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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d025043_P004 Maize plasma membrane, plastid 78.84 78.22
TraesCS2A01G057100.1 Wheat plasma membrane 76.39 76.9
HORVU2Hr1G009680.2 Barley plastid 55.89 76.26
TraesCS2A01G056900.1 Wheat plasma membrane, plastid 74.67 75.92
TraesCSU01G014100.1 Wheat plasma membrane 75.26 75.66
Os04t0209200-01 Rice plasma membrane 59.79 70.74
GSMUA_Achr2P02280_001 Banana cytosol, golgi, plasma membrane 44.51 58.32
VIT_07s0005g00260.t01 Wine grape plasma membrane 47.69 56.55
CDY23680 Canola plasma membrane 48.48 54.66
Os01t0356400-01 Rice plasma membrane 54.17 53.63
Bra032248.1-P Field mustard plasma membrane, plastid 49.74 52.19
CDX76656 Canola plasma membrane, plastid 50.99 52.13
CDY11440 Canola plastid 50.73 51.65
CDY43277 Canola plastid 50.73 51.2
PGSC0003DMT400016069 Potato endoplasmic reticulum, plasma membrane 46.43 51.17
KRH31883 Soybean plastid 50.79 51.17
AT2G47800.1 Thale cress plasma membrane 51.26 51.12
Solyc09g075020.2.1 Tomato plastid 51.12 51.09
Bra018722.1-P Field mustard plasma membrane, plastid 51.12 50.92
CDX93660 Canola plastid 51.06 50.86
PGSC0003DMT400029581 Potato plasma membrane 51.32 50.79
KRG96433 Soybean endoplasmic reticulum 50.4 50.66
KRH12057 Soybean endoplasmic reticulum 50.26 50.63
Bra007695.1-P Field mustard plastid 51.26 50.42
AT3G62700.1 Thale cress plasma membrane 51.06 50.16
KRH37107 Soybean endoplasmic reticulum 49.74 49.93
Solyc01g080640.2.1 Tomato plastid 48.61 49.07
Os02t0288400-00 Rice plasma membrane 34.46 40.51
Os01t0902100-00 Rice plasma membrane 27.31 40.06
Os03t0142800-01 Rice plasma membrane 37.76 37.94
Os01t0173900-01 Rice plasma membrane 37.57 37.74
Os04t0588700-01 Rice cytosol, plasma membrane 31.68 35.93
Os06t0158900-00 Rice plasma membrane 34.66 35.33
Os05t0196100-01 Rice plasma membrane 33.99 34.59
Os04t0620000-01 Rice plasma membrane 30.95 28.76
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300EntrezGene:4335177InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEMBL:AK120122ProteinID:BAF14166.1ProteinID:BAS88126.1
ProteinID:CAE04806.2GO:GO:0000166GO:GO:0000325GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005773GO:GO:0005774GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640EnsemblPlantsGene:Os04g0209300EnsemblPlants:Os04t0209300-01InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664
ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF230UniProt:Q7XM41
SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI000021C8DARefSeq:XP_015636527.1
SEG:seg:::::
Description
MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 10Similar to Glutathione-conjugate transporter AtMRP4. (Os04t0209300-01)
Coordinates
chr4:-:7317239..7325788
Molecular Weight (calculated)
164407.0 Da
IEP (calculated)
6.334
GRAVY (calculated)
0.237
Length
1512 amino acids
Sequence
(BLAST)
0001: MALLLPGWMA TTACSPPSGG SFPDLLAFLF LSPCPQRALL GAVDLVFVVA SLVVLALPRG GGGGAGDGPE REALLPKPRA SGRPFRVAVA LGASGVFAAA
0101: SAILLALALF LLPNTVWRVW ESAFLAVHFV AHAVAAWTIA SRRGAAGGAL PLQLRVFWVV TALVGALFSA SAAVRWAEDS LLFPDDPLAF AGLALSLPLV
0201: YVAITASSGE VAGTCEREPA DVTTAAEPST PYDAASWLSR ATFSWINPLV SKGYASDSLA AEDVPPVSPA HRAEASYARF VSNWPAQGSR YPVGVALWLS
0301: FWPRVLLTAA LGLVRLAAMY VGPSLINHFV DFISHGGTTW EGLRLVAILV AGKAVQTLAS HHYNFQGQLL GMRIRGALLT ALYRKSLRLS TGARRAHGSG
0401: AIVNYMQVDA GTVSYAMHGL HGLWLMPLQI VVALVLLYAY LGPSVLMTLA VITAVTVITA FANKLNLAYQ LKFLGVRDSR IKAITEMLNH MRVIKLQAWE
0501: EKFGGKVREL RQTEMGWLTK IVLFMCANNV VFSSGPLAMT VLVFGTYLAT GGELDAGKVF TATAFFSMLE GPMHNFPQTI VMCMQAFVSL GRLNKFLSDA
0601: EIDSTAVERI ASSAGDAAAV KVQNGVFAWD VPVEGAEDAR QGHGTENGRE EGPEMEMVLK GIEVEVRKGE LAAVVGTVGS GKSSLLSCIM GEMHKVSGTV
0701: SICGSTACVA QTAWIQNGTI QENILFGQPM HSERYREVIH ACCLEKDLEM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQDCDIYLLD DIFSAVDAHT
0801: GSAIFKECLK GILKKKTVLL VTHQVDFLKN VDTVFVMKDG VVIQSGSYNQ LLTSCSDFSV LVTAHHSSME VPGAAEQMSH DQTTEYSQDT TVPAKSPVKS
0901: NSSNENGGTS VAPSKEAGSS KLIEEEEKES GRVSWQVYKL YITEAWGWWG VLVILAVSVL SEGSSMASNY WLSYETSGGT IFDTSVFLGV YVSIVAASIV
1001: CDAISTLFVT FLGFKSAQVF FNKMFDSILR APMSFFDTTP SGRILSRASA DQMKIDTALV FYVGFATSMC ISVVSSIAVT CQVAWPSVIA VLPLVLLNIW
1101: YRNRYIATSR ELTRLQGVTR APVIDHFSET FLGAPTVRCF GKEDEFYQIN LDRINSNLRM SFHNYGANEW LGFRLELIGT LLLSITAFLM ISLPSNFIKK
1201: EFVGMSLSYG LSLNSLVYYT ISMTCMIEND MVAVERVNQY STLPSEAAWE VADCLPSPNW PRRGDIDVKD LKVRYRSNTP LILKGITISI NSGEKIGVVG
1301: RTGSGKSTLV QALFRLVEPV EGHIIVDGVD IGTLGLHDLR SRFGVIPQEP VLFEGTIRSN IDPIGRYSED EIWQALERCQ LKDIVATKPE KLDALVADMG
1401: ENWSVGQKQL LCFGRVILKR SRILFMDEAT ASVDSQTDAT IQRIIREEFT DCTIISIAHR IPTVMDSDRV LVLDAGLVKE FDEPSKLMGR PSLFRAMVQE
1501: YANRSYSTEA RD
Best Arabidopsis Sequence Match ( AT2G47800.1 )
(BLAST)
0001: MWLLSSSPWL SELSCSYSAV VEHTSSVPVP IQWLRFVLLS PCPQRALFSA VDFIFLLCFA LHKLFSSPSS SSEINGHAEI RKPLIGIRGR TPTRTTAWFK
0101: TTVAVTVLLS FCSVVLCVLA FTGKRRTQRP WNLIDPLFWL IHAVTHLVIA VLVLHQKRFA ALNHPLSLRI YWISSFVLTS LFAVTGIFHF LSDAATSLRA
0201: EDVASFFSFP LTAFLLIASV RGITGLVTAE TNSPTKPSDA VSVEKSDNVS LYASASVFSK TFWLWMNPLL SKGYKSPLTL EQVPTLSPEH KAERLALLFE
0301: SSWPKPSENS SHPIRTTLLR CFWKEILFTA ILAIVRLGVM YVGPVLIQSF VDFTSGKRSS PWQGYYLVLI LLVAKFVEVL TTHQFNFDSQ KLGMLIRSTL
0401: ITALYKKGLK LTGSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTVALVLLY GSLGASVITA VIGLTGVFVF ILLGTQRNNG YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL KFRDMEFGWL SKFLYSIAGN IIVLWSTPVL ISALTFATAL ALGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSEDAVE RALGCDGNTA VEVRDGSFSW DDEDNEPALS DINFKVKKGE LTAIVGTVGS GKSSLLASVL GEMHRISGQV
0701: RVCGSTGYVA QTSWIENGTV QDNILFGLPM VREKYNKVLN VCSLEKDLQM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQECDVYLLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMRDG KIVESGKYDE LVSSGLDFGE LVAAHETSME LVEAGADSAA VATSPRTPTS PHASSPRTSM
0901: ESPHLSDLND EHIKSFLGSH IVEDGSKLIK EEERETGQVS LGVYKQYCTE AYGWWGIVLV LFFSLTWQGS LMASDYWLAY ETSAKNAISF DASVFILGYV
1001: IIALVSIVLV SIRSYYVTHL GLKTAQIFFR QILNSILHAP MSFFDTTPSG RILSRASTDQ TNVDILIPFM LGLVVSMYTT LLSIFIVTCQ YAWPTAFFVI
1101: PLGWLNIWYR NYYLASSREL TRMDSITKAP IIHHFSESIA GVMTIRSFRK QELFRQENVK RVNDNLRMDF HNNGSNEWLG FRLELVGSWV LCISALFMVL
1201: LPSNVIRPEN VGLSLSYGLS LNSVLFFAIY MSCFVENKMV SVERIKQFTD IPSESEWERK ETLPPSNWPF HGNVHLEDLK VRYRPNTPLV LKGITLDIKG
1301: GEKVGVVGRT GSGKSTLIQV LFRLVEPSGG KIIIDGIDIS TLGLHDLRSR FGIIPQEPVL FEGTVRSNID PTEQYSDEEI WKSLERCQLK DVVATKPEKL
1401: DSLVVDNGEN WSVGQRQLLC LGRVMLKRSR LLFLDEATAS VDSQTDAVIQ KIIREDFASC TIISIAHRIP TVMDGDRVLV IDAGKAKEFD SPARLLERPS
1501: LFAALVQEYA LRSAGI
Arabidopsis Description
ABCC4ABC transporter C family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DM58]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.