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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • mitochondrion 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:endoplasmic reticulum, plasma membrane
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G480600.1 Wheat plasma membrane 98.21 98.27
TraesCS5A01G467600.1 Wheat plasma membrane 97.94 98.07
KXG32483 Sorghum plasma membrane 83.54 83.27
Zm00001d009243_P001 Maize mitochondrion 83.34 83.23
Os01t0356400-01 Rice plasma membrane 76.78 75.77
GSMUA_Achr2P02280_001 Banana cytosol, golgi, plasma membrane 54.68 71.4
VIT_07s0005g00260.t01 Wine grape plasma membrane 58.0 68.55
CDY23680 Canola plasma membrane 57.27 64.36
CDX76656 Canola plasma membrane, plastid 60.65 61.8
KRH31883 Soybean plastid 61.38 61.63
CDY11440 Canola plastid 60.58 61.48
Solyc09g075020.2.1 Tomato plastid 61.65 61.4
CDY43277 Canola plastid 60.98 61.35
Bra032248.1-P Field mustard plasma membrane, plastid 58.59 61.28
Bra018722.1-P Field mustard plasma membrane, plastid 61.51 61.07
PGSC0003DMT400029581 Potato plasma membrane 61.84 60.99
CDX93660 Canola plastid 61.38 60.94
AT2G47800.1 Thale cress plasma membrane 61.11 60.75
KRG96433 Soybean endoplasmic reticulum 60.19 60.31
PGSC0003DMT400016069 Potato endoplasmic reticulum, plasma membrane 54.81 60.2
AT3G62700.1 Thale cress plasma membrane 60.92 59.65
Bra007695.1-P Field mustard plastid 60.78 59.6
TraesCS2B01G069000.2 Wheat plastid 59.59 58.65
Solyc01g080640.2.1 Tomato plastid 57.6 57.94
KRH12057 Soybean endoplasmic reticulum 57.27 57.49
KRH37107 Soybean endoplasmic reticulum 57.33 57.37
TraesCS1B01G321200.1 Wheat peroxisome 34.84 40.89
TraesCS4B01G343800.2 Wheat plasma membrane 39.81 39.87
TraesCS4B01G253200.1 Wheat plasma membrane 39.08 39.74
TraesCS2B01G529000.2 Wheat plasma membrane 34.11 39.72
TraesCS2B01G442400.1 Wheat plasma membrane 33.11 39.54
TraesCS3B01G395000.2 Wheat plasma membrane 37.89 38.9
TraesCS3B01G148100.2 Wheat plasma membrane, plastid 38.62 38.8
TraesCS7B01G016500.1 Wheat plasma membrane 35.9 36.53
TraesCS2B01G473000.1 Wheat endoplasmic reticulum 36.3 36.49
TraesCS7B01G269700.1 Wheat cytosol, golgi, plasma membrane 35.43 36.25
TraesCS2B01G150600.1 Wheat plasma membrane 35.77 35.91
TraesCS3B01G425500.1 Wheat cytosol, peroxisome, plasma membrane 34.77 35.82
TraesCS2B01G472800.1 Wheat cytosol, peroxisome, plasma membrane 37.56 34.08
TraesCS7B01G052900.1 Wheat plasma membrane 27.94 28.89
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664
ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF215SMART:SM00382
SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixEnsemblPlantsGene:TraesCS5B01G479900EnsemblPlants:TraesCS5B01G479900.1TIGR:cd03244
TIGR:cd03250SEG:seg::::
Description
No Description!
Coordinates
chr5B:+:652469419..652479202
Molecular Weight (calculated)
165786.0 Da
IEP (calculated)
7.091
GRAVY (calculated)
0.187
Length
1507 amino acids
Sequence
(BLAST)
0001: MELASTAPWW LTTRTCGLPS AAATGVLDWA AFLFLSTCSQ RLMLSAADAA FLVAVLCLAV GKVLSRRRDG AVNGNGADKP LLDRGWTRAV RVGAGFVLAL
0101: AASAVLAGFY AVLFVLSVVM RGGEGEVQEA VFLALQCAAH LAAAALVGHE KRFRAAAHPL TLRLFWLAAS ALTALLAGAA VARLASGAGA LPDDALAIAA
0201: LVLSLPLPVV AVLGATGISE KEQADDDRSE EEEEAASKEK NTTPYASASW PSRMSWAWMN PLIQRGYRSP LDLSDVPTLA PAHRPERMHA LFLSHWPSSW
0301: ARKDNNPVRH ALLRCFWPLF LLNAGLALLR LTVMYVGPTL IQSFVSFTSA AERRPLWEGA RLVLALLAAK AMEALCSHQY NFHCQKLGMQ IRGALITALY
0401: RKGLRLSCSA RQKHGLGMIV NYMAVDAQQL SDMMLQIHYL WLMPLQVGVA LGLLYIYLGP PVTSALVGVF GVMAFVLLGT RRNNRYQFSL SGERDKRMKA
0501: TNEMLSYMRV IKFQAWEEHF NARIGRFRRL EFGWLTRFMY SISGNIVVLW SAPTVVSALV FGTCVAVGVP LDAGLVFTAT SLFKILQEPM RNFPQAMIQA
0601: SQAMISLQRL DSYMTSPELD EGAVEREPAA ASRDGGVAVH ARDGVFTWDD EETEAGKEVL RGIDLEIRSG KLAAVVGMVG SGKSSLLGCI LGEMRKVSGK
0701: VKVCGTTAYV AQTAWIQNGT IEENILFGQP MHGERYKEVI RVCCLEKDME MMEFGDQTEI GERGINLSGG QKQRIQLARA VYQDCDIYLL DDVFSAVDAH
0801: TGSEIFKECV RGALKNKTVV LVTHQVDFLH NADIIYVMKE GTIVQSGKYD ELIQRGSDFA ALVAAHNSSM ELVEGAAPVS DEKGETPAIS RQPSRKGSGR
0901: RPSSGEAHGV VAEKASARLI KEEERASGHV SLAVYKQYMT EAWGWWGVAL VVAVSVAWQG SVLASDYWLA YETDAENAAS FRPALFIEVY AIIAVASVVL
1001: VSGRSFLVAF IGLQTANSFF KQILNSILHA PMSFFDTTPS GRILSRASSD QTNVDLFLPF FVWLSVSMYI TVISVLVVTC QVAWPSVIAI IPLLILNLWY
1101: RGYYLATSRE LTRLESITKA PVIHHFSETV QGVMTIRCFR KGDGFFQENL NRVNSSLRMD FHNNGANEWL GFRLELAGSF VLCFTALLMV TLPKSFIQPE
1201: FVGLSLSYGL SLNSVLFWAV WMSCFIENKM VSVERIKQFV NIPCEAEWRI KDCLPVANWP TRGDIEVIDL KVRYRHNTPL VLKGITLSIH GGEKIGVVGR
1301: TGSGKSTLIQ ALFRIVEPSE GKIIIDGVDI CTLGLHDLRS RFGIIPQEPV LFEGTIRSNI DPLEEYSDVE IWQALDRCQL KEAVTSKPEK LDASVVDNGE
1401: NWSVGQRQLL CLGRVMLKHS KILFMDEATA SVDSQTDAVI QRIIREDFAE CTIISIAHRI PTVMDCDRVL VVDAGLAKEF DRPAALIERP SLFGALVQEY
1501: ANRSSDM
Best Arabidopsis Sequence Match ( AT3G62700.1 )
(BLAST)
0001: MRWLSSTWLS DLSCSSSSVI EPSSSLPAPI QWLRFILLSP CPQRLLSSTV DVLFLLILFF FAIQKLCSSS SSRTNGEADI TKPLLGRRTR TRTTGLFKTT
0101: VVVTIVLSFC SLVLCVSAFF TTRTKLKLVD TLFWLIHAVT NVVIAVLVLH LKRFASPSHP LTLRIYWVFN FVVTTLFTVS GILHLLSDDP AAASLRADDV
0201: ASFISFPLTA VLLLVSIKGS TGVVVTTSNV TAPAKSNDVV VEKSENVSLY ASASFISKTF WLWMNPLLRK GYKSPLNLDQ VPTLSPEHRA EKLATLFESK
0301: WPKPQENSRN PVRTTLIRCF WKEIAFTAVL AIIRLSVIYV GPVLIQSFVD FTSGKRSSPS QGYYLVLILL IAKFVEVLST HQFNFNSQKL GMLIRSTLIT
0401: ALYKKGLKLT GSARQNHGVG QIVNYMAVDA QQLSDMMLQL HAIWLMPLQV AAAIVLLYNT LGPSVVTTVI GLTGIFVFIL LGTKRNNRYQ FSLMMNRDSR
0501: MKATNEMLNY MRVIKFQAWE DHFNERILKF REMEFGWLSK FLYSIAGNII VLWSTPVLIS ALTFTTAVFL GVKLDAGTVF TTTTIFKILQ EPIRTFPQSM
0601: ISLSQAMISL GRLDAYMMSR ELSEETVERS QGCDGNVAVE IKDGSFSWDD EDDEPAIENI NFEVKKGELA AIVGTVGSGK SSLLASVLGE MHKLSGKVRV
0701: CGTTAYVAQT SWIQNGTVQD NILFGLPMNR SKYNEVLKVC CLEKDMQIME FGDQTEIGER GINLSGGQKQ RIQLARAVYQ ESDVYLLDDV FSAVDAHTGS
0801: DIFKKCVRGA LKGKTILLVT HQVDFLHNVD RILVMRDGMI VQSGKYDELV SSGLDFGELV AAHETSMELV EAGSASATAA NVPMASPITQ RSISIESPRQ
0901: PKSPKVHRTT SMESPRVLRT TSMESPRLSE LNDESIKSFL GSNIPEDGSR LIKEEEREVG QVSFQVYKLY STEAYGWWGM ILVVFFSVAW QASLMASDYW
1001: LAYETSAKNE VSFDATVFIR VYVIIAAVSI VLVCLRAFYV THLGLKTAQI FFKQILNSLV HAPMSFFDTT PSGRILSRAS TDQTNVDIFI PFMIGLVATM
1101: YTTLLSIFIV TCQYAWPTVF FIIPLGWLNI WYRGYYLASS RELTRLDSIT KAPVIHHFSE SIAGVMTIRA FKKQPMFRQE NVKRVNANLR MDFHNNGSNE
1201: WLGFRLELIG SWVLCISALF MVMLPSNIIK PENVGLSLSY GLSLNGVLFW AIYLSCFIEN KMVSVERIKQ FTDIPAEAKW EIKESRPPPN WPYKGNIRLE
1301: DVKVRYRPNT PLVLKGLTID IKGGEKIGVV GRTGSGKSTL IQVLFRLVEP SGGKIIIDGI DICTLGLHDL RSRFGIIPQE PVLFEGTVRS NIDPTEKYSD
1401: EEIWKSLERC QLKDVVASKP EKLDSLVADN GENWSVGQRQ LLCLGRVMLK RSRILFLDEA TASVDSQTDA MIQKIIREDF SDCTIISIAH RIPTVMDCDR
1501: VLVIDAGKAK EYDSPVRLLE RQSLFAALVQ EYALRSAGI
Arabidopsis Description
ABCC14ABC transporter C family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZJ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.