Factsheet for Zm00001d045279_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G119800.1	Wheat	plasma membrane	79.91	42.71
TraesCS7D01G114300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	79.26	35.21
Zm00001d045269_P004	Maize	plasma membrane	98.03	30.34
TraesCSU01G159700.1	Wheat	cytosol, peroxisome, plasma membrane	81.44	29.37
TraesCS7D01G115900.1	Wheat	plasma membrane	82.53	29.26
TraesCS7A01G119500.1	Wheat	cytosol, peroxisome, plasma membrane	80.57	29.06
KXG19351	Sorghum	plasma membrane	93.67	28.91
TraesCS2B01G529000.2	Wheat	plasma membrane	80.35	28.44
KRG91620	Soybean	plasma membrane	74.02	27.34
CDX71911	Canola	plasma membrane	67.9	26.81
Zm00001d031447_P003	Maize	plastid	87.12	26.67
CDY06021	Canola	plasma membrane	67.69	26.63
TraesCSU01G093100.1	Wheat	plasma membrane	85.37	26.4
TraesCS7B01G016500.1	Wheat	plasma membrane	85.15	26.33
Os06t0158900-00	Rice	plasma membrane	84.72	26.16
TraesCS7D01G116300.2	Wheat	plasma membrane	84.5	26.13
HORVU7Hr1G024960.12	Barley	golgi	83.84	25.86
GSMUA_Achr10P...	Banana	plasma membrane	67.47	25.33
TraesCS7A01G118900.2	Wheat	plasma membrane	81.88	25.32
TraesCS2D01G131000.1	Wheat	plastid	81.88	25.02
Solyc06g036490.1.1	Tomato	plastid	64.85	24.9
TraesCS2A01G128500.1	Wheat	plasma membrane	81.0	24.82
TraesCS2B01G150600.1	Wheat	plasma membrane	81.22	24.78
TraesCS7A01G119000.1	Wheat	plasma membrane	80.79	24.68
HORVU2Hr1G022560.5	Barley	mitochondrion	81.88	24.46
VIT_16s0050g02280.t01	Wine grape	cytosol, golgi, plasma membrane	64.63	22.68
KRH35194	Soybean	endoplasmic reticulum, nucleus, plasma membrane	73.14	22.65
VIT_16s0050g02480.t01	Wine grape	plasma membrane	72.93	22.57
PGSC0003DMT400023487	Potato	plasma membrane	71.4	22.31
Solyc03g007530.2.1	Tomato	plasma membrane	71.4	22.29
AT3G59140.1	Thale cress	plasma membrane	67.9	21.4
Bra007434.1-P	Field mustard	golgi, plasma membrane, plastid	67.69	21.36
KRH08764	Soybean	plasma membrane	67.03	20.73
VIT_02s0025g00930.t01	Wine grape	plasma membrane	63.32	20.67
VIT_02s0025g00970.t01	Wine grape	plasma membrane	64.85	19.93
VIT_02s0025g00950.t01	Wine grape	plasma membrane	64.19	19.89
KRH08755	Soybean	plasma membrane	64.85	19.76
PGSC0003DMT400018927	Potato	plasma membrane	53.71	19.48
PGSC0003DMT400074333	Potato	mitochondrion	62.45	18.52
Solyc08g081890.2.1	Tomato	endoplasmic reticulum, nucleus, plasma membrane	59.39	18.39
Zm00001d027625_P001	Maize	plasma membrane	50.66	15.54
Zm00001d020666_P004	Maize	plasma membrane	43.01	14.96
Zm00001d008733_P001	Maize	plasma membrane	45.63	13.95
Zm00001d048329_P003	Maize	plasma membrane	44.54	13.43
Zm00001d009243_P001	Maize	mitochondrion	43.89	13.32
Zm00001d004361_P001	Maize	plasma membrane	43.89	13.09
Zm00001d002503_P001	Maize	plasma membrane	43.89	13.05
Zm00001d025043_P004	Maize	plasma membrane, plastid	40.17	12.07
Zm00001d026041_P005	Maize	plasma membrane	34.93	11.98
Zm00001d045097_P001	Maize	plasma membrane	29.26	9.15
Zm00001d002275_P029	Maize	plasma membrane	29.91	8.41
Zm00001d048327_P001	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	UniProt:A0A1D6NV16	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	ProteinID:AQL01968.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	PFscan:PS50929
PANTHER:PTHR24223	PANTHER:PTHR24223:SF192	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0008442AAF
EnsemblPlantsGene:Zm00001d045279	EnsemblPlants:Zm00001d045279_P001	EnsemblPlants:Zm00001d045279_T001	SEG:seg	:	:

Description

ABC transporter C family member 10

Coordinates

chr9:+:17760031..17762932

Molecular Weight (calculated)

50669.8 Da

IEP (calculated)

6.790

GRAVY (calculated)

0.298

Length

458 amino acids

Sequence
(BLAST)

001: MGDTGLKPYI LYLRQNKGFF YASLGIISHI IFVCGQISQN SWMATNVENP DVSTLKLTSV YIAIGIFSVF FLLFRSLAVV VLGVKTSRSL FSKLLNSLFR
101: APMSFYDSTP LGRILSRVSS DLSIVDLDIP FGFMFSVGAG INAYSNLGVL AIVTWQVLFV SVPMIVLAIR LQRYYLASSK ELMRINGTTK SALANHLGES
201: IAGAITIRAF QEEDRFFEKN LELVDKNAGP YFYNFAATEW LIQRLETMSD AVLSFSALIM ALLPQGTFSP GFVGMALSYG LSLNISFVFS IQNQCQLASQ
301: IISVERVHQY MDIPSEAAEI IEENRPAPDW PQVGRVDLKD LKIQTRYAPL VLHGITCSFH GGDKIGIVGR TGSGKTTLIG ALFRLVEPTG GKIIIDSIDI
401: TTIGLHDLRS RLGIIPQDPT LFQGTIRYNL DPLGQFSDQQ IWEVLGKCQL LEAVQEKE

Best Arabidopsis Sequence Match ( AT3G21250.1 )
(BLAST)

0001: MAAFIGSLPW CDVELNLASS CFQRTAIAFV NLLFLCIFYL FLIASCVSTH FIVRGRKKGW IFVAVAICCA ITSFIFLGVG LNSLIHGGND VTEISWVACF
0101: VEGIIWVSLA VSLLVNGSKW VNILVSVWWV SFALLDLVAK SGILLQGNGI RILDILTLPM SLLLLLCSWM NLRSSSAAAQ DCSVTGLSDP LLTKNPRKES
0201: ARLATAGFFS ILSFSWMNPL LSLGFKKPLS PEDIPSVVPE DEAQLAYKKF SQAWDTLLGD ESSTKERNLV FRAVVKVYFK ENIFIAVFAF LRTFAVVSLP
0301: LMLYVFVDYA NSDHRDLRNG FFNLACLVML KLVESLTMRH WYFASRRSGM RIRSALMVAA YKKQLKLSSL GRKRHSSGEI VNYIAVDAYR MGEFLWWFHS
0401: GWSLSLQLLL STAVLFGVVG AGAFPGLILL LLCGLLNLPF AKMLQNCQTQ FMIAQDKRLR STSEILNSMK VIKLQSWEDE FKKKIESCRD DEFTWLAKAQ
0501: LTKAFGSFLY WMSPTIVSSV VFLGCALLKS APLNASTIFT VLATLRVMSE PVKIIPDAIS AIIQGNVSFQ RLNNFLLDDE LKMDEIERSG LDASGTAVDI
0601: QVGNFGWEPE TKIPTLRNIH LEIKHGQKVA VCGPVGAGKS SLLHAVLGEI PKVSGTVKVF GSIAYVSQTS WIQSGTIRDN ILYGKPMESR RYNAAIKACA
0701: LDKDMNGFGH GDLTEIGQRG INLSGGQKQR IQLARAVYAD ADVYLLDDPF SAVDAHTAGV LFHKCVEDSL KEKTVILVTH QVMEEGTITQ SGKYEELLMM
0801: GTAFQQLVNA HNDAVTVLPL ASNESLGDLR KEGKDREIRN MTVVEKIEEE IEKTDIPGVQ LTQEEEKESG YVGMKPFLDY IGVSRGWCLL WSSVLGQVGF
0901: VVFQAASTYW LAFAIGIPKI TNTMLIGVYS IISTLSAGFV YARAITTAHL GLKASKAFFS GFTNAVFKAP MLFFDSTPVG RILTRASSDL NVLDYDVPFA
1001: FIFVVAPAVE LTAALLIMTY VTWQVIIIAL LALAATKVVQ DYYLASAREL IRINGTTKAP VMNYAAETSL GVVTIRAFGT AERFFKNYLN LVDADAVLFF
1101: LSNAAMEWVI LRIETLQNVT LFTCALLLIL IPKGYIAPGL VGLSLSYALT LTQTQVFLTR WYCTLSNSII SVERIKQYMN IPEEPPAIID DKRPPSSWPS
1201: NGTIHLQELK IRYRPNAPLV LKGISCTFRE GTRVGVVGRT GSGKSTLISA LFRLVEPASG CILIDGIDIS KIGLKDLRMK LSIIPQEPTL FRGCIRTNLD
1301: PLGVYSDDEI WKALEKCQLK TTISNLPNKL DSSVSDEGEN WSVGQRQLFC LGRVLLKRNK ILVLDEATAS IDSATDAIIQ RIIREEFADC TVITVAHRVP
1401: TVIDSDMVMV LSFGDLVEYN EPSKLMETDS YFSKLVAEYW ASCRGNSSQN LQL

Arabidopsis Description

MRP6Multidrug resistance-associated protein 6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.