Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- plasma membrane 4
- cytosol 1
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91620 | Soybean | plasma membrane | 67.91 | 81.05 |
| KRH35194 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 75.54 | 75.59 |
| PGSC0003DMT400023487 | Potato | plasma membrane | 74.86 | 75.58 |
| Solyc03g007530.2.1 | Tomato | plasma membrane | 74.19 | 74.85 |
| CDX71911 | Canola | plasma membrane | 58.31 | 74.4 |
| CDY06021 | Canola | plasma membrane | 58.38 | 74.23 |
| Zm00001d045279_P001 | Maize | plasma membrane | 22.57 | 72.93 |
| Solyc06g036490.1.1 | Tomato | plastid | 58.24 | 72.25 |
| KRH08764 | Soybean | plasma membrane | 71.89 | 71.84 |
| VIT_16s0050g02280.t01 | Wine grape | cytosol, golgi, plasma membrane | 63.24 | 71.72 |
| TraesCS7D01G114300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 49.32 | 70.81 |
| TraesCS7A01G119800.1 | Wheat | plasma membrane | 40.54 | 70.01 |
| AT3G59140.1 | Thale cress | plasma membrane | 67.64 | 68.89 |
| GSMUA_Achr10P... | Banana | plasma membrane | 56.42 | 68.44 |
| Bra007434.1-P | Field mustard | golgi, plasma membrane, plastid | 67.03 | 68.37 |
| TraesCSU01G159700.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.58 | 68.27 |
| PGSC0003DMT400074333 | Potato | mitochondrion | 70.88 | 67.94 |
| KRH08755 | Soybean | plasma membrane | 68.92 | 67.86 |
| TraesCS7A01G119500.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.18 | 67.8 |
| TraesCS2B01G529000.2 | Wheat | plasma membrane | 59.26 | 67.77 |
| TraesCS7D01G115900.1 | Wheat | plasma membrane | 58.65 | 67.18 |
| VIT_02s0025g00930.t01 | Wine grape | plasma membrane | 62.7 | 66.14 |
| TraesCS7B01G016500.1 | Wheat | plasma membrane | 65.68 | 65.63 |
| TraesCS7D01G116300.2 | Wheat | plasma membrane | 65.41 | 65.36 |
| TraesCSU01G093100.1 | Wheat | plasma membrane | 65.34 | 65.29 |
| Os06t0158900-00 | Rice | plasma membrane | 65.34 | 65.21 |
| KXG19351 | Sorghum | plasma membrane | 65.27 | 65.09 |
| OQU80926 | Sorghum | plasma membrane | 65.0 | 64.91 |
| VIT_02s0025g00970.t01 | Wine grape | plasma membrane | 65.2 | 64.77 |
| GSMUA_Achr6P31980_001 | Banana | plasma membrane | 55.95 | 64.69 |
| Zm00001d045269_P004 | Maize | plasma membrane | 64.26 | 64.26 |
| VIT_02s0025g00950.t01 | Wine grape | plasma membrane | 63.92 | 64.01 |
| TraesCS4A01G227600.1 | Wheat | cytosol, golgi, mitochondrion, plasma membrane | 50.27 | 63.86 |
| KXG25638 | Sorghum | plasma membrane | 63.18 | 63.78 |
| TraesCS7A01G118900.2 | Wheat | plasma membrane | 63.78 | 63.74 |
| Zm00001d031447_P003 | Maize | plastid | 64.12 | 63.44 |
| HORVU7Hr1G024960.12 | Barley | golgi | 63.31 | 63.1 |
| TraesCS7A01G119000.1 | Wheat | plasma membrane | 62.77 | 61.97 |
| TraesCS2D01G131000.1 | Wheat | plastid | 62.36 | 61.57 |
| TraesCS2B01G150600.1 | Wheat | plasma membrane | 62.23 | 61.36 |
| TraesCS2A01G128500.1 | Wheat | plasma membrane | 61.96 | 61.34 |
| HORVU2Hr1G022560.5 | Barley | mitochondrion | 62.09 | 59.95 |
| VIT_09s0002g02440.t01 | Wine grape | plasma membrane | 41.89 | 47.44 |
| VIT_01s0010g02440.t01 | Wine grape | mitochondrion | 24.46 | 44.75 |
| VIT_07s0005g00260.t01 | Wine grape | plasma membrane | 36.15 | 41.96 |
| VIT_07s0005g04460.t01 | Wine grape | plastid | 42.23 | 40.8 |
| VIT_19s0015g00040.t01 | Wine grape | plasma membrane | 29.32 | 40.26 |
| VIT_15s0021g00220.t01 | Wine grape | plasma membrane | 40.68 | 39.87 |
| VIT_10s0003g04470.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 31.55 | 28.76 |
| VIT_09s0018g00310.t01 | Wine grape | plasma membrane | 25.0 | 27.11 |
| VIT_09s0002g02430.t01 | Wine grape | plasma membrane | 44.32 | 22.31 |
Protein Annotations
| Gene3D:1.20.1560.10 | EntrezGene:100245097 | wikigene:100245097 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AGC23330 | ProteinID:AGC23330.1 |
| EMBL:AM440507 | ProteinID:CAN76203 | ProteinID:CAN76203.1 | ProteinID:CCB47763 | ProteinID:CCB47763.1 | UniProt:F6H6G1 |
| EMBL:FN595243 | GO:GO:0000166 | GO:GO:0000325 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 |
| InterPro:IPR036640 | EMBL:JX245004 | EntrezGene:LOC100245097 | wikigene:LOC100245097 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF192 |
| SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TIGR:TC60768 | TMHMM:TMhelix | UniParc:UPI00015CCC42 |
| ArrayExpress:VIT_16s0050g02480 | EnsemblPlantsGene:VIT_16s0050g02480 | EnsemblPlants:VIT_16s0050g02480.t01 | unigene:Vvi.4609 | RefSeq:XP_002267650 | RefSeq:XP_002267650.2 |
| RefSeq:XP_010662587.1 | RefSeq:XP_010662590.1 | RefSeq:XP_010662591.1 | RefSeq:XP_019081350.1 | RefSeq:XP_019081351.1 | SEG:seg |
Description
No Description!
Coordinates
chr16:+:19447503..19454978
Molecular Weight (calculated)
164818.0 Da
IEP (calculated)
6.808
GRAVY (calculated)
0.213
Length
1480 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDLWTMFCG EPSCLDSGGC SSEFIFFNHP SSCANHALTV CFDILLFVMF LFTMIQRTSS KPVHVPGQFQ RFSPLQISSA IFNGCLGLVY LGLGVWILEE
0101: NLRKTQIVLP LHWWLLPLLQ GFTWLLVGLM VSLRGQYLPR SPLRILSILA FLFSGITGVL SIFSAIVYKE ASVEIVLNVL SLPGAILLLL CAYKGYKYEE
0201: TDKIVNGSGL YTPLNGEADG SAKTDSVGDV TPFAKAGFFS SMSFWWLNPL MKRGTKKTLE NEDIPKLREE DRAESCYLQF LEELIKQKQI EPSSQPSILR
0301: VIILCYWKDI FISGFFALVK ILTLSTGPLL LNAFIKVAEG KELFKNEGYV LAMALFVSKN VESLSQRQWY FRSRLIGLRV RSLLTAAIYK KQLRLSNAAK
0401: MIHSSGEITN YVTVDAYRIG EFPFWFHQTW TTSLQLCIVL VILFNILGLA TFAALVVIIL TVLCNAPLAK LQHKFQSKLM VAQDERLRAC SEALVNMKVL
0501: KLYAWENHFK NVIEKLRNVE YKWLSGVQLR KGYNGFLFWS SPVLVSAATF GACFFLGIPL NASNVFTFVA ALRLVQDPIR SIPDVIGVVI QAKVAFARIV
0601: KFLEAPELQT SNVRQKSNIE NISNAISIKS ANFSWEEKLS KSTLRDISLE VRTGEKVAIC GEVGSGKSTL LAAILGEIPD VQGTIRVYGR IAYVSQTAWI
0701: QTGSIQENIL FGSSMDPERY QATLEKCSLV KDLDLLPYGD LTEIGERGVN LSGGQKQRIQ LARALYQDAD IYLLDDPFSA VDAHTATSLF NEYVMDALSG
0801: KTVLLVTHQV DFLPAFDSVL LMSDGEIIQA APYQQLLVSS QEFVDLVNAH KETAGSERLA EVTPEKFENS VREINKTYTE KQFKAPSGDQ LIKQEEREIG
0901: DMGFKPYMQY LSQNKGYLFF SLAALSHILF VAGQISQNSW MAANVDNPNI STLQLIVVYL LIGATSTLFL LSRALFVVAL GLQSSKSLFT QLLNSLFRAP
1001: MSFYDSTPLG RILSRISNDL SIVDLDVPFS FVFAFGATTN AYSNLGVLAV VTWQVLFVSI PMIYVAIRLQ RYYFASAKEL MRINGTTKSL VANHLAESIA
1101: GAMTIRAFEE EERFFVKNMD FIDTNASPFF HSFAANEWLI QRLEALSAMV LSSSALCMIL LPPGTFTAGF IGMAMSYGLS LNVSLVFSIQ NQCILANYII
1201: SVERLNQYMH IPSEAPEVIE GSRPPPNWPA VGRVDIHDLQ IRYRPDTPLV LRGINCTFEG GHKIGIVGRT GSGKTTLIGA LFRLVEPAGG KIIVDGIDIS
1301: TIGLHDLRSH FGIIPQDPTL FNGAVRYNLD PLSQHTDHEI WEVLGKCQLQ EAVQEKEEGL GSIVAEGGSN WSMGQRQLFC LGRALLRRSR ILVLDEATAS
1401: IDNATDLILQ KTIRTEFADC TVITVAHRIP TVMDCTMVLA ISDGKLVEYD EPAKLMKREG SLFGQLVREY WSHFHSAESH
0101: NLRKTQIVLP LHWWLLPLLQ GFTWLLVGLM VSLRGQYLPR SPLRILSILA FLFSGITGVL SIFSAIVYKE ASVEIVLNVL SLPGAILLLL CAYKGYKYEE
0201: TDKIVNGSGL YTPLNGEADG SAKTDSVGDV TPFAKAGFFS SMSFWWLNPL MKRGTKKTLE NEDIPKLREE DRAESCYLQF LEELIKQKQI EPSSQPSILR
0301: VIILCYWKDI FISGFFALVK ILTLSTGPLL LNAFIKVAEG KELFKNEGYV LAMALFVSKN VESLSQRQWY FRSRLIGLRV RSLLTAAIYK KQLRLSNAAK
0401: MIHSSGEITN YVTVDAYRIG EFPFWFHQTW TTSLQLCIVL VILFNILGLA TFAALVVIIL TVLCNAPLAK LQHKFQSKLM VAQDERLRAC SEALVNMKVL
0501: KLYAWENHFK NVIEKLRNVE YKWLSGVQLR KGYNGFLFWS SPVLVSAATF GACFFLGIPL NASNVFTFVA ALRLVQDPIR SIPDVIGVVI QAKVAFARIV
0601: KFLEAPELQT SNVRQKSNIE NISNAISIKS ANFSWEEKLS KSTLRDISLE VRTGEKVAIC GEVGSGKSTL LAAILGEIPD VQGTIRVYGR IAYVSQTAWI
0701: QTGSIQENIL FGSSMDPERY QATLEKCSLV KDLDLLPYGD LTEIGERGVN LSGGQKQRIQ LARALYQDAD IYLLDDPFSA VDAHTATSLF NEYVMDALSG
0801: KTVLLVTHQV DFLPAFDSVL LMSDGEIIQA APYQQLLVSS QEFVDLVNAH KETAGSERLA EVTPEKFENS VREINKTYTE KQFKAPSGDQ LIKQEEREIG
0901: DMGFKPYMQY LSQNKGYLFF SLAALSHILF VAGQISQNSW MAANVDNPNI STLQLIVVYL LIGATSTLFL LSRALFVVAL GLQSSKSLFT QLLNSLFRAP
1001: MSFYDSTPLG RILSRISNDL SIVDLDVPFS FVFAFGATTN AYSNLGVLAV VTWQVLFVSI PMIYVAIRLQ RYYFASAKEL MRINGTTKSL VANHLAESIA
1101: GAMTIRAFEE EERFFVKNMD FIDTNASPFF HSFAANEWLI QRLEALSAMV LSSSALCMIL LPPGTFTAGF IGMAMSYGLS LNVSLVFSIQ NQCILANYII
1201: SVERLNQYMH IPSEAPEVIE GSRPPPNWPA VGRVDIHDLQ IRYRPDTPLV LRGINCTFEG GHKIGIVGRT GSGKTTLIGA LFRLVEPAGG KIIVDGIDIS
1301: TIGLHDLRSH FGIIPQDPTL FNGAVRYNLD PLSQHTDHEI WEVLGKCQLQ EAVQEKEEGL GSIVAEGGSN WSMGQRQLFC LGRALLRRSR ILVLDEATAS
1401: IDNATDLILQ KTIRTEFADC TVITVAHRIP TVMDCTMVLA ISDGKLVEYD EPAKLMKREG SLFGQLVREY WSHFHSAESH
0001: MIENYWTSFC GNHHTSSNCT VRFLQICFGI TLSFLTLCIC LFHKEPPKRI HQFFCLRLVS ALFNGIIGSL DLVLGIWVLR ENHSKPLILW LVILIQGFTW
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR
Arabidopsis Description
ABCC10ABC transporter C family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYS2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.