Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 3
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
26371478
|
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029581 | Potato | plasma membrane | 96.83 | 95.88 |
| VIT_07s0005g00260.t01 | Wine grape | plasma membrane | 65.7 | 77.96 |
| KRH31883 | Soybean | plastid | 70.39 | 70.95 |
| CDY23680 | Canola | plasma membrane | 62.26 | 70.25 |
| KRG96433 | Soybean | endoplasmic reticulum | 68.21 | 68.62 |
| GSMUA_Achr2P02280_001 | Banana | cytosol, golgi, plasma membrane | 51.88 | 68.02 |
| CDX76656 | Canola | plasma membrane, plastid | 66.36 | 67.88 |
| CDY11440 | Canola | plastid | 66.09 | 67.34 |
| Bra032248.1-P | Field mustard | plasma membrane, plastid | 63.91 | 67.11 |
| CDY43277 | Canola | plastid | 66.42 | 67.09 |
| CDX93660 | Canola | plastid | 67.15 | 66.93 |
| Bra018722.1-P | Field mustard | plasma membrane, plastid | 67.09 | 66.86 |
| AT2G47800.1 | Thale cress | plasma membrane | 66.89 | 66.75 |
| AT3G62700.1 | Thale cress | plasma membrane | 66.89 | 65.76 |
| Bra007695.1-P | Field mustard | plastid | 66.42 | 65.39 |
| TraesCS2A01G056800.1 | Wheat | plasma membrane | 41.11 | 62.7 |
| TraesCS5A01G467600.1 | Wheat | plasma membrane | 61.4 | 61.73 |
| TraesCS5B01G479900.1 | Wheat | golgi | 61.4 | 61.65 |
| KXG32483 | Sorghum | plasma membrane | 61.6 | 61.64 |
| TraesCS5D01G480600.1 | Wheat | plasma membrane | 61.2 | 61.49 |
| Solyc01g080640.2.1 | Tomato | plastid | 60.61 | 61.22 |
| Zm00001d009243_P001 | Maize | mitochondrion | 60.67 | 60.84 |
| Os04t0209200-01 | Rice | plasma membrane | 50.1 | 59.31 |
| Os01t0356400-01 | Rice | plasma membrane | 58.63 | 58.09 |
| HORVU2Hr1G009680.2 | Barley | plastid | 40.98 | 55.96 |
| Solyc05g014390.2.1 | Tomato | cytosol | 10.24 | 55.16 |
| TraesCS2B01G069000.2 | Wheat | plastid | 54.53 | 53.89 |
| EES10452 | Sorghum | plastid | 54.86 | 53.58 |
| Zm00001d004361_P001 | Maize | plasma membrane | 54.0 | 53.19 |
| TraesCS2A01G056900.1 | Wheat | plasma membrane, plastid | 50.5 | 51.38 |
| Os04t0209300-01 | Rice | plasma membrane | 51.09 | 51.12 |
| TraesCSU01G014100.1 | Wheat | plasma membrane | 50.63 | 50.93 |
| TraesCS2A01G057100.1 | Wheat | plasma membrane | 50.23 | 50.6 |
| Zm00001d025043_P004 | Maize | plasma membrane, plastid | 50.89 | 50.52 |
| HORVU2Hr1G009580.3 | Barley | plastid | 44.48 | 45.57 |
| Solyc09g064440.2.1 | Tomato | plastid | 40.38 | 39.91 |
| Solyc03g007530.2.1 | Tomato | plasma membrane | 36.29 | 37.42 |
| Solyc08g081890.2.1 | Tomato | endoplasmic reticulum, nucleus, plasma membrane | 36.29 | 37.12 |
| Solyc06g036490.1.1 | Tomato | plastid | 29.02 | 36.8 |
| Solyc10g024420.1.1 | Tomato | golgi, nucleus, plasma membrane | 35.89 | 36.76 |
| Solyc12g044820.1.1 | Tomato | plasma membrane | 34.7 | 36.01 |
| Solyc05g014380.2.1 | Tomato | plasma membrane | 24.45 | 32.6 |
| Solyc08g006880.2.1 | Tomato | nucleus | 32.12 | 29.89 |
| Solyc03g117540.2.1 | Tomato | extracellular | 28.16 | 28.76 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0000325 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | UniProt:K4CV79 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF215 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | EnsemblPlantsGene:Solyc09g075020.2 | EnsemblPlants:Solyc09g075020.2.1 | TMHMM:TMhelix | UniParc:UPI000276B77A |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:66821028..66829760
Molecular Weight (calculated)
170161.0 Da
IEP (calculated)
7.145
GRAVY (calculated)
0.132
Length
1513 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNLVWFTMDI GKNMAWLTSL SCSASTLESD SGVVEWLRFI FLSPCPQRTM LSSIDLLLLL IFMVFAVQKL YSKWRSNDHS NDSGIDKPLI AHSRVSVRIN
0101: LWFKLSLILS AILAVCSIVL CILVLGVSNR SPWKVIDGVY WLCQAITHVV ITILIAHEKR FRAVSHPMSL RVFWIVNFVV MSLFFGCGVT RLVSFKEIDP
0201: NLRMDDISSF FAFPISVVLF IVAIKGSTGV AVISDSETHI EDETNGYDES LVEKSSVTGF ASASLLSKTF WLWMNPLLQK GYKSPLKIDE VPSLSPHHKA
0301: DKMSQLFERN WPKPEENSKH PVRTTLLRCF WKEVAFTATL AVIRVCVMYV GPTLINRFVD YTAGKRTSPY EGYYLIGTLL IAKFVEVLTS HQFNFNSQKL
0401: GMLIRSTLVT SLYRKGLRLS CSARQAHGVG QIVNYMAVDA QQLSDMMLQL HSIWLMPLQV SVALAILYTS LGASTVVTLA GLAAVMAFVV FGTKRNNRFQ
0501: SNIMKNRDSR MKATNEMLNY MRVIKFQAWE EHFNKRIQSF RESEYTWLSN FLYSIAGNIV VLWSAPLLVA TLTFGSAILL GIPLDAGTVF TATALFKMLQ
0601: EPIRAFPRSM ISLSQAMISL ERLDKYMISK ELVDKSVERL EGCGSTVAMK VKDGTFGWDD DNSEETLKDI NFEIRKGDLA AVVGTVGSGK SSLLASVLGE
0701: MHKLSGQVTV CGSTAYVAQT SWIQNGTIEE NILFGMRMNK DRYKEVIRVC CLEKDLEMME FGDQTEIGER GINLSGGQKQ RIQLARAVYQ DCDIYLLDDV
0801: FSAVDAHTGS EIFKECVRGI LKDKTILLVT HQVDFLHNID LILVMRDGMI VQSGKYNELL EAGMDFKALV AAHETSLELV DVETNNESTA SLEVSKSSRR
0901: LSRQGEENGE DNSQQSTSDR GNSKLIKEEE RETGKVSLVV YKQYVTEAFG WWGVVLVLLF SFLWQGSLMA SDYWLAYETS ADRAMSFNPS LFIEIYGIIA
1001: LVSSVLIVAR MYFVTLMGLK TAQIFFGKIL HSILHAPMSF FDTTPSGRIL SRASNDQTNI DVFLPFFMNL TLAMFVTLLG IIIITCQYSW PTTLLLIPLG
1101: WLNVWYRGYY LATSRELTRL DSITKAPVIH HFSESISGVM TIRCFRKQEM FSQENVNRVD ANLRMDFHNN GSNEWLGFRL ELLGSLLLCV SAMFMIILPS
1201: SIIKPENVGL SLSYGLSLNS VLFWSVFVSC FVENKMVSVE RLKQFSCIPS EAEWRKRDFV PPSDWPNHGN VELEDLQVRY RPNTPLVLKG ITLNIRGGEK
1301: IGVVGRTGGG KSTLIQVFFR LVEPAAGRIV IDGIDISRLG LHDLRSRFGI IPQEPVLFEG TVRSNIDPIG QYSDDEIWKS LDRCQLKEVV SSKPEKLDSP
1401: VVDNGDNWSV GQRQLLCLGR VMLKRSRLLF MDEATASVDS QTDAVIQKII REDFNACTII SIAHRIPTVM DCDRVLVVDA GIAKEFDKPS HLLERPSLFG
1501: ALVQEYANRS SEL
0101: LWFKLSLILS AILAVCSIVL CILVLGVSNR SPWKVIDGVY WLCQAITHVV ITILIAHEKR FRAVSHPMSL RVFWIVNFVV MSLFFGCGVT RLVSFKEIDP
0201: NLRMDDISSF FAFPISVVLF IVAIKGSTGV AVISDSETHI EDETNGYDES LVEKSSVTGF ASASLLSKTF WLWMNPLLQK GYKSPLKIDE VPSLSPHHKA
0301: DKMSQLFERN WPKPEENSKH PVRTTLLRCF WKEVAFTATL AVIRVCVMYV GPTLINRFVD YTAGKRTSPY EGYYLIGTLL IAKFVEVLTS HQFNFNSQKL
0401: GMLIRSTLVT SLYRKGLRLS CSARQAHGVG QIVNYMAVDA QQLSDMMLQL HSIWLMPLQV SVALAILYTS LGASTVVTLA GLAAVMAFVV FGTKRNNRFQ
0501: SNIMKNRDSR MKATNEMLNY MRVIKFQAWE EHFNKRIQSF RESEYTWLSN FLYSIAGNIV VLWSAPLLVA TLTFGSAILL GIPLDAGTVF TATALFKMLQ
0601: EPIRAFPRSM ISLSQAMISL ERLDKYMISK ELVDKSVERL EGCGSTVAMK VKDGTFGWDD DNSEETLKDI NFEIRKGDLA AVVGTVGSGK SSLLASVLGE
0701: MHKLSGQVTV CGSTAYVAQT SWIQNGTIEE NILFGMRMNK DRYKEVIRVC CLEKDLEMME FGDQTEIGER GINLSGGQKQ RIQLARAVYQ DCDIYLLDDV
0801: FSAVDAHTGS EIFKECVRGI LKDKTILLVT HQVDFLHNID LILVMRDGMI VQSGKYNELL EAGMDFKALV AAHETSLELV DVETNNESTA SLEVSKSSRR
0901: LSRQGEENGE DNSQQSTSDR GNSKLIKEEE RETGKVSLVV YKQYVTEAFG WWGVVLVLLF SFLWQGSLMA SDYWLAYETS ADRAMSFNPS LFIEIYGIIA
1001: LVSSVLIVAR MYFVTLMGLK TAQIFFGKIL HSILHAPMSF FDTTPSGRIL SRASNDQTNI DVFLPFFMNL TLAMFVTLLG IIIITCQYSW PTTLLLIPLG
1101: WLNVWYRGYY LATSRELTRL DSITKAPVIH HFSESISGVM TIRCFRKQEM FSQENVNRVD ANLRMDFHNN GSNEWLGFRL ELLGSLLLCV SAMFMIILPS
1201: SIIKPENVGL SLSYGLSLNS VLFWSVFVSC FVENKMVSVE RLKQFSCIPS EAEWRKRDFV PPSDWPNHGN VELEDLQVRY RPNTPLVLKG ITLNIRGGEK
1301: IGVVGRTGGG KSTLIQVFFR LVEPAAGRIV IDGIDISRLG LHDLRSRFGI IPQEPVLFEG TVRSNIDPIG QYSDDEIWKS LDRCQLKEVV SSKPEKLDSP
1401: VVDNGDNWSV GQRQLLCLGR VMLKRSRLLF MDEATASVDS QTDAVIQKII REDFNACTII SIAHRIPTVM DCDRVLVVDA GIAKEFDKPS HLLERPSLFG
1501: ALVQEYANRS SEL
0001: MWLLSSSPWL SELSCSYSAV VEHTSSVPVP IQWLRFVLLS PCPQRALFSA VDFIFLLCFA LHKLFSSPSS SSEINGHAEI RKPLIGIRGR TPTRTTAWFK
0101: TTVAVTVLLS FCSVVLCVLA FTGKRRTQRP WNLIDPLFWL IHAVTHLVIA VLVLHQKRFA ALNHPLSLRI YWISSFVLTS LFAVTGIFHF LSDAATSLRA
0201: EDVASFFSFP LTAFLLIASV RGITGLVTAE TNSPTKPSDA VSVEKSDNVS LYASASVFSK TFWLWMNPLL SKGYKSPLTL EQVPTLSPEH KAERLALLFE
0301: SSWPKPSENS SHPIRTTLLR CFWKEILFTA ILAIVRLGVM YVGPVLIQSF VDFTSGKRSS PWQGYYLVLI LLVAKFVEVL TTHQFNFDSQ KLGMLIRSTL
0401: ITALYKKGLK LTGSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTVALVLLY GSLGASVITA VIGLTGVFVF ILLGTQRNNG YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL KFRDMEFGWL SKFLYSIAGN IIVLWSTPVL ISALTFATAL ALGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSEDAVE RALGCDGNTA VEVRDGSFSW DDEDNEPALS DINFKVKKGE LTAIVGTVGS GKSSLLASVL GEMHRISGQV
0701: RVCGSTGYVA QTSWIENGTV QDNILFGLPM VREKYNKVLN VCSLEKDLQM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQECDVYLLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMRDG KIVESGKYDE LVSSGLDFGE LVAAHETSME LVEAGADSAA VATSPRTPTS PHASSPRTSM
0901: ESPHLSDLND EHIKSFLGSH IVEDGSKLIK EEERETGQVS LGVYKQYCTE AYGWWGIVLV LFFSLTWQGS LMASDYWLAY ETSAKNAISF DASVFILGYV
1001: IIALVSIVLV SIRSYYVTHL GLKTAQIFFR QILNSILHAP MSFFDTTPSG RILSRASTDQ TNVDILIPFM LGLVVSMYTT LLSIFIVTCQ YAWPTAFFVI
1101: PLGWLNIWYR NYYLASSREL TRMDSITKAP IIHHFSESIA GVMTIRSFRK QELFRQENVK RVNDNLRMDF HNNGSNEWLG FRLELVGSWV LCISALFMVL
1201: LPSNVIRPEN VGLSLSYGLS LNSVLFFAIY MSCFVENKMV SVERIKQFTD IPSESEWERK ETLPPSNWPF HGNVHLEDLK VRYRPNTPLV LKGITLDIKG
1301: GEKVGVVGRT GSGKSTLIQV LFRLVEPSGG KIIIDGIDIS TLGLHDLRSR FGIIPQEPVL FEGTVRSNID PTEQYSDEEI WKSLERCQLK DVVATKPEKL
1401: DSLVVDNGEN WSVGQRQLLC LGRVMLKRSR LLFLDEATAS VDSQTDAVIQ KIIREDFASC TIISIAHRIP TVMDGDRVLV IDAGKAKEFD SPARLLERPS
1501: LFAALVQEYA LRSAGI
0101: TTVAVTVLLS FCSVVLCVLA FTGKRRTQRP WNLIDPLFWL IHAVTHLVIA VLVLHQKRFA ALNHPLSLRI YWISSFVLTS LFAVTGIFHF LSDAATSLRA
0201: EDVASFFSFP LTAFLLIASV RGITGLVTAE TNSPTKPSDA VSVEKSDNVS LYASASVFSK TFWLWMNPLL SKGYKSPLTL EQVPTLSPEH KAERLALLFE
0301: SSWPKPSENS SHPIRTTLLR CFWKEILFTA ILAIVRLGVM YVGPVLIQSF VDFTSGKRSS PWQGYYLVLI LLVAKFVEVL TTHQFNFDSQ KLGMLIRSTL
0401: ITALYKKGLK LTGSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTVALVLLY GSLGASVITA VIGLTGVFVF ILLGTQRNNG YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL KFRDMEFGWL SKFLYSIAGN IIVLWSTPVL ISALTFATAL ALGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSEDAVE RALGCDGNTA VEVRDGSFSW DDEDNEPALS DINFKVKKGE LTAIVGTVGS GKSSLLASVL GEMHRISGQV
0701: RVCGSTGYVA QTSWIENGTV QDNILFGLPM VREKYNKVLN VCSLEKDLQM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQECDVYLLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMRDG KIVESGKYDE LVSSGLDFGE LVAAHETSME LVEAGADSAA VATSPRTPTS PHASSPRTSM
0901: ESPHLSDLND EHIKSFLGSH IVEDGSKLIK EEERETGQVS LGVYKQYCTE AYGWWGIVLV LFFSLTWQGS LMASDYWLAY ETSAKNAISF DASVFILGYV
1001: IIALVSIVLV SIRSYYVTHL GLKTAQIFFR QILNSILHAP MSFFDTTPSG RILSRASTDQ TNVDILIPFM LGLVVSMYTT LLSIFIVTCQ YAWPTAFFVI
1101: PLGWLNIWYR NYYLASSREL TRMDSITKAP IIHHFSESIA GVMTIRSFRK QELFRQENVK RVNDNLRMDF HNNGSNEWLG FRLELVGSWV LCISALFMVL
1201: LPSNVIRPEN VGLSLSYGLS LNSVLFFAIY MSCFVENKMV SVERIKQFTD IPSESEWERK ETLPPSNWPF HGNVHLEDLK VRYRPNTPLV LKGITLDIKG
1301: GEKVGVVGRT GSGKSTLIQV LFRLVEPSGG KIIIDGIDIS TLGLHDLRSR FGIIPQEPVL FEGTVRSNID PTEQYSDEEI WKSLERCQLK DVVATKPEKL
1401: DSLVVDNGEN WSVGQRQLLC LGRVMLKRSR LLFLDEATAS VDSQTDAVIQ KIIREDFASC TIISIAHRIP TVMDGDRVLV IDAGKAKEFD SPARLLERPS
1501: LFAALVQEYA LRSAGI
Arabidopsis Description
ABCC4ABC transporter C family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DM58]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.