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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009243_P001 Maize mitochondrion 94.64 94.83
TraesCS5A01G467600.1 Wheat plasma membrane 83.53 83.92
TraesCS5D01G480600.1 Wheat plasma membrane 83.27 83.6
TraesCS5B01G479900.1 Wheat golgi 83.27 83.54
Os01t0356400-01 Rice plasma membrane 77.51 76.75
GSMUA_Achr2P02280_001 Banana cytosol, golgi, plasma membrane 55.16 72.27
VIT_07s0005g00260.t01 Wine grape plasma membrane 58.27 69.1
CDY23680 Canola plasma membrane 57.41 64.73
CDX76656 Canola plasma membrane, plastid 61.38 62.75
KRH31883 Soybean plastid 62.1 62.56
CDY11440 Canola plastid 61.24 62.36
CDY43277 Canola plastid 61.44 62.02
Bra032248.1-P Field mustard plasma membrane, plastid 58.73 61.62
Solyc09g075020.2.1 Tomato plastid 61.64 61.6
Bra018722.1-P Field mustard plasma membrane, plastid 61.84 61.59
CDX93660 Canola plastid 61.71 61.46
PGSC0003DMT400029581 Potato plasma membrane 61.9 61.26
KRG96433 Soybean endoplasmic reticulum 60.85 61.17
AT2G47800.1 Thale cress plasma membrane 61.11 60.95
AT3G62700.1 Thale cress plasma membrane 61.71 60.62
Bra007695.1-P Field mustard plastid 61.51 60.51
PGSC0003DMT400016069 Potato endoplasmic reticulum, plasma membrane 54.7 60.28
EES10452 Sorghum plastid 60.91 59.46
KRH12057 Soybean endoplasmic reticulum 57.34 57.76
Solyc01g080640.2.1 Tomato plastid 57.08 57.61
KRH37107 Soybean endoplasmic reticulum 57.08 57.3
KXG31741 Sorghum plasma membrane 36.64 44.21
OQU92792 Sorghum plasma membrane 37.63 41.5
OQU93255 Sorghum plasma membrane 40.01 40.01
EES17847 Sorghum endoplasmic reticulum, plasma membrane, vacuole 33.6 38.72
KXG40096 Sorghum plasma membrane 37.96 37.99
KXG25638 Sorghum plasma membrane 36.51 37.65
OQU80926 Sorghum plasma membrane 36.51 37.25
KXG26126 Sorghum plasma membrane 36.64 37.23
KXG19351 Sorghum plasma membrane 36.18 36.86
OQU86956 Sorghum plasma membrane 34.66 36.24
KXG20196 Sorghum plasma membrane 35.52 35.87
KXG27008 Sorghum plasma membrane 37.5 35.55
EES12878 Sorghum plasma membrane 30.75 28.58
EER89345 Sorghum plasma membrane 27.51 28.4
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300UniProt:A0A1B6Q3I9InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640EnsemblPlants:KXG32483ProteinID:KXG32483ProteinID:KXG32483.1
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24223PANTHER:PTHR24223:SF215SMART:SM00382EnsemblPlantsGene:SORBI_3003G160200SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI00081ACF19SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:-:18780562..18803440
Molecular Weight (calculated)
166550.0 Da
IEP (calculated)
7.310
GRAVY (calculated)
0.174
Length
1512 amino acids
Sequence
(BLAST)
0001: MALLSLQPPW WLTTEACDLP SAGLGEWAAF LFLSTCSQRM LLSAASAVFL VALLCLGAAK LISTRRRRRS HALNGQDKQP LLDRDRDRDG VRVGAGFVVA
0101: LAASGALAAF YAVLLVLSLV NRAGEALEAV FLALQCTAHL AGAAVVAHEK RFRAATHPLT LRLYWLAAPA LTALLTGTSV ARLVSGAGRL PDDALAVAAL
0201: VLSLPLPLLS ILGSTGVVSA VVVNDDDDAT GADAAAAAAT EKNVTPYASA SWLSRATWAW MNPLVQRGYR SALELSDVPT LAPSHRPERM HQLFTLHWPS
0301: SWASKENNPV RHTLFRTFWA QFLLNASLAL LRLTVMYVGP TLIQSFVDFT SAGAGQRPRG EGARLVATLL AAKCAEALCS HQYNFHCQKL GMQIRGALIV
0401: ALYRKGLRLS CSARQKHGLG MIVNYMAVDA QQLSDMMLQI HYLWLMPLQV GVALGLLYTY LGPPVTSALV GVAGVMVFVL LGTRRNNRYQ FSLMKERDQR
0501: MKATNEMLNY MRVIKFQAWE EHFNARIGRF RRQEFGWLSR FMYSISGNII ALWSAPVVVS ALVFATCVLA GGVRLDAGLV FTATSFFKIL QEPMRNFPQA
0601: MIQASQAMIS LQRLDSYMTS AELDEGAVER EPAAASGCDG MAVQVKDGVF AWDDEVDAGQ EVLRGIDLNI RTGALAAVVG MVGSGKSSLL GCILGEMRKI
0701: SGKVKVCGST AYVAQTAWIQ NGTIEENILF GKPMHRERYK EVIRVCCLEK DLEMMEFGDQ TEIGERGINL SGGQKQRIQL ARAVYQDCDI YLLDDVFSAV
0801: DAHTGTEIFK ECVRGALKNK TIVLVTHQVD FLHNADIIYV MKDGMIVQSG KYDELLQAGT DFAALVAAHD SSMELVESAA PASERELPLS RQPSNKNADG
0901: RASNGDSSSS SIVAPKAEKA SARLIKEEER ASGHVSFTVY KQYMTEAWGW WGPLVVVVVS VVWQGSLMAS DYWLADQTSE ENASSFQPSL FINVYAIIAA
1001: VSVVLVAARS FLVAFIGLQT ADRFFKQILN SILHAPMSFF DTTPSGRILS RASSDQTNVD LFLPFFVWMS VSMYITVISV LIVTCQVAWP SVIAIIPLVI
1101: LNIWYRGYYL STSRELTRLE SITKAPVIHH FSETVQGVMT IRCFRKEDSF LQENLNRVNS SLRMDFHNNG ANEWLGFRLE LIGSFVLCFT AVMMVTLPSS
1201: IVKPEYVGLS LSYGLSLNQV LFWAIWISCF IENKMVSVER IKQFTNIPSE AAWRIKDCLP DSNWPTKGDI DVIDLKFRYR HNTPLVLKGI TISIHGGEKI
1301: GVVGRTGSGK STLIQALFRI VEPSEGRIVI DGVDICTLGL HDLRSRFGII PQEPVLFEGT IRSNIDPLEQ YSDDEIWQAL DRCQLKEAVA SKPEKLDASV
1401: VDNGENWSVG QRQLLCLGRV MLKRSRILFM DEATASVDSQ TDAVIQKIIR EDFAACTIIS IAHRIPTVMD CDRVLVIDAG LAKEFDRPAN LIERPSLFGA
1501: LVQEYANRSS DV
Best Arabidopsis Sequence Match ( AT3G62700.1 )
(BLAST)
0001: MRWLSSTWLS DLSCSSSSVI EPSSSLPAPI QWLRFILLSP CPQRLLSSTV DVLFLLILFF FAIQKLCSSS SSRTNGEADI TKPLLGRRTR TRTTGLFKTT
0101: VVVTIVLSFC SLVLCVSAFF TTRTKLKLVD TLFWLIHAVT NVVIAVLVLH LKRFASPSHP LTLRIYWVFN FVVTTLFTVS GILHLLSDDP AAASLRADDV
0201: ASFISFPLTA VLLLVSIKGS TGVVVTTSNV TAPAKSNDVV VEKSENVSLY ASASFISKTF WLWMNPLLRK GYKSPLNLDQ VPTLSPEHRA EKLATLFESK
0301: WPKPQENSRN PVRTTLIRCF WKEIAFTAVL AIIRLSVIYV GPVLIQSFVD FTSGKRSSPS QGYYLVLILL IAKFVEVLST HQFNFNSQKL GMLIRSTLIT
0401: ALYKKGLKLT GSARQNHGVG QIVNYMAVDA QQLSDMMLQL HAIWLMPLQV AAAIVLLYNT LGPSVVTTVI GLTGIFVFIL LGTKRNNRYQ FSLMMNRDSR
0501: MKATNEMLNY MRVIKFQAWE DHFNERILKF REMEFGWLSK FLYSIAGNII VLWSTPVLIS ALTFTTAVFL GVKLDAGTVF TTTTIFKILQ EPIRTFPQSM
0601: ISLSQAMISL GRLDAYMMSR ELSEETVERS QGCDGNVAVE IKDGSFSWDD EDDEPAIENI NFEVKKGELA AIVGTVGSGK SSLLASVLGE MHKLSGKVRV
0701: CGTTAYVAQT SWIQNGTVQD NILFGLPMNR SKYNEVLKVC CLEKDMQIME FGDQTEIGER GINLSGGQKQ RIQLARAVYQ ESDVYLLDDV FSAVDAHTGS
0801: DIFKKCVRGA LKGKTILLVT HQVDFLHNVD RILVMRDGMI VQSGKYDELV SSGLDFGELV AAHETSMELV EAGSASATAA NVPMASPITQ RSISIESPRQ
0901: PKSPKVHRTT SMESPRVLRT TSMESPRLSE LNDESIKSFL GSNIPEDGSR LIKEEEREVG QVSFQVYKLY STEAYGWWGM ILVVFFSVAW QASLMASDYW
1001: LAYETSAKNE VSFDATVFIR VYVIIAAVSI VLVCLRAFYV THLGLKTAQI FFKQILNSLV HAPMSFFDTT PSGRILSRAS TDQTNVDIFI PFMIGLVATM
1101: YTTLLSIFIV TCQYAWPTVF FIIPLGWLNI WYRGYYLASS RELTRLDSIT KAPVIHHFSE SIAGVMTIRA FKKQPMFRQE NVKRVNANLR MDFHNNGSNE
1201: WLGFRLELIG SWVLCISALF MVMLPSNIIK PENVGLSLSY GLSLNGVLFW AIYLSCFIEN KMVSVERIKQ FTDIPAEAKW EIKESRPPPN WPYKGNIRLE
1301: DVKVRYRPNT PLVLKGLTID IKGGEKIGVV GRTGSGKSTL IQVLFRLVEP SGGKIIIDGI DICTLGLHDL RSRFGIIPQE PVLFEGTVRS NIDPTEKYSD
1401: EEIWKSLERC QLKDVVASKP EKLDSLVADN GENWSVGQRQ LLCLGRVMLK RSRILFLDEA TASVDSQTDA MIQKIIREDF SDCTIISIAH RIPTVMDCDR
1501: VLVIDAGKAK EYDSPVRLLE RQSLFAALVQ EYALRSAGI
Arabidopsis Description
ABCC14ABC transporter C family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZJ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.