Factsheet for AT2G47800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23680	Canola	plasma membrane	80.01	90.45
CDY43277	Canola	plastid	88.26	89.32
CDX93660	Canola	plastid	89.38	89.26
Bra018722.1-P	Field mustard	plasma membrane, plastid	89.38	89.26
Bra032248.1-P	Field mustard	plasma membrane, plastid	83.18	87.51
AT3G62700.1	Thale cress	plasma membrane	82.92	81.68
VIT_07s0005g00260.t01	Wine grape	plasma membrane	63.92	76.0
KRH31883	Soybean	plastid	69.53	70.22
KRG96433	Soybean	endoplasmic reticulum	67.48	68.02
GSMUA_Achr2P02280_001	Banana	cytosol, golgi, plasma membrane	51.12	67.16
Solyc09g075020.2.1	Tomato	plastid	66.75	66.89
PGSC0003DMT400029581	Potato	plasma membrane	66.95	66.43
TraesCS2A01G056800.1	Wheat	plasma membrane	40.3	61.59
TraesCS5A01G467600.1	Wheat	plasma membrane	60.75	61.2
TraesCS5B01G479900.1	Wheat	golgi	60.75	61.11
KXG32483	Sorghum	plasma membrane	60.95	61.11
TraesCS5D01G480600.1	Wheat	plasma membrane	60.62	61.02
Zm00001d009243_P001	Maize	mitochondrion	60.49	60.77
Os01t0356400-01	Rice	plasma membrane	59.43	59.0
Os04t0209200-01	Rice	plasma membrane	49.74	59.0
HORVU2Hr1G009680.2	Barley	plastid	39.84	54.51
TraesCS2B01G069000.2	Wheat	plastid	53.3	52.78
Zm00001d004361_P001	Maize	plasma membrane	53.1	52.41
EES10452	Sorghum	plastid	53.43	52.29
Os04t0209300-01	Rice	plasma membrane	51.12	51.26
TraesCSU01G014100.1	Wheat	plasma membrane	50.26	50.66
TraesCS2A01G056900.1	Wheat	plasma membrane, plastid	49.54	50.5
TraesCS2A01G057100.1	Wheat	plasma membrane	49.74	50.2
Zm00001d025043_P004	Maize	plasma membrane, plastid	49.93	49.67
AT3G60970.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	31.6	45.49
HORVU2Hr1G009580.3	Barley	plastid	43.73	44.89
AT3G13080.1	Thale cress	plasma membrane, plastid	39.25	39.3
AT1G04120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	38.92	38.97
AT3G13100.1	Thale cress	plasma membrane	37.86	38.45
AT3G60160.1	Thale cress	plasma membrane	37.86	38.11
AT3G59140.1	Thale cress	plasma membrane	36.08	37.65
AT3G21250.4	Thale cress	plasma membrane	36.08	37.21
AT1G30420.1	Thale cress	plasma membrane	30.54	30.97
AT1G30410.1	Thale cress	plasma membrane	30.28	30.64
AT2G34660.1	Thale cress	plasma membrane	31.4	29.33
AT2G07680.3	Thale cress	plasma membrane	27.04	28.75

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	EntrezGene:819392	InterPro:AAA+_ATPase	ProteinID:AAC63634.1
InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AEC10889.1	EMBL:AF243509
EMBL:AK226656	ArrayExpress:AT2G47800	EnsemblPlantsGene:AT2G47800	RefSeq:AT2G47800	TAIR:AT2G47800	RefSeq:AT2G47800-TAIR-G
EnsemblPlants:AT2G47800.1	TAIR:AT2G47800.1	Symbol:ATMRP4	Unigene:At.37	ProteinID:CAA05625.1	GO:GO:0000166
GO:GO:0000325	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005794	GO:GO:0005886	GO:GO:0006810	GO:GO:0006855	GO:GO:0006950	GO:GO:0008150
GO:GO:0008559	GO:GO:0009414	GO:GO:0009506	GO:GO:0009605	GO:GO:0009607	GO:GO:0009611
GO:GO:0009624	GO:GO:0009628	GO:GO:0009987	GO:GO:0010118	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0042908	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	RefSeq:NP_182301.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0005052
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007131	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020127	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24223	PANTHER:PTHR24223:SF215	UniProt:Q7DM58	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	EMBL:U96399	UniParc:UPI00000AB1A7	SEG:seg

Description

ABCC4ABC transporter C family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DM58]

Coordinates

chr2:+:19574666..19580615

Molecular Weight (calculated)

169089.0 Da

IEP (calculated)

7.702

GRAVY (calculated)

0.178

Length

1516 amino acids

Sequence
(BLAST)

0001: MWLLSSSPWL SELSCSYSAV VEHTSSVPVP IQWLRFVLLS PCPQRALFSA VDFIFLLCFA LHKLFSSPSS SSEINGHAEI RKPLIGIRGR TPTRTTAWFK
0101: TTVAVTVLLS FCSVVLCVLA FTGKRRTQRP WNLIDPLFWL IHAVTHLVIA VLVLHQKRFA ALNHPLSLRI YWISSFVLTS LFAVTGIFHF LSDAATSLRA
0201: EDVASFFSFP LTAFLLIASV RGITGLVTAE TNSPTKPSDA VSVEKSDNVS LYASASVFSK TFWLWMNPLL SKGYKSPLTL EQVPTLSPEH KAERLALLFE
0301: SSWPKPSENS SHPIRTTLLR CFWKEILFTA ILAIVRLGVM YVGPVLIQSF VDFTSGKRSS PWQGYYLVLI LLVAKFVEVL TTHQFNFDSQ KLGMLIRSTL
0401: ITALYKKGLK LTGSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTVALVLLY GSLGASVITA VIGLTGVFVF ILLGTQRNNG YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL KFRDMEFGWL SKFLYSIAGN IIVLWSTPVL ISALTFATAL ALGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSEDAVE RALGCDGNTA VEVRDGSFSW DDEDNEPALS DINFKVKKGE LTAIVGTVGS GKSSLLASVL GEMHRISGQV
0701: RVCGSTGYVA QTSWIENGTV QDNILFGLPM VREKYNKVLN VCSLEKDLQM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQECDVYLLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMRDG KIVESGKYDE LVSSGLDFGE LVAAHETSME LVEAGADSAA VATSPRTPTS PHASSPRTSM
0901: ESPHLSDLND EHIKSFLGSH IVEDGSKLIK EEERETGQVS LGVYKQYCTE AYGWWGIVLV LFFSLTWQGS LMASDYWLAY ETSAKNAISF DASVFILGYV
1001: IIALVSIVLV SIRSYYVTHL GLKTAQIFFR QILNSILHAP MSFFDTTPSG RILSRASTDQ TNVDILIPFM LGLVVSMYTT LLSIFIVTCQ YAWPTAFFVI
1101: PLGWLNIWYR NYYLASSREL TRMDSITKAP IIHHFSESIA GVMTIRSFRK QELFRQENVK RVNDNLRMDF HNNGSNEWLG FRLELVGSWV LCISALFMVL
1201: LPSNVIRPEN VGLSLSYGLS LNSVLFFAIY MSCFVENKMV SVERIKQFTD IPSESEWERK ETLPPSNWPF HGNVHLEDLK VRYRPNTPLV LKGITLDIKG
1301: GEKVGVVGRT GSGKSTLIQV LFRLVEPSGG KIIIDGIDIS TLGLHDLRSR FGIIPQEPVL FEGTVRSNID PTEQYSDEEI WKSLERCQLK DVVATKPEKL
1401: DSLVVDNGEN WSVGQRQLLC LGRVMLKRSR LLFLDEATAS VDSQTDAVIQ KIIREDFASC TIISIAHRIP TVMDGDRVLV IDAGKAKEFD SPARLLERPS
1501: LFAALVQEYA LRSAGI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.