Factsheet for Bra018722.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 5
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93660	Canola	plastid	99.47	99.47
Bra032248.1-P	Field mustard	plasma membrane, plastid	85.38	89.94
AT2G47800.1	Thale cress	plasma membrane	89.26	89.38
Bra007695.1-P	Field mustard	plastid	81.95	80.94
VIT_07s0005g00260.t01	Wine grape	plasma membrane	63.7	75.84
KRH31883	Soybean	plastid	68.91	69.69
GSMUA_Achr2P02280_001	Banana	cytosol, golgi, plasma membrane	51.25	67.42
KRG96433	Soybean	endoplasmic reticulum	66.73	67.35
Solyc09g075020.2.1	Tomato	plastid	66.86	67.09
PGSC0003DMT400029581	Potato	plasma membrane	66.86	66.43
TraesCS2A01G056800.1	Wheat	plasma membrane	40.45	61.9
KXG32483	Sorghum	plasma membrane	61.59	61.84
TraesCS5B01G479900.1	Wheat	golgi	61.07	61.51
TraesCS5D01G480600.1	Wheat	plasma membrane	61.0	61.49
TraesCS5A01G467600.1	Wheat	plasma membrane	60.87	61.4
Zm00001d009243_P001	Maize	mitochondrion	60.67	61.03
Os04t0209200-01	Rice	plasma membrane	49.74	59.08
Os01t0356400-01	Rice	plasma membrane	59.22	58.87
HORVU2Hr1G009680.2	Barley	plastid	40.18	55.05
TraesCS2B01G069000.2	Wheat	plastid	53.49	53.04
EES10452	Sorghum	plastid	53.69	52.61
Zm00001d004361_P001	Maize	plasma membrane	52.96	52.34
Os04t0209300-01	Rice	plasma membrane	50.92	51.12
TraesCSU01G014100.1	Wheat	plasma membrane	50.2	50.66
TraesCS2A01G056900.1	Wheat	plasma membrane, plastid	49.41	50.44
TraesCS2A01G057100.1	Wheat	plasma membrane	49.74	50.27
Zm00001d025043_P004	Maize	plasma membrane, plastid	49.87	49.67
HORVU2Hr1G009580.3	Barley	plastid	44.07	45.29
Bra001490.1-P	Field mustard	plasma membrane	39.26	40.3
Bra015291.1-P	Field mustard	plasma membrane	39.66	39.92
Bra039368.1-P	Field mustard	plasma membrane	38.74	39.81
Bra001488.1-P	Field mustard	plasma membrane, plastid	39.13	39.79
Bra039348.1-P	Field mustard	plasma membrane	37.88	39.3
Bra034706.1-P	Field mustard	plasma membrane	37.35	38.49
Bra003402.1-P	Field mustard	plastid	37.88	38.49
Bra036682.1-P	Field mustard	golgi, plasma membrane	36.36	38.36
Bra023893.1-P	Field mustard	plasma membrane	35.64	37.39
Bra007434.1-P	Field mustard	golgi, plasma membrane, plastid	35.7	37.35
Bra031267.1-P	Field mustard	plasma membrane	35.97	37.3
Bra014879.1-P	Field mustard	plasma membrane	30.43	30.56
Bra010773.1-P	Field mustard	plasma membrane	31.42	30.0
Bra005402.1-P	Field mustard	plasma membrane	31.49	29.4
Bra032385.1-P	Field mustard	plasma membrane	31.16	29.14
Bra032386.1-P	Field mustard	plasma membrane	26.35	27.7
Bra012617.1-P	Field mustard	plasma membrane	26.09	27.69

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra018722	EnsemblPlants:Bra018722.1	EnsemblPlants:Bra018722.1-P	GO:GO:0000166
GO:GO:0000325	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005794	GO:GO:0005886	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150	GO:GO:0009414
GO:GO:0009506	GO:GO:0009605	GO:GO:0009607	GO:GO:0009611	GO:GO:0009624	GO:GO:0009628
GO:GO:0009987	GO:GO:0010118	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M4DQC9
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24223	PANTHER:PTHR24223:SF215	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix
UniParc:UPI000253ED59	SEG:seg	:	:	:	:

Description

AT2G47800 (E=0.0) ATMRP4, EST3 | ATMRP4 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 4); ATPase, coupled to transmembrane movement of substances / folic acid transporter

Coordinates

chrA06:+:2328489..2333877

Molecular Weight (calculated)

169986.0 Da

IEP (calculated)

7.917

GRAVY (calculated)

0.183

Length

1518 amino acids

Sequence
(BLAST)

0001: MWWFSSSPSM WLTELSCSSS AVIESTSSLP VAIQWLRFVF LSPCPQRVLF SAVDLLFIVL LLFFALHKLF RPSSSTVNRN ADVTKPLLEN RGRIQTRTTA
0101: WFKTTVVAVV LSSFCSVVVC VLAFTGKRRT QRPWNVIDPT FWLIHAVTNA VIAVLVLHEK RLAALSHPLS LRIYWLSSFA VTALFAVSGI LRFLSAGSDV
0201: EDVASFLSFP LTVFLLIVSV RGTNGVIITT EERNGIKPDD VVLEKSDNVS LYASASAFSK MFWLWMNPLL SKGYKSPLTL EQVPTLAPEH KAERLALVFE
0301: SNWPKPSENS NHPVRTTLIR CFWKEILFTA ILAIVRLCVM YVGPVLIQSF VDFTSGKRSS PLQGYYLVLV LLVAKFVEVL TTHQFNFNSQ KLGMLIRSTL
0401: ITALYKKGLK LTSSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTLALVLLY GSLGASVVTA VVGLTGVFVF ILLGTKRNNR YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL NFRDMEFGWL SKFLYSISGN IIVLWSTPVL ISALTFATAL FLGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSNEAVE RSIGCDGRVA VEVRDGSFSW DDEDNVPALK DINFKVNKGE LTAIVGTVGS GKSSLLASVL GEMHRITGQV
0701: RVCGSTGYVA QTSWIQNGTV QDNILFGLPM VREKYNEVLS VCCLEKDLQM MEFGDQTEIG ERGINLSGGQ KQRIQLARAV YQDCDVYFLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMREG KIVESGRYDE LVSSGLDFGE LVAAHETSME LVEAGAESSS AAATIITSPR PSSHPSSPRT
0901: SMDSPHLSDL NDEHVKSFLG SQTVEDGSKL IQEEQRETGQ VSLRVYKQYC TEAYGWWGIV FVVFFSLTWQ GSLMASDYWL AYETSAKNAV SFDASVFIRV
1001: YVIIALVSIV LVSLRSYYVT HLGLKTAQIF FRQILNSILH APMSFFDTTP SGRILSRAST DQTNVDIFIP FMLGLVASMY TTLLSIFIVT CQYAWPTIFF
1101: VIPLGWLNIW YRNYYLTSSR ELTRLDSITK APVIHHFSES IAGVMTIRSF RKHELFRQEN VKRVNANLRM DFHNNGSNEW LGFRLELIGS WVLCISALFM
1201: VMLPSNVIKP ENVGLSLSYG LSLNSVLFWA IYMSCFVENK MVSVERIKQF TDIPAEAEWE NKENLPPSNW PFHGNVHLED LKVRYRPNTP LVLKGITLDI
1301: KGGEKVGVVG RTGSGKSTLI QVLFRLVEPS GGRIVIDGID ICTLGLHDLR SRFGIIPQEP VLFEGTVRSN IDPTDQYSDE EIWKSLERCQ LKDVVATKPE
1401: KLDSLVVDSG ENWSVGQRQL LCLGRVMLKR SRLLFLDEAT ASVDSQTDAV IQKIIREDFE SCTIISIAHR IPTVMDCDRV LVIDAGKAKE FDSPARLLEK
1501: QSLFAALVQE YALRSAGI

Best Arabidopsis Sequence Match ( AT2G47800.1 )
(BLAST)

0001: MWLLSSSPWL SELSCSYSAV VEHTSSVPVP IQWLRFVLLS PCPQRALFSA VDFIFLLCFA LHKLFSSPSS SSEINGHAEI RKPLIGIRGR TPTRTTAWFK
0101: TTVAVTVLLS FCSVVLCVLA FTGKRRTQRP WNLIDPLFWL IHAVTHLVIA VLVLHQKRFA ALNHPLSLRI YWISSFVLTS LFAVTGIFHF LSDAATSLRA
0201: EDVASFFSFP LTAFLLIASV RGITGLVTAE TNSPTKPSDA VSVEKSDNVS LYASASVFSK TFWLWMNPLL SKGYKSPLTL EQVPTLSPEH KAERLALLFE
0301: SSWPKPSENS SHPIRTTLLR CFWKEILFTA ILAIVRLGVM YVGPVLIQSF VDFTSGKRSS PWQGYYLVLI LLVAKFVEVL TTHQFNFDSQ KLGMLIRSTL
0401: ITALYKKGLK LTGSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTVALVLLY GSLGASVITA VIGLTGVFVF ILLGTQRNNG YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL KFRDMEFGWL SKFLYSIAGN IIVLWSTPVL ISALTFATAL ALGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSEDAVE RALGCDGNTA VEVRDGSFSW DDEDNEPALS DINFKVKKGE LTAIVGTVGS GKSSLLASVL GEMHRISGQV
0701: RVCGSTGYVA QTSWIENGTV QDNILFGLPM VREKYNKVLN VCSLEKDLQM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQECDVYLLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMRDG KIVESGKYDE LVSSGLDFGE LVAAHETSME LVEAGADSAA VATSPRTPTS PHASSPRTSM
0901: ESPHLSDLND EHIKSFLGSH IVEDGSKLIK EEERETGQVS LGVYKQYCTE AYGWWGIVLV LFFSLTWQGS LMASDYWLAY ETSAKNAISF DASVFILGYV
1001: IIALVSIVLV SIRSYYVTHL GLKTAQIFFR QILNSILHAP MSFFDTTPSG RILSRASTDQ TNVDILIPFM LGLVVSMYTT LLSIFIVTCQ YAWPTAFFVI
1101: PLGWLNIWYR NYYLASSREL TRMDSITKAP IIHHFSESIA GVMTIRSFRK QELFRQENVK RVNDNLRMDF HNNGSNEWLG FRLELVGSWV LCISALFMVL
1201: LPSNVIRPEN VGLSLSYGLS LNSVLFFAIY MSCFVENKMV SVERIKQFTD IPSESEWERK ETLPPSNWPF HGNVHLEDLK VRYRPNTPLV LKGITLDIKG
1301: GEKVGVVGRT GSGKSTLIQV LFRLVEPSGG KIIIDGIDIS TLGLHDLRSR FGIIPQEPVL FEGTVRSNID PTEQYSDEEI WKSLERCQLK DVVATKPEKL
1401: DSLVVDNGEN WSVGQRQLLC LGRVMLKRSR LLFLDEATAS VDSQTDAVIQ KIIREDFASC TIISIAHRIP TVMDGDRVLV IDAGKAKEFD SPARLLERPS
1501: LFAALVQEYA LRSAGI

Arabidopsis Description

ABCC4ABC transporter C family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DM58]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.