Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G269700.1 Wheat cytosol, golgi, plasma membrane 81.3 82.62
TraesCS7A01G358100.1 Wheat plasma membrane 80.83 82.2
TraesCS7D01G364700.1 Wheat cytosol, golgi, plasma membrane 80.76 82.08
TraesCS6D01G000300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 68.6 81.7
HORVU7Hr1G088210.25 Barley plasma membrane 80.36 81.56
GSMUA_Achr10P... Banana plasma membrane 54.38 66.72
EES17847 Sorghum endoplasmic reticulum, plasma membrane, vacuole 54.91 62.65
VIT_09s0002g02440.t01 Wine grape plasma membrane 52.77 60.44
KRH47149 Soybean plasma membrane 54.84 56.08
CDY06441 Canola plasma membrane 54.64 55.84
Bra031267.1-P Field mustard plasma membrane 54.51 55.74
CDY27531 Canola plasma membrane 52.64 55.49
CDY37305 Canola plasma membrane 52.57 55.42
Bra023893.1-P Field mustard plasma membrane 53.24 55.08
Solyc12g044820.1.1 Tomato plasma membrane 53.44 54.87
PGSC0003DMT400083884 Potato plasma membrane 53.17 54.6
AT3G21250.4 Thale cress plasma membrane 53.57 54.56
KXG31741 Sorghum plasma membrane 37.81 45.17
OQU92792 Sorghum plasma membrane 39.68 43.33
OQU80926 Sorghum plasma membrane 41.22 41.63
KXG19351 Sorghum plasma membrane 40.75 41.11
KXG25638 Sorghum plasma membrane 40.21 41.06
KXG40096 Sorghum plasma membrane 39.95 39.58
OQU93255 Sorghum plasma membrane 39.75 39.35
OQU86956 Sorghum plasma membrane 36.21 37.48
KXG26126 Sorghum plasma membrane 36.14 36.36
KXG32483 Sorghum plasma membrane 35.87 35.52
KXG27008 Sorghum plasma membrane 36.54 34.29
EES10452 Sorghum plastid 35.27 34.09
VIT_09s0002g02430.t01 Wine grape plasma membrane 56.91 28.98
EES12878 Sorghum plasma membrane 30.46 28.03
EER89345 Sorghum plasma membrane 25.99 26.55
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300UniProt:A0A194YKS3InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640EnsemblPlants:KXG20196ProteinID:KXG20196ProteinID:KXG20196.1
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24223PANTHER:PTHR24223:SF321SMART:SM00382EnsemblPlantsGene:SORBI_3010G169000SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0007F31A5DSEG:seg:::
Description
hypothetical protein
Coordinates
chr10:+:49892288..49898836
Molecular Weight (calculated)
163902.0 Da
IEP (calculated)
7.884
GRAVY (calculated)
0.216
Length
1497 amino acids
Sequence
(BLAST)
0001: MSAAAMADNG DPAMALLGWS SSWICGGEDD DGGRLTVASP CVQRTLIDCV NVVLLVAYVS TLAVAAACVR RRQRAATATA ASRRSGAPGS GWVLLVVSSC
0101: CVAAAVAYGV TGLQDASDVR AAVPYFVRAL VWIALAASLH VRPTRPARAV AVLWWVLFSL LVTAYNVEIL AGGHGLDLAE TISWPVSLLL LLCALGSLLR
0201: RGHGDASNDS GGLSEPLIGG KDDRAAVPTS ELYRAGLFGQ LAFSWLNPLL RVGRSKALDL GDIPLIADED TAHHTSQKFA EDWSRHVGDK ARSRRRVVGS
0301: NSLALVLLKC FLGEILLTGF YALLRTLSIA VAPLLLFAFV WYSNQEERDL RVGLVLVGCL LITKLIESLS QRHWFFTSRR TGMRIRSALM AVIFQKQLRL
0401: SSQGRKNHST GEIVNYIAVD AYRLGDAISW LHMGWSSPLQ LVFSVATLFW ALKLGALPGL VPLVIFGFLN VPFAKMLQGY QAKFMVAQDE RLRSTSEILN
0501: SMKIIKLQSW EDKFRQMIES LRDGEFKWLK ETQMKKAYGA VMYWMSPTVV SAVMYTATAI MGSAPLNAST LFTVLATLRV MAEPVRFLPE ILTMMIQYKV
0601: SLDRIEKFLL EDEIREEDVK RVPSDNSDVR VQVQDGNFSW KATGADLSLR NVNLRINRGE KVAVCGPVGS GKSSLLYALL GEIPRISGSV AVFGSVAYVS
0701: QSSWIQSGTV RDNILFGKPF HKELYDKAIK SCALDKDIEN FDHGDLTEIG QRGLNMSGGQ KQRIQLARAV YNDADVYLLD DPFSAVDAHT AAVLFYECVM
0801: TALAEKTVVL VTHQVEFLTE TNRILVMEGG QVSQQGKYSE LLGSGTAFEK LVSAHEASIT ALDTSASQQN QDQGQQAFDE YIVPSALQVI RQASDIEVTA
0901: KGPSAAIQLT EEEEKGIGDL GWKPYKDYIN VPKAAFQFSG MCTSQVLFTC FQIASTYWLA VAVQMDSVSA ALLVGAYSGL SIFSCCFAYF RSLFAANLGL
1001: KASKAFFGGL MDSVFKAPMS FFDSTPVGRI LTRASSDLSI LDFDIPYSMA FVATGAIEVV TTVLVMGTVT WQVLVVAIPV AITMIYVQRY YVSSARELVR
1101: INGTTKAPVM NYASESILGV VTIRAFAATE RFIHSNMQLI DTDATLFFHT VAAQEWVLIR VEALQSLTII TAALFLVLVP PGAISPGFAG LCLSYALTLT
1201: AAQVFLTRFY SYLENYIISV ERIKQYMHLP VEPPAIIPEN RPPTSWPQEG RIDLQDLKIR YRPNAPLVLK GITCTFSAGN KIGVVGRTGS GKSTLISSLF
1301: RLVDPAGGKI LIDKLDICSI GLKDLRTKLS IIPQEPTLFR GTVRTNLDPL GLHSDQEIWE ALEKCQLKTA ISSTSALLDT VVSDDGDNWS AGQRQLFCLG
1401: RVLLRRNKIL VLDEATASID SATDAILQKV IRQQFSSCTV ITIAHRVPTV TDSDRVMVLS YGKLLEYETP AKLLEDKQSA FAKLVAEYWA NTKRNST
Best Arabidopsis Sequence Match ( AT3G21250.2 )
(BLAST)
0001: MAAFIGSLPW CDVELNLASS CFQRTAIAFV NLLFLCIFYL FLIASCVSTH FIVRGRKKGW IFVAVAICCA ITSFIFLGVG LNSLIHGGND VTEISWVACF
0101: VEGIIWVSLA VSLLVNGSKW VNILVSVWWV SFALLDLVAK SGILLQGNGI RILDILTLPM SLLLLLCSWM NLRSSSAAAQ DCSVTGLSDP LLTKNPRKES
0201: ARLATAGFFS ILSFSWMNPL LSLGFKKPLS PEDIPSVVPE DEAQLAYKKF SQAWDTLLGD ESSTKERNLV FRAVVKVYFK ENIFIAVFAF LRTFAVVSLP
0301: LMLYVFVDYA NSDHRDLRNG FFNLACLVML KLVESLTMRH WYFASRRSGM RIRSALMVAA YKKQLKLSSL GRKRHSSGEI VNYIAVDAYR MGEFLWWFHS
0401: GWSLSLQLLL STAVLFGVVG AGAFPGLILL LLCGLLNLPF AKMLQNCQTQ FMIAQDKRLR STSEILNSMK VIKLQSWEDE FKKKIESCRD DEFTWLAKAQ
0501: LTKAFGSFLY WMSPTIVSSV VFLGCALLKS APLNASTIFT VLATLRVMSE PVKIIPDAIS AIIQGNVSFQ RLNNFLLDDE LKMDEIERSG LDASGTAVDI
0601: QVGNFGWEPE TKIPTLRNIH LEIKHGQKVA VCGPVGAGKS SLLHAVLGEI PKVSGTVKVF GSIAYVSQTS WIQSGTIRDN ILYGKPMESR RYNAAIKACA
0701: LDKDMNGFGH GDLTEIGQRG INLSGGQKQR IQLARAVYAD ADVYLLDDPF SAVDAHTAGV LFHKCVEDSL KEKTVILVTH QVEFLSEVDQ ILVMEEGTIT
0801: QSGKYEELLM MGTAFQQLVN AHNDAVTVLP LASNESLGDL RKEGKDREIR NMTVVEKIEE EIEKTDIPGV QLTQEEEKES GYVGMKPFLD YIGVSRGWCL
0901: LWSSVLGQVG FVVFQAASTY WLAFAIGIPK ITNTMLIGVY SIISTLSAGF VYARAITTAH LGLKASKAFF SGFTNAVFKA PMLFFDSTPV GRILTRASSD
1001: LNVLDYDVPF AFIFVVAPAV ELTAALLIMT YVTWQVIIIA LLALAATKVV QDYYLASARE LIRINGTTKA PVMNYAAETS LGVVTIRAFG TAERFFKNYL
1101: NLVDADAVLF FLSNAAMEWV ILRIETLQNV TLFTCALLLI LIPKGYIAPG LVGLSLSYAL TLTQTQVFLT RWYCTLSNSI ISVERIKQYM NIPEEPPAII
1201: DDKRPPSSWP SNGTIHLQEL KIRYRPNAPL VLKGISCTFR EGTRVGVVGR TGSGKSTLIS ALFRLVEPAS GCILIDGIDI SKIGLKDLRM KLSIIPQEPT
1301: LFRGCIRTNL DPLGVYSDDE IWKALEKCQL KTTISNLPNK LDSSVSDEGE NWSVGQRQLF CLGRVLLKRN KILVLDEATA SIDSATDAII QRIIREEFAD
1401: CTVITVAHRV PTVIDSDMVM VLSFGDLVEY NEPSKLMETD SYFSKLVAEY WASCRGNSSQ NLQL
Arabidopsis Description
MRP6Multidrug resistance-associated protein 6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPV5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.