDKTGKGV
0901: SHYSTSFYLM VLCIFCIINS ILTLVRAFSF AFGGLKAAVH VHNALISKLI NAPTQFFDQT PSGRILNRFS SDLYTIDDSL PFILNILLAN FVGLLGIIVV
1001: LSYVQVLFLL LLLPFWYIYS KLQVFYRSTS RELRRLDSVS RSPIYASFTE TLDGSSTIRA FKSEEHFVGR FIEHLTLYQR TSYSEIIASL WLSLRLQLLG
1101: SMIVLFVAVM AVLGSGGNFP ISFGTPGLVG LALSYAAPLV SLLGSLLTSF TETEKEMVSV ERVLQYMDVP QEEVSGPQSL SDKWPVHGLV EFHNVTMRYI
1201: STLPPALTQI SFTIQGGMHV GVIGRTGAGK SSILNALFRL TPVCSGEILV DGKNISHLPI RELRSCLAVV PQSPFLFQGS LRDNLDPLGL SEDWRIWEIL
1301: DKCKVKAAVE SVGGLDSYVK ESGCSFSVGQ RQLLCLARAL LKSSKILCLD ECTANIDVHT ASLLHNTISS ECKGVTVITI AHRISTVVDL DSILILDRGI
1401: LVEQGKPQHL LQDDSSTFSS FVRASQ

Arabidopsis Description

ATMRP11multidrug resistance-associated protein 11 [Source:TAIR;Acc:AT2G07680]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.