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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002503_P001 Maize plasma membrane 91.66 94.94
Zm00001d026041_P005 Maize plasma membrane 77.37 92.37
HORVU2Hr1G105430.1 Barley cytosol, peroxisome, plasma membrane 79.5 82.44
TraesCS2B01G473000.1 Wheat endoplasmic reticulum 76.49 81.39
TraesCS2A01G451500.1 Wheat plasma membrane 77.87 80.81
TraesCS2A01G451300.1 Wheat plastid 79.62 80.08
KXG26126 Sorghum plasma membrane 73.92 79.23
TraesCS2D01G451100.2 Wheat cytosol 80.63 79.09
TraesCS2B01G472800.1 Wheat cytosol, peroxisome, plasma membrane 79.75 76.58
PGSC0003DMT400011214 Potato cytosol 7.4 71.08
PGSC0003DMT400080270 Potato mitochondrion 49.34 68.61
AT3G60970.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 44.64 67.62
VIT_15s0021g00220.t01 Wine grape plasma membrane 59.25 62.58
KRH48930 Soybean endoplasmic reticulum 57.3 60.81
Bra003402.1-P Field mustard plastid 56.11 59.91
PGSC0003DMT400056413 Potato mitochondrion 52.35 59.77
CDY64080 Canola plasma membrane 49.09 59.73
CDX98408 Canola plasma membrane 49.15 59.71
AT3G60160.1 Thale cress plasma membrane 56.18 59.5
KRH66359 Soybean plasma membrane 56.24 58.94
Solyc10g024420.1.1 Tomato golgi, nucleus, plasma membrane 54.23 58.56
KXG31741 Sorghum plasma membrane 41.32 52.59
OQU92792 Sorghum plasma membrane 42.19 49.09
OQU93255 Sorghum plasma membrane 43.76 46.16
KXG40096 Sorghum plasma membrane 43.13 45.53
OQU86956 Sorghum plasma membrane 39.81 43.91
EES17847 Sorghum endoplasmic reticulum, plasma membrane, vacuole 33.98 41.31
KXG32483 Sorghum plasma membrane 35.55 37.5
KXG19351 Sorghum plasma membrane 34.8 37.4
OQU80926 Sorghum plasma membrane 34.67 37.31
KXG25638 Sorghum plasma membrane 33.79 36.77
KXG20196 Sorghum plasma membrane 34.29 36.54
EES10452 Sorghum plastid 34.42 35.44
EES12878 Sorghum plasma membrane 29.91 29.32
EER89345 Sorghum plasma membrane 26.39 28.74
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300UniProt:A0A1B6PMU2InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640EnsemblPlants:KXG27008ProteinID:KXG27008
ProteinID:KXG27008.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893
PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF165SMART:SM00382EnsemblPlantsGene:SORBI_3006G195800SUPFAM:SSF52540
SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI00081ADF6CSEG:seg::
Description
hypothetical protein
Coordinates
chr6:+:54881149..54889652
Molecular Weight (calculated)
178741.0 Da
IEP (calculated)
8.273
GRAVY (calculated)
0.039
Length
1595 amino acids
Sequence
(BLAST)
0001: MRRQKRNYQG CLRPCHAPPV SASPLYHRHQ FTTTTSLSLS PIPSLSLSLI GETMERVMSQ LHYSPAALAG ILPKRVQQLL IQGGFLDDPS DSTILHHVQE
0101: WQELYSPCFW MGTFALIQLI FIMSILAQFL FKKFRWWRQR LKAAAPESNK QHHEHKITDI KLGISYKACK ACCLLILGSH VLRAVFLQLH ERISECKYPP
0201: FILCESLQVL SWIILSILVF SFQKAKSAKL PMVIRSWWIF SFLQSATTVV IDLRSILATH DNLGFEEWID LFMLLVCTYL FAVSARGKTG ITFTDSSVTE
0301: PLLNPSVGQQ AEAKRPCPYG RANILELVTF SWMNPVFSIG YKKPLEKNEV PDVDGKDAAE FLSDSFKKII DDVERRHGLS TSSIYRAMFI LIRQKAMINA
0401: GFAVLSASAS YVGPSLINDL VKFLGGERQY GLKRGYILAV AFLSAKVVET IAQRQWIFGA RQLGMRLRAA LISHIYQKGL LLSCSSRQKH TSGEIINYMS
0501: VDIQRITDVI WYTNYIWMLP IQLSLAVYVL HTNLGVGAWA GLAATLAIMA CNIPLTRMQK RLQAKIMVAK DNRMKATTEV LRSMKILKVQ AWDMKYLQKL
0601: ETLRGEEYNW LWRSVRLSAL TTFIFWGSPA FISSITFGSC ILMGIPLTAG TVLSALATFR MLQDPIFTLP DLLSVFAQGK VSADRVVKYL EEEELKCDAV
0701: TQVPRNDTGY DVEIDHGIFS WELETTSPTL TDVELKVKRG MKVAICGMVG SGKSSLLSCI LGEMPKLDGT VRVSGRKAYV PQTAWILSGN IRENILFGNT
0801: HDKEKYEKII QACALTKDLE LFANGDLTEI GERGINMSGG QKQRIQIARS VYEDADIYLF DDPFSAVDAH TGSQLFKDCV MGILKDKTVL YVTHQVEFLP
0901: AADLILVMQD GKIVQKGKFD ELLQQNIGFE AIVGAHSQAL ESVINAESSS RILSDNQKSA DSEDEFDTEN ETDDQLQGIT KQESAHDVSQ DISDKGRLTQ
1001: EEEREKGGIG KKVYWAYLRA VHGGALVPVT IAAQSFFQIF QVASNYWMAW ASPPTTATTP TVGLGLLFSV YIALSMGSAL CVFSRSMLVS LIGLLTSEKF
1101: FKNMLHCILR APMSFFDSTP TGRILNRASN DQSVLDLEIA NKLGWCVFSI IQILGTIGVM SQVAWPVFAI FVPVTVVCFL CQRYYIPTAR ELARLSQIQR
1201: APILHHFAES LAGASSIRAY GQKDRFRKAN LGLVDNHSRP WFHNISAMEW LSFRLNMLSN FVFAFSLTLL VSLPEGFINP SIAGLAVTYA LNLNSQLASI
1301: IWNICNTENK MISVERIMQY SRIPSEAPLV VDHYRPPNSW PDAGTINIRS LEVRYAEHLP SVLRNISCTI PGRKKVGIVG RTGGGKSTFI QALFRIVEPR
1401: GGTIEIDNVD ILKIGLHDLR GRLSIIPQDP TMFEGTVRGN LDPLNEYPDH RVWEILDKCQ LGDIVRQNPK KLDSTVVENG ENWSVGQRQL FCLGRVLLKR
1501: SNVLVLDEAT ASVDSSTDAI IQKTIREEFG ECTVLTIAHR IHTVIDSDLI LVFSEGRIIE YDTPSKLLEN ENSEFSRLIK EYSRRSHGFG GTANN
Best Arabidopsis Sequence Match ( AT3G60160.3 )
(BLAST)
0001: MQVTFLAFFL IHLALKWFGV VRNRGSNDVE EDLKKQSITV KQSFSYNISL LCSVSILGTH CFILLLLFRD SVVSRCDSSV SVFSAEVSQS FSWLFVSVVV
0101: VKIRERRLVK FPWMLRSWWL CSFILSFSFD AHFITAKHEP LEFQDYADLT GLLASLFLLA VSIRGKTGFH LLESSGNTEP LLLGDQTEQN KKDSYSSSSP
0201: YGNATLFQRI TFSWINPLFS LGYKRPLEKD DVPDIDVKDS ARFCSHAFDQ KLKTTKEKEG PGNAFFYNSV LRYVWRKAAI NAVFAVVNAS TAYIGPYLIN
0301: DFVEFLSEKQ SQSLNHGYLL ALGFLTAKIV ETVTQRQWIF GARQLGLRLR AALISHIYQK GLVLSSQSRQ SHTSGEIINY MSVDVQRITD FIWYVNNIWM
0401: LPIQIFSAIY ILQKHLGLGA LAALVTTLMV MACNYPLTRL QRNYQSDIMN AKDDRMKATS EILKNMKILK LQAWDNQFLN KVKTLRKKEY DCLWKSLRLQ
0501: AFTTFILWGA PSLISVVTFV TCMLMGVKLT AGAVLSALAT FQMLQSPIFG LPDLLSALVQ SKVSADRIAS YLQQSETQKD AVEYCSKDHT ELSVEIENGA
0601: FSWEPESSRP TLDDIELKVK SGMKVAVCGA VGSGKSSLLS SILGEIQKLK GTVRVSGKQA YVPQSPWILS GTIRDNILFG SMYESEKYER TVKACALIKD
0701: FELFSNGDLT EIGERGINMS GGQKQRIQIA RAVYQNADIY LLDDPFSAVD AHTGRELFED CLMGILKDKT VLYVTHQVEF LPAADLILVM QNGRVMQAGK
0801: FEELLKQNIG FEVLVGAHNE ALDSILSIEK SSRNFKEGSK DDTASIAESL QTHCDSEHNI STENKKKEAK LVQDEETEKG VIGKEVYLAY LTTVKGGLLV
0901: PFIILAQSCF QMLQIASNYW MAWTAPPTAE SIPKLGMGRI LLVYALLAAG SSLCVLARTI LVAIGGLSTA ETFFSRMLCS IFRAPMSFFD STPTGRILNR
1001: ASTDQSVLDL EMAVKLGWCA FSIIQIVGTI FVMSQVAWQV CVIFIPVAVA CVFYQRYYTP TARELSRMSG VERAPILHHF AESLAGATTI RAFDQRDRFI
1101: SSNLVLIDSH SRPWFHVASA MEWLSFRLNL LSHFVFAFSL VLLVTLPEGV INPSIAGLGV TYGLSLNVLQ ATVIWNICNA ENKMISVERI LQYSKIPSEA
1201: PLVIDGHRPL DNWPNVGSIV FRDLQVRYAE HFPAVLKNIT CEFPGGKKIG VVGRTGSGKS TLIQALFRIV EPSQGTIVID NVDITKIGLH DLRSRLGIIP
1301: QDPALFDGTI RLNLDPLAQY TDHEIWEAID KCQLGDVIRA KDERLDATVV ENGENWSVGQ RQLVCLGRVL LKKSNILVLD EATASVDSAT DGVIQKIINQ
1401: EFKDRTVVTI AHRIHTVIES DLVLVLSDGR IAEFDSPAKL LQREDSFFSK LIKEYSLRSN HFAGSNDLLS
Arabidopsis Description
ABCC9ABC transporter C family member 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.