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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d045279_P001 Maize plasma membrane 26.16 84.72
TraesCS7B01G016500.1 Wheat plasma membrane 84.49 84.61
TraesCSU01G093100.1 Wheat plasma membrane 83.88 84.0
TraesCS7D01G116300.2 Wheat plasma membrane 83.82 83.93
TraesCS7D01G114300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 57.79 83.12
KXG19351 Sorghum plasma membrane 82.4 82.34
TraesCS7A01G119500.1 Wheat cytosol, peroxisome, plasma membrane 70.26 82.05
OQU80926 Sorghum plasma membrane 81.86 81.92
HORVU7Hr1G024960.12 Barley golgi 81.93 81.82
TraesCS7D01G115900.1 Wheat plasma membrane 71.07 81.58
TraesCS7A01G118900.2 Wheat plasma membrane 81.39 81.5
TraesCSU01G159700.1 Wheat cytosol, peroxisome, plasma membrane 69.79 81.5
TraesCS7A01G119800.1 Wheat plasma membrane 47.0 81.33
TraesCS2B01G529000.2 Wheat plasma membrane 70.53 80.83
KXG25638 Sorghum plasma membrane 79.16 80.08
Zm00001d045269_P004 Maize plasma membrane 79.5 79.66
Zm00001d031447_P003 Maize plastid 78.49 77.81
TraesCS2B01G150600.1 Wheat plasma membrane 77.07 76.15
TraesCS2A01G128500.1 Wheat plasma membrane 76.13 75.52
TraesCS2D01G131000.1 Wheat plastid 76.06 75.25
TraesCS7A01G119000.1 Wheat plasma membrane 75.86 75.05
HORVU2Hr1G022560.5 Barley mitochondrion 75.39 72.93
KRG91620 Soybean plasma membrane 59.2 70.81
GSMUA_Achr10P... Banana plasma membrane 57.18 69.51
CDX71911 Canola plasma membrane 53.07 67.84
CDY06021 Canola plasma membrane 53.14 67.7
VIT_16s0050g02480.t01 Wine grape plasma membrane 65.21 65.34
PGSC0003DMT400023487 Potato plasma membrane 64.26 65.01
Solyc03g007530.2.1 Tomato plasma membrane 64.19 64.89
VIT_16s0050g02280.t01 Wine grape cytosol, golgi, plasma membrane 56.64 64.37
KRH35194 Soybean endoplasmic reticulum, nucleus, plasma membrane 64.13 64.3
Solyc06g036490.1.1 Tomato plastid 50.51 62.78
KRH08764 Soybean plasma membrane 62.04 62.12
AT3G59140.1 Thale cress plasma membrane 59.81 61.05
Bra007434.1-P Field mustard golgi, plasma membrane, plastid 59.41 60.72
VIT_02s0025g00930.t01 Wine grape plasma membrane 56.37 59.59
KRH08755 Soybean plasma membrane 59.95 59.15
PGSC0003DMT400018927 Potato plasma membrane 50.3 59.07
PGSC0003DMT400074333 Potato mitochondrion 60.82 58.42
VIT_02s0025g00970.t01 Wine grape plasma membrane 58.26 57.99
VIT_02s0025g00950.t01 Wine grape plasma membrane 57.59 57.78
Solyc08g081890.2.1 Tomato endoplasmic reticulum, nucleus, plasma membrane 55.29 55.44
Os02t0288400-00 Rice plasma membrane 36.21 41.76
Os05t0196100-01 Rice plasma membrane 41.6 41.52
Os03t0142800-01 Rice plasma membrane 41.34 40.73
Os01t0902100-00 Rice plasma membrane 27.51 39.57
Os04t0209200-01 Rice plasma membrane 33.99 39.44
Os01t0173900-01 Rice plasma membrane 37.83 37.28
Os04t0588700-01 Rice cytosol, plasma membrane 33.24 36.98
Os01t0356400-01 Rice plasma membrane 36.41 35.36
Os04t0209300-01 Rice plasma membrane 35.33 34.66
Os04t0620000-01 Rice plasma membrane 29.27 26.67
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300EntrezGene:4340195UniProt:A0A0N7KLK4InterPro:AAA+_ATPase
InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:BAS96265.1GO:GO:0000166
GO:GO:0000325GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005774
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640EnsemblPlantsGene:Os06g0158900
EnsemblPlants:Os06t0158900-00InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893
PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF192SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0003939B8BRefSeq:XP_015644499.1RefSeq:XP_015644500.1SEG:seg:
Description
MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 15Similar to Multidrug-resistance associated protein 3. (Os06t0158900-00)
Coordinates
chr6:-:3001438..3009777
Molecular Weight (calculated)
165451.0 Da
IEP (calculated)
7.688
GRAVY (calculated)
0.209
Length
1483 amino acids
Sequence
(BLAST)
0001: MGSLISSWAM SLCGSPICSE QDVVSCAMKE TLDSSTCVNH LVVISIVAVL TVALVHQLLM KIPKSRASAR QLVAFNSLLQ LAAVVFTGCL GLLNLGLGLW
0101: MVGISFNQET SIYRPHWWLV ILAQGFSLIL TSFSFSIRPR FLGATFVRFW SLLLTICAAF ICCCSVVYMV GEKEITIKAC LDVLLLPGAL ILLLYAIRHS
0201: RDEEGYETTE NALYMPLNTE RDHGTADSES HVTPFAKAGF FSVMSFWWLN PLMKMGYAKP LEEKDMPLLG STDRAQNQYL MFLEMMNRKK QLQSHATPSV
0301: FWTIVSCHKS GILISGFFAL LKVVTLSSGP LLLKALINVS LGEGTFKYEG IVLAVTMFVC KFCESLAQRQ WYFRTRRLGL QVRSFLSAAI YKKQQKLSNS
0401: AKMKHSSGEI MNYVTVDAYR IGEFPYWFHQ IWTTSVQLCI ALAILYNAVG LATVSSLVVI IITVLCNAPL AKLQHKYQSK LMEAQDVRLK AMSESLVHMK
0501: VLKLYAWENH FKKVIEGLRE VEYKWLSAFN LRKAYNSFLF WSSPVLVSAA TFLTCYLLRV PLNASNVFTF VATLRLVQDP IRQIPDVIGV VIQAKVAFTR
0601: VVKFLDAPEL NGQCRKKYIA GTEYPIALNS CSFSWDENPS KHTLRNINLV VKSGEKVAIC GEVGSGKSTL LASVLGEVPK TEGTIQVCGK IAYVSQNAWI
0701: QTGTVQENIL FGSLMDEQRY KETLEKCSLE KDLAMLPHGD STQIGERGVN LSGGQKQRVQ LARALYQNAD IYLLDDPFSA VDAHTASSLF NEYVMGALSD
0801: KTVLLVTHQV DFLPVFDSIL LMSDGKIIRS APYQDLLEYC QEFQDLVNAH KDTIGISDLN NMPLHREKEI SMEETDDIHG SRYRESVKPS PADQLIKKEE
0901: REIGDTGLKP YILYLRQNKG FLYLSICVIS HIIFISGQIS QNSWMAANVQ NPSVSTLKLI VVYIAIGVCT LFFLLSRSLS IVVLGMQTSR SLFSQLLNSL
1001: FRAPMSFFDS TPLGRVLSRV SSDLSIVDLD VPFFFMFSIS ASLNAYSNLG VLAVITWQVL FISVPMIVLV IRLQRYYLAS AKELMRINGT TKSSLANHLG
1101: ESISGAITIR AFEEEDRFFA KNLELVDKNA GPCFYNFAAT EWLIQRLELM SAAVLSFSAL VMVILPPGTF SPGFVGMALS YGLSLNMSLV FSIQNQCNLA
1201: NQIISVERVN QYMDITSEAA EVIKENRPAP DWPQVGKVEL RDLKIKYRQD APLVLHGITC TFEGGHKIGI VGRTGSGKTT LIGGLFRLVE PAGGKIIIDS
1301: VDITTIGLHD LRSRLGIIPQ DPTLFQGTLR YNLDPLGQFS DQQIWEVLDK CQLLETVQEK EQGLDSLVVE DGSNWSMGQR QLFCLGRALL RRCRILVLDE
1401: ATASIDNATD AILQKTIRTE FKDCTVITVA HRIPTVMDCT MVLAMSDGKV VEYDKPTKLM ETEGSLFREL VKEYWSYASS GNV
Best Arabidopsis Sequence Match ( AT3G59140.1 )
(BLAST)
0001: MIENYWTSFC GNHHTSSNCT VRFLQICFGI TLSFLTLCIC LFHKEPPKRI HQFFCLRLVS ALFNGIIGSL DLVLGIWVLR ENHSKPLILW LVILIQGFTW
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR
Arabidopsis Description
ABCC10ABC transporter C family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYS2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.