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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64080 Canola plasma membrane 87.68 99.92
AT3G60970.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 65.73 93.26
AT3G60160.1 Thale cress plasma membrane 89.83 89.11
PGSC0003DMT400011214 Potato cytosol 8.77 78.92
PGSC0003DMT400080270 Potato mitochondrion 56.22 73.23
VIT_15s0021g00220.t01 Wine grape plasma membrane 67.6 66.89
KRH48930 Soybean endoplasmic reticulum 64.52 64.14
PGSC0003DMT400056413 Potato mitochondrion 58.84 62.92
KRH66359 Soybean plasma membrane 62.58 61.43
Solyc10g024420.1.1 Tomato golgi, nucleus, plasma membrane 60.64 61.34
Zm00001d002503_P001 Maize plasma membrane 59.77 57.99
HORVU2Hr1G105430.1 Barley cytosol, peroxisome, plasma membrane 59.1 57.41
TraesCS2B01G473000.1 Wheat endoplasmic reticulum 56.83 56.64
TraesCS2A01G451500.1 Wheat plasma membrane 57.97 56.34
KXG27008 Sorghum plasma membrane 59.91 56.11
KXG26126 Sorghum plasma membrane 55.76 55.98
Zm00001d026041_P005 Maize plasma membrane 50.0 55.91
TraesCS2A01G451300.1 Wheat plastid 58.84 55.42
Os04t0588700-01 Rice cytosol, plasma membrane 48.86 54.76
TraesCS2D01G451100.2 Wheat cytosol 59.17 54.37
TraesCS2B01G472800.1 Wheat cytosol, peroxisome, plasma membrane 59.24 53.28
Bra015291.1-P Field mustard plasma membrane 48.13 47.68
Bra001490.1-P Field mustard plasma membrane 47.05 47.53
Bra036682.1-P Field mustard golgi, plasma membrane 45.72 47.46
Bra001488.1-P Field mustard plasma membrane, plastid 47.05 47.09
Bra034706.1-P Field mustard plasma membrane 46.25 46.91
Bra039368.1-P Field mustard plasma membrane 46.12 46.65
Bra039348.1-P Field mustard plasma membrane 44.91 45.86
Bra007434.1-P Field mustard golgi, plasma membrane, plastid 38.55 39.7
Bra031267.1-P Field mustard plasma membrane 38.09 38.87
Bra032248.1-P Field mustard plasma membrane, plastid 37.42 38.79
Bra023893.1-P Field mustard plasma membrane 36.95 38.15
Bra018722.1-P Field mustard plasma membrane, plastid 38.49 37.88
Bra007695.1-P Field mustard plastid 37.82 36.76
Bra014879.1-P Field mustard plasma membrane 29.79 29.43
Bra010773.1-P Field mustard plasma membrane 30.79 28.93
Bra005402.1-P Field mustard plasma membrane 31.06 28.54
Bra032385.1-P Field mustard plasma membrane 30.99 28.53
Bra012617.1-P Field mustard plasma membrane 26.97 28.18
Bra032386.1-P Field mustard plasma membrane 25.23 26.11
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlantsGene:Bra003402EnsemblPlants:Bra003402.1EnsemblPlants:Bra003402.1-PGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640UniProt:M4CGR9
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24223PANTHER:PTHR24223:SF165SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelix
UniParc:UPI000254178BSEG:seg::::
Description
AT3G60160 (E=0.0) ATMRP9 | ATMRP9; ATPase, coupled to transmembrane movement of substances
Coordinates
chrA07:-:13033074..13038775
Molecular Weight (calculated)
167291.0 Da
IEP (calculated)
7.891
GRAVY (calculated)
0.102
Length
1494 amino acids
Sequence
(BLAST)
0001: MGLTQWLQLN SPCMKEHISI TMQLAFLAFF VIHFAWKRLG AVRNRGVHDT EEDLKKQSIT VKQSFSYKLS LLCSVSIFGT HCFVLLLLLQ NSVVPRCDSS
0101: VSVFSTEISQ ALSWLIVSLY VIKIKERRLL EFPWMLRSWW LCSFILSLTF TAHFITAKHH KPLGFKDYAD LTSLVASLFL VSLSIRGNTG LHLLESTEEV
0201: TEPLLLCSET EQIKKKTSSF SPYGNATLFQ RITFSWINPL FSLGYKKPLE KDDVPNIDVK DSAQTCSQAF DKNLKTTIEQ EGPGRAFFYK SVLRFVWKKA
0301: AINAVFAVVN ASTAYIGPYL INDFVVFLTE KQDQSLNYGY LLALGFLSAK IVETVTQRQW IFGARQLGMR LRAALISHIY QKGLLLSSQS RQSHTSGEII
0401: NYMSVDVQRI TDFIWYVNNI WMLPIQISAA IFILQKHLGL GAVAALVTTL MVMACNYPLT RIQRTYQSDI MNAKDERMKA TSEILKNMKI LKLQAWDNQF
0501: LNKVKRLRKK EYDCLWKSLR LQAFTTFILW GAPALISVVT FVTCMLIGVK LTSGAVLSAL ATFQMLQSPI FGLPDLLSAL VQSKVSADRI ASYLQQSETQ
0601: KDAVEYLSKD DTELSVEIEN GAFSWEPEAS RPTLDEIELR VKTGMKVAIC GAVGSGKSSL LSSILGEIQK LRGTVRVSGK QAYVPQSPWI LTGTIRDNIL
0701: FGSIYESEKY ERTVKACALI KDFELFSNGD MTEIGERGIN MSGGQKQRIQ IARAVYQDAD VYLLDDPFSA VDAHTGRQLF EECLMGILKE KTVLYVTHQV
0801: EFLPAADLIL VMQNGRVMQA GEFQELLKQN IGFEVLVGAH NEALDSILSI EKSSRNLKEE SNDDDDTSAI AESLQTQRDS EHNISTENKK KEAKLVQDEE
0901: TEKGVIGKEV YLAYLRTVKG GLLVPIIILA QSCFQMLQIA SNYWMAWTAP PTAESKPKMS MDKILLVYTL LAAGSSLCVL ARTILVAIGG LSTAEKFFSR
1001: MLCSIFRAPM SFFDSTPTGR ILNRVSTDQS VLDLEMAIKL GWCAFSIIQI VGTIFVMSQV AWQVCVIFIP VAVACVFYQR YYTPTARELS RMSGVERAPI
1101: LHHFAESLAG ATTIRAFDQR DRFISSNLTL IDNHSRPWFH VASAMEWLSF RLNLLSHFVF AFSLVLLVTL PEGVINPSIA GLGVTYGLSL NVLQATVIWN
1201: ICNAENKMIS VERILQYSKI PSEAPLVVDA HKPLDNWPNV GSIVFRDLQV RYAEHFPAVL KNITCEFPGG KKIGVVGRTG SGKSTLIQAL FRIVEPSQGT
1301: IVIDNVDITK IGLHDLRSRL GIIPQDPALF DGTVRVNLDP LAQYTDQELW EALDKCQLGD VLRAKEEKLN ATVVENGDNW SVGQRQLVCL GRVLLKKSNI
1401: LVLDEATASV DSATDGVIQK IITQEFKDRT VVTIAHRIHT VIESDLVLVL SDGRIAEFDS PAKLLEREDS FFSKLIKEYS MRSKHFTGSN NLLS
Best Arabidopsis Sequence Match ( AT3G60160.1 )
(BLAST)
0001: MFKPFGFAAE TGSHLLTTQW LQLGNSLCLK ERISIAMQVT FLAFFLIHLA LKWFGVVRNR GSNDVEEDLK KQSITVKQSF SYNISLLCSV SILGTHCFIL
0101: LLLFRDSVVS RCDSSVSVFS AEVSQSFSWL FVSVVVVKIR ERRLVKFPWM LRSWWLCSFI LSFSFDAHFI TAKHEPLEFQ DYADLTGLLA SLFLLAVSIR
0201: GKTGFHLLES SGNTEPLLLG DQTEQNKKDS YSSSSPYGNA TLFQRITFSW INPLFSLGYK RPLEKDDVPD IDVKDSARFC SHAFDQKLKT TKEKEGPGNA
0301: FFYNSVLRYV WRKAAINAVF AVVNASTAYI GPYLINDFVE FLSEKQSQSL NHGYLLALGF LTAKIVETVT QRQWIFGARQ LGLRLRAALI SHIYQKGLVL
0401: SSQSRQSHTS GEIINYMSVD VQRITDFIWY VNNIWMLPIQ IFSAIYILQK HLGLGALAAL VTTLMVMACN YPLTRLQRNY QSDIMNAKDD RMKATSEILK
0501: NMKILKLQAW DNQFLNKVKT LRKKEYDCLW KSLRLQAFTT FILWGAPSLI SVVTFVTCML MGVKLTAGAV LSALATFQML QSPIFGLPDL LSALVQSKVS
0601: ADRIASYLQQ SETQKDAVEY CSKDHTELSV EIENGAFSWE PESSRPTLDD IELKVKSGMK VAVCGAVGSG KSSLLSSILG EIQKLKGTVR VSGKQAYVPQ
0701: SPWILSGTIR DNILFGSMYE SEKYERTVKA CALIKDFELF SNGDLTEIGE RGINMSGGQK QRIQIARAVY QNADIYLLDD PFSAVDAHTG RELFEDCLMG
0801: ILKDKTVLYV THQVEFLPAA DLILVMQNGR VMQAGKFEEL LKQNIGFEVL VGAHNEALDS ILSIEKSSRN FKEGSKDDTA SIAESLQTHC DSEHNISTEN
0901: KKKEAKLVQD EETEKGVIGK EVYLAYLTTV KGGLLVPFII LAQSCFQMLQ IASNYWMAWT APPTAESIPK LGMGRILLVY ALLAAGSSLC VLARTILVAI
1001: GGLSTAETFF SRMLCSIFRA PMSFFDSTPT GRILNRASTD QSVLDLEMAV KLGWCAFSII QIVGTIFVMS QVAWQVCVIF IPVAVACVFY QRYYTPTARE
1101: LSRMSGVERA PILHHFAESL AGATTIRAFD QRDRFISSNL VLIDSHSRPW FHVASAMEWL SFRLNLLSHF VFAFSLVLLV TLPEGVINPS IAGLGVTYGL
1201: SLNVLQATVI WNICNAENKM ISVERILQYS KIPSEAPLVI DGHRPLDNWP NVGSIVFRDL QVRYAEHFPA VLKNITCEFP GGKKIGVVGR TGSGKSTLIQ
1301: ALFRIVEPSQ GTIVIDNVDI TKIGLHDLRS RLGIIPQDPA LFDGTIRLNL DPLAQYTDHE IWEAIDKCQL GDVIRAKDER LDATVVENGE NWSVGQRQLV
1401: CLGRVLLKKS NILVLDEATA SVDSATDGVI QKIINQEFKD RTVVTIAHRI HTVIESDLVL VLSDGRIAEF DSPAKLLQRE DSFFSKLIKE YSLRSNHFAG
1501: SNDLLS
Arabidopsis Description
ABCC9ABC transporter C family member 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.