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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 6
  • endoplasmic reticulum 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004361_P001 Maize plasma membrane 92.25 93.03
Os04t0209200-01 Rice plasma membrane 73.6 89.2
TraesCS2A01G056800.1 Wheat plasma membrane 56.68 88.51
TraesCS2B01G069000.2 Wheat plastid 81.34 82.3
HORVU2Hr1G009580.3 Barley plastid 62.23 65.27
GSMUA_Achr2P02280_001 Banana cytosol, golgi, plasma membrane 46.03 61.79
KXG32483 Sorghum plasma membrane 59.46 60.91
VIT_07s0005g00260.t01 Wine grape plasma membrane 48.55 58.98
CDY23680 Canola plasma membrane 49.45 57.12
CDX76656 Canola plasma membrane, plastid 52.94 55.44
CDY11440 Canola plastid 52.61 54.88
Solyc09g075020.2.1 Tomato plastid 53.58 54.86
KRH31883 Soybean plastid 52.68 54.36
Bra032248.1-P Field mustard plasma membrane, plastid 50.55 54.34
PGSC0003DMT400029581 Potato plasma membrane 53.52 54.25
CDY43277 Canola plastid 52.36 54.14
Bra018722.1-P Field mustard plasma membrane, plastid 52.61 53.69
CDX93660 Canola plastid 52.55 53.62
AT2G47800.1 Thale cress plasma membrane 52.29 53.43
KRG96433 Soybean endoplasmic reticulum 51.84 53.39
Bra007695.1-P Field mustard plastid 52.94 53.35
KRH12057 Soybean endoplasmic reticulum 51.26 52.9
PGSC0003DMT400016069 Potato endoplasmic reticulum, plasma membrane 46.68 52.7
KRH37107 Soybean endoplasmic reticulum 51.13 52.59
AT3G62700.1 Thale cress plasma membrane 51.97 52.31
Solyc01g080640.2.1 Tomato plastid 49.26 50.93
KXG31741 Sorghum plasma membrane 35.51 43.89
OQU92792 Sorghum plasma membrane 36.73 41.5
OQU93255 Sorghum plasma membrane 38.41 39.35
EES17847 Sorghum endoplasmic reticulum, plasma membrane, vacuole 33.05 39.02
KXG40096 Sorghum plasma membrane 37.06 37.99
KXG26126 Sorghum plasma membrane 34.67 36.09
KXG25638 Sorghum plasma membrane 33.7 35.61
OQU86956 Sorghum plasma membrane 33.12 35.48
OQU80926 Sorghum plasma membrane 33.89 35.43
KXG20196 Sorghum plasma membrane 34.09 35.27
KXG19351 Sorghum plasma membrane 33.51 34.97
KXG27008 Sorghum plasma membrane 35.44 34.42
EES12878 Sorghum plasma membrane 30.34 28.89
EER89345 Sorghum plasma membrane 26.47 27.99
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300EntrezGene:8083426InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSUniProt:C5YCN5ncoils:CoilEnsemblPlants:EES10452
ProteinID:EES10452ProteinID:EES10452.1GO:GO:0000166GO:GO:0000325GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005773GO:GO:0005774GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF215SMART:SM00382EnsemblPlantsGene:SORBI_3006G022200
SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0001A86A7DRefSeq:XP_002446124.1SEG:seg
Description
hypothetical protein
Coordinates
chr6:+:3913531..3923044
Molecular Weight (calculated)
169010.0 Da
IEP (calculated)
5.680
GRAVY (calculated)
0.214
Length
1549 amino acids
Sequence
(BLAST)
0001: MEAPSPSALP WWLATTACSA PPPTPAVSSS ILGRLAFLFL SPCPQRALLA ALDLLFLVAA LAVTLRARRL SRRGNDDDGS DLGLDHRARE PLLAKPVTTD
0101: QTPAPAPPPL RFRHGLALAA SAVQAAAALV LLLLLALLRR SGRTTAGLVV AECAFLAAHA VAHLAAAAWL VAAEKNTAAG APPPARHHPL YLRLFWLATP
0201: AFAAVFAGCA AARYAAAEPL VPDDPLAFAW LALSLPLLYF SAAGSTGLVV DSDSDGDGRA AAVAEETYAT ASWLSLATFG WINPLIAKGS RATLAADQVP
0301: PVAPPDTAEA AYALLASNWP APAPGSSKPV RPVLTALLRS FWPQFLLTAV LGVAHLSVMY IGPSLVDRFV GFVRRGGELT EGLQLVAVLL VGKAAETMAS
0401: HHYEFQGQKL GMRINAALLA AVYRKSLRLS TGARRAHGAG AIVNYMEVDA QEVADVTHQL HNLWLMPLEI AVALALLYTH LGPAVLTAVA AIAVVTVVVA
0501: FANKLNIEYQ FKFLGKRDER MKAITELLNY IRVIKLQAWE ETFGNKIREL REEELGWLAK SMYFMCANTV VLWSGPLAMT VLVFGTCVLT GVQLDAGKVF
0601: TATAFFRMLD APMQSFPEAI AAVTQATVSV GRLDRYLLDA ELDDSAVEHV DDAGIDTSAV VVEVRDGVFA WDVRGKKQSE EGEDGESEEE KDVEGTPVLE
0701: TVLKGINVEV RKGELAAVVG MVGSGKSSLL SCIMGEMEKI SGRVRVCGST AYVAQTAWIQ NGTIQENILF GQPMHAERYK EVIRSCCLEK DLELMEFGDQ
0801: TEIGERGINL SGGQKQRIQL ARAVYQHCDI YLLDDVFSAV DAHTGSNIFK ECLRGTLKGK TIILVTHQVD FLHNVDNIFV MRDGMIAQSG KYDELLEAGS
0901: DFAALVAAHD SSMELVEQRC QVEKPEHFQP TAVVRIPSLR SRSIGKGEKV VVAPEIEAAT SKIIQEEERE SGQVSWRVYK LYMTEAWGWW GVVGMLTFAV
1001: VWQGSEMASD YWLSYETSGS IPFNPSLFIG VYAAIATFSM VLQVIKTLLE TVLGLQTAQI FFKKMFDSIL HAPMSFFDTT PSGRILSRAS SDQTTIDVVL
1101: AFFVGLTISM YISVLSTIIV TCQVAWPSVV AVIPLLLLNI WYRNRYLATA RELTRLEGVT KAPVIDHFSE TVLGATTIRC FKKEKEFFQE NLDKINSSLR
1201: MYFHNYAANE WLGFRLELIG TLVLSITAFL MISLPSNFIK KEFVGMSLSY GLSLNSLVYF AISISCMLEN DMVAVERVNQ FSALPSEAAW KIEKPIPSSN
1301: WPTHGDIDIK DLKVRYRPNT PLILKGINIS INGGEKIGVI GRTGSGKSTL IQALFRLVEP AEGKMIIDGI DICTLGLHDL RSRFGIIPQE PVLFEGTIRS
1401: NIDPIGEYSD AEIWQALERC QLKDVVVSKP EKLDAPVADS GENWSVGQRQ LLCLGRVILK QTQILFMDEA TASVDSQTDA IIQKITRQEF SSCTIISIAH
1501: RIPTVMDCDR VLVLDAGLVK EFDSPSRLIE QPSLFGAMVQ EYANRSSSL
Best Arabidopsis Sequence Match ( AT3G62700.1 )
(BLAST)
0001: MRWLSSTWLS DLSCSSSSVI EPSSSLPAPI QWLRFILLSP CPQRLLSSTV DVLFLLILFF FAIQKLCSSS SSRTNGEADI TKPLLGRRTR TRTTGLFKTT
0101: VVVTIVLSFC SLVLCVSAFF TTRTKLKLVD TLFWLIHAVT NVVIAVLVLH LKRFASPSHP LTLRIYWVFN FVVTTLFTVS GILHLLSDDP AAASLRADDV
0201: ASFISFPLTA VLLLVSIKGS TGVVVTTSNV TAPAKSNDVV VEKSENVSLY ASASFISKTF WLWMNPLLRK GYKSPLNLDQ VPTLSPEHRA EKLATLFESK
0301: WPKPQENSRN PVRTTLIRCF WKEIAFTAVL AIIRLSVIYV GPVLIQSFVD FTSGKRSSPS QGYYLVLILL IAKFVEVLST HQFNFNSQKL GMLIRSTLIT
0401: ALYKKGLKLT GSARQNHGVG QIVNYMAVDA QQLSDMMLQL HAIWLMPLQV AAAIVLLYNT LGPSVVTTVI GLTGIFVFIL LGTKRNNRYQ FSLMMNRDSR
0501: MKATNEMLNY MRVIKFQAWE DHFNERILKF REMEFGWLSK FLYSIAGNII VLWSTPVLIS ALTFTTAVFL GVKLDAGTVF TTTTIFKILQ EPIRTFPQSM
0601: ISLSQAMISL GRLDAYMMSR ELSEETVERS QGCDGNVAVE IKDGSFSWDD EDDEPAIENI NFEVKKGELA AIVGTVGSGK SSLLASVLGE MHKLSGKVRV
0701: CGTTAYVAQT SWIQNGTVQD NILFGLPMNR SKYNEVLKVC CLEKDMQIME FGDQTEIGER GINLSGGQKQ RIQLARAVYQ ESDVYLLDDV FSAVDAHTGS
0801: DIFKKCVRGA LKGKTILLVT HQVDFLHNVD RILVMRDGMI VQSGKYDELV SSGLDFGELV AAHETSMELV EAGSASATAA NVPMASPITQ RSISIESPRQ
0901: PKSPKVHRTT SMESPRVLRT TSMESPRLSE LNDESIKSFL GSNIPEDGSR LIKEEEREVG QVSFQVYKLY STEAYGWWGM ILVVFFSVAW QASLMASDYW
1001: LAYETSAKNE VSFDATVFIR VYVIIAAVSI VLVCLRAFYV THLGLKTAQI FFKQILNSLV HAPMSFFDTT PSGRILSRAS TDQTNVDIFI PFMIGLVATM
1101: YTTLLSIFIV TCQYAWPTVF FIIPLGWLNI WYRGYYLASS RELTRLDSIT KAPVIHHFSE SIAGVMTIRA FKKQPMFRQE NVKRVNANLR MDFHNNGSNE
1201: WLGFRLELIG SWVLCISALF MVMLPSNIIK PENVGLSLSY GLSLNGVLFW AIYLSCFIEN KMVSVERIKQ FTDIPAEAKW EIKESRPPPN WPYKGNIRLE
1301: DVKVRYRPNT PLVLKGLTID IKGGEKIGVV GRTGSGKSTL IQVLFRLVEP SGGKIIIDGI DICTLGLHDL RSRFGIIPQE PVLFEGTVRS NIDPTEKYSD
1401: EEIWKSLERC QLKDVVASKP EKLDSLVADN GENWSVGQRQ LLCLGRVMLK RSRILFLDEA TASVDSQTDA MIQKIIREDF SDCTIISIAH RIPTVMDCDR
1501: VLVIDAGKAK EYDSPVRLLE RQSLFAALVQ EYALRSAGI
Arabidopsis Description
ABCC14ABC transporter C family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZJ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.