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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 5
  • endoplasmic reticulum 2
  • plasma membrane 3
  • extracellular 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:plasma membrane
plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009243_P001 Maize mitochondrion 77.34 78.26
KXG32483 Sorghum plasma membrane 76.75 77.51
TraesCS5A01G467600.1 Wheat plasma membrane 75.77 76.88
TraesCS5B01G479900.1 Wheat golgi 75.77 76.78
TraesCS5D01G480600.1 Wheat plasma membrane 75.7 76.76
GSMUA_Achr2P02280_001 Banana cytosol, golgi, plasma membrane 51.28 67.85
VIT_07s0005g00260.t01 Wine grape plasma membrane 54.81 65.65
CDY23680 Canola plasma membrane 54.49 62.04
Os04t0209200-01 Rice plasma membrane 51.15 61.11
CDX76656 Canola plasma membrane, plastid 58.81 60.72
CDY11440 Canola plastid 58.55 60.2
KRH31883 Soybean plastid 58.94 59.96
CDY43277 Canola plastid 58.55 59.68
AT2G47800.1 Thale cress plasma membrane 59.0 59.43
Bra018722.1-P Field mustard plasma membrane, plastid 58.87 59.22
CDX93660 Canola plastid 58.81 59.16
Bra032248.1-P Field mustard plasma membrane, plastid 55.8 59.13
Solyc09g075020.2.1 Tomato plastid 58.09 58.63
Bra007695.1-P Field mustard plastid 58.87 58.49
PGSC0003DMT400016069 Potato endoplasmic reticulum, plasma membrane 52.46 58.38
PGSC0003DMT400029581 Potato plasma membrane 58.28 58.25
AT3G62700.1 Thale cress plasma membrane 58.55 58.09
KRG96433 Soybean endoplasmic reticulum 56.65 57.51
Solyc01g080640.2.1 Tomato plastid 54.88 55.94
KRH12057 Soybean endoplasmic reticulum 54.88 55.83
KRH37107 Soybean endoplasmic reticulum 54.62 55.38
Os04t0209300-01 Rice plasma membrane 53.63 54.17
Os02t0288400-00 Rice plasma membrane 35.1 41.68
Os01t0902100-00 Rice plasma membrane 26.92 39.86
Os03t0142800-01 Rice plasma membrane 39.03 39.6
Os01t0173900-01 Rice plasma membrane 37.52 38.07
Os05t0196100-01 Rice plasma membrane 35.95 36.94
Os04t0588700-01 Rice cytosol, plasma membrane 31.89 36.53
Os06t0158900-00 Rice plasma membrane 35.36 36.41
Os04t0620000-01 Rice plasma membrane 30.19 28.33
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300EntrezGene:4326284InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEMBL:AK242094ProteinID:BAD52758.1ProteinID:BAS72067.1
ProteinID:CAD59596.1GO:GO:0000166GO:GO:0000325GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005773GO:GO:0005774GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640EnsemblPlantsGene:Os01g0356400EnsemblPlants:Os01t0356400-01InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664
ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF215UniProt:Q8GU64
SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI00000AE28CRefSeq:XP_015611347.1
SEG:seg:::::
Description
MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 8Similar to multidrug resistance protein ABC transporter family. (Os01t0356400-01)
Coordinates
chr1:-:14340326..14357449
Molecular Weight (calculated)
167650.0 Da
IEP (calculated)
7.966
GRAVY (calculated)
0.215
Length
1527 amino acids
Sequence
(BLAST)
0001: MDLASSSSAA PAPPWWLTSR TCDVLPSASP SSSGFAEWAA FLFLSDCSQR VLLSALASLF LLLLLCFALR RAVSSSSSSR RRRGGADGID GDDGKRPLLH
0101: RPGPAPAVRV GVGYVVALSA SLALAVFYAV LLVLSLVTRG GGGGVLEPVF LALQCAAHLA AAAVVAHEKR FRAVHHPLTL RLFWLAASAL AVLLAGSAIA
0201: RLASGAAALP DDALAIAVLV LSLPLPLLAI AGATGITVVV AAAESSHEEG AEGNGNGEDV RDYKNVTLYA TASWPSRLMW AWMHPLLKRG YRAALDLTDV
0301: PTLAPEHRPE RMYELFLSNW PAAWATKDNN PVRHALLRCF WPLFLLNASL AVLRLTVMYV GPTLIQSFVD FTSASPRRPL WDGVRLVAAL LAAKTAEAFC
0401: SHQYNFHCQK LGMQIRGALI TALYRKGLRL SCSARQKHGL GMIVNYMAVD AQQLSDMMLQ IHYLWLMPLQ VGVALGLLYL YLGPPVTAAL GGVVAVMMFV
0501: LAGARRNNRY QFRLMTERDK RMKATNEMLN YMRVIKFQAW EEHFSARIEA FRRGEFGWLT RFMYSISGNI IALWSAPIAI AALVFATSVL LGVRLDAGLV
0601: FTATSFFKIL QEPMRNFPQS IIQVSQAMVS LGRLDSYMTS AELDEGAVER GPAVGAGMTA VRVRGGEFAW EEEEEAAGQQ AVLRGIDIDV RAGTLAAVVG
0701: MVGSGKSSLL GCILGEMRKI SGEVTVRGSM AYVPQTAWIQ NGTIEENILF GRGMQRERYR EAIRVCSLDK DLEMMEFGDQ TEIGERGINL SGGQKQRIQL
0801: ARAVYQDADV YLLDDVFSAV DAHTGSDIFR DCVRGALRDK TVLLVTHQLD FLRNAHAIYV MRDGAVAQSG RYHDLLRTGT DFAALVAAHE SSMELVESAA
0901: PGPSPSPAGN LPLSRQPSSA PKERESASSN GDIKTAKASS RLIKAEERAS GHVSFTVYRQ YMTEAWGWWG LMLVLAVSVA WQGSTMAADY WLAYQTSGDA
1001: FRPALFIKVY AIIAAVSVVI VTVRSLLVAT IGLDTANIFF RQVLSTILHA PMSFFDTTPS GRILTRASSD QTNVDLLLPF FVWMSVSMYI TVIGVVIMTC
1101: QVAWPSVVLV VPLLMLNLWF RKYYISTSRE LTRLESITKA PVIHHFSETV QGVMVIRCFQ KQDNFFHENL SRLNASLKMD FHNNAANEWL GLRLELIGSL
1201: VLCVTALLMV TLPSNIVLPE YVGLSLSYGL SLNSVMFWAI WLSCNIENKM VSVERIKQFT NIPSEAEWRI KETAPSANWP HKGDIDIIDL KFRYRHNTPL
1301: VLKGITLSIH GGEKIGVVGR TGSGKSTLIQ ALFRIVEPSE GKIIIDGIDI CTLGLHDLRS RFGIIPQEPV LFEGTIRSNI DPLQLYSDDE IWQALERCQL
1401: KDAVTSKPEK LDASVVDNGE NWSVGQRQLL CLGRVMLKHS RILFMDEATA SVDSRTDAVI QKIIREEFSA CTIISIAHRI PTVMDCDRVL VIDAGLAKEF
1501: DSPANLIERP SLFGALVQEY ATRSSDI
Best Arabidopsis Sequence Match ( AT2G47800.1 )
(BLAST)
0001: MWLLSSSPWL SELSCSYSAV VEHTSSVPVP IQWLRFVLLS PCPQRALFSA VDFIFLLCFA LHKLFSSPSS SSEINGHAEI RKPLIGIRGR TPTRTTAWFK
0101: TTVAVTVLLS FCSVVLCVLA FTGKRRTQRP WNLIDPLFWL IHAVTHLVIA VLVLHQKRFA ALNHPLSLRI YWISSFVLTS LFAVTGIFHF LSDAATSLRA
0201: EDVASFFSFP LTAFLLIASV RGITGLVTAE TNSPTKPSDA VSVEKSDNVS LYASASVFSK TFWLWMNPLL SKGYKSPLTL EQVPTLSPEH KAERLALLFE
0301: SSWPKPSENS SHPIRTTLLR CFWKEILFTA ILAIVRLGVM YVGPVLIQSF VDFTSGKRSS PWQGYYLVLI LLVAKFVEVL TTHQFNFDSQ KLGMLIRSTL
0401: ITALYKKGLK LTGSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTVALVLLY GSLGASVITA VIGLTGVFVF ILLGTQRNNG YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL KFRDMEFGWL SKFLYSIAGN IIVLWSTPVL ISALTFATAL ALGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSEDAVE RALGCDGNTA VEVRDGSFSW DDEDNEPALS DINFKVKKGE LTAIVGTVGS GKSSLLASVL GEMHRISGQV
0701: RVCGSTGYVA QTSWIENGTV QDNILFGLPM VREKYNKVLN VCSLEKDLQM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQECDVYLLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMRDG KIVESGKYDE LVSSGLDFGE LVAAHETSME LVEAGADSAA VATSPRTPTS PHASSPRTSM
0901: ESPHLSDLND EHIKSFLGSH IVEDGSKLIK EEERETGQVS LGVYKQYCTE AYGWWGIVLV LFFSLTWQGS LMASDYWLAY ETSAKNAISF DASVFILGYV
1001: IIALVSIVLV SIRSYYVTHL GLKTAQIFFR QILNSILHAP MSFFDTTPSG RILSRASTDQ TNVDILIPFM LGLVVSMYTT LLSIFIVTCQ YAWPTAFFVI
1101: PLGWLNIWYR NYYLASSREL TRMDSITKAP IIHHFSESIA GVMTIRSFRK QELFRQENVK RVNDNLRMDF HNNGSNEWLG FRLELVGSWV LCISALFMVL
1201: LPSNVIRPEN VGLSLSYGLS LNSVLFFAIY MSCFVENKMV SVERIKQFTD IPSESEWERK ETLPPSNWPF HGNVHLEDLK VRYRPNTPLV LKGITLDIKG
1301: GEKVGVVGRT GSGKSTLIQV LFRLVEPSGG KIIIDGIDIS TLGLHDLRSR FGIIPQEPVL FEGTVRSNID PTEQYSDEEI WKSLERCQLK DVVATKPEKL
1401: DSLVVDNGEN WSVGQRQLLC LGRVMLKRSR LLFLDEATAS VDSQTDAVIQ KIIREDFASC TIISIAHRIP TVMDGDRVLV IDAGKAKEFD SPARLLERPS
1501: LFAALVQEYA LRSAGI
Arabidopsis Description
ABCC4ABC transporter C family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DM58]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.