Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G105430.1 | Barley | cytosol, peroxisome, plasma membrane | 91.02 | 96.23 |
| TraesCS2A01G451300.1 | Wheat | plastid | 93.42 | 95.78 |
| TraesCS2B01G472800.1 | Wheat | cytosol, peroxisome, plasma membrane | 95.88 | 93.86 |
| Zm00001d002503_P001 | Maize | plasma membrane | 77.61 | 81.95 |
| KXG27008 | Sorghum | plasma membrane | 79.09 | 80.63 |
| Zm00001d026041_P005 | Maize | plasma membrane | 65.01 | 79.12 |
| KXG26126 | Sorghum | plasma membrane | 68.7 | 75.07 |
| PGSC0003DMT400011214 | Potato | cytosol | 7.13 | 69.88 |
| PGSC0003DMT400080270 | Potato | mitochondrion | 47.91 | 67.92 |
| AT3G60970.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 43.42 | 67.05 |
| VIT_15s0021g00220.t01 | Wine grape | plasma membrane | 57.63 | 62.05 |
| KRH48930 | Soybean | endoplasmic reticulum | 55.1 | 59.61 |
| CDY64080 | Canola | plasma membrane | 47.72 | 59.19 |
| Bra003402.1-P | Field mustard | plastid | 54.37 | 59.17 |
| PGSC0003DMT400056413 | Potato | mitochondrion | 50.74 | 59.06 |
| CDX98408 | Canola | plasma membrane | 47.66 | 59.03 |
| AT3G60160.1 | Thale cress | plasma membrane | 54.12 | 58.43 |
| KRH66359 | Soybean | plasma membrane | 54.3 | 58.02 |
| Solyc10g024420.1.1 | Tomato | golgi, nucleus, plasma membrane | 52.46 | 57.75 |
| TraesCS1D01G309600.1 | Wheat | peroxisome | 39.42 | 49.92 |
| TraesCS2D01G420400.1 | Wheat | plasma membrane | 38.75 | 49.1 |
| TraesCS4D01G253300.3 | Wheat | plasma membrane | 42.87 | 46.97 |
| TraesCS3D01G129900.2 | Wheat | plasma membrane | 42.93 | 46.63 |
| TraesCS4D01G339000.2 | Wheat | golgi | 42.87 | 46.44 |
| TraesCS3D01G356300.2 | Wheat | plasma membrane | 41.82 | 46.23 |
| TraesCS7D01G114300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 28.04 | 44.23 |
| TraesCS3D01G387200.1 | Wheat | plasma membrane | 38.44 | 42.93 |
| TraesCS6D01G000300.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 32.35 | 41.85 |
| TraesCS7D01G115900.1 | Wheat | plasma membrane | 31.8 | 40.02 |
| TraesCS3D01G124700.1 | Wheat | peroxisome, plasma membrane, vacuole | 34.75 | 38.91 |
| TraesCS7D01G364700.1 | Wheat | cytosol, golgi, plasma membrane | 34.26 | 37.81 |
| TraesCS7D01G116300.2 | Wheat | plasma membrane | 34.44 | 37.81 |
| TraesCS5D01G480600.1 | Wheat | plasma membrane | 34.62 | 37.38 |
| TraesCS2D01G131000.1 | Wheat | plastid | 34.01 | 36.89 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF165 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2D01G451100 | EnsemblPlants:TraesCS2D01G451100.2 | TIGR:cd03244 |
| TIGR:cd03250 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:560958016..560965760
Molecular Weight (calculated)
180961.0 Da
IEP (calculated)
8.125
GRAVY (calculated)
0.087
Length
1626 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDMHIDPLCM HGAPDQSSRV KTAPHFFSGS SVTACSALHY TPKLRPSGPK GLSASSVYHR RHLSLPPSFP SLPLSLSLSL SLSLAFATDP HCAMDEGGGS
0101: LHSPLLARVQ EMFLLRAAAL LGDSPSSVVS QYLREWPEVY SPCFWTSTFV LIQLVFITSI VAQFLFKRIR WCRQRLKTAT PEINKHSNQE QKNADIKLGV
0201: SYQASKVCCL LILVTHVLRI FFLQLQGRIS GCKYPPFVPG EGIQVLSWII LSLAVFSLQK TKSAKHPLII RAWLILSFLQ SVTSVIFDLR FSLSDHGYVG
0301: FAELIDLFTL VICTYLFAVS ATGKTGVTSI NSSITEPLLS PSAGQQAETK RTCLYGRASV LDLVTFSWMG PLFAIGYKKP LDKNDVPDID ERDYADLLSD
0401: SFKRILADVE RRHGLSTLSI YRAMFLFIRR KAIINAVFAI LCACASYVGP SLINDLVRFL GGGRKYGLKK GYILAAAFLS AKVVETVAQR QWIFGARRLG
0501: MRLRAALISH IYQKGLRLSC SARQKHTSGE IINYMSVDIQ RITDVIWYTN YIWMLPIQLS LAVYVLYLNL GTGAWAGLAA TLVIMACNIP LTRLQKRLQS
0601: QIMAAKDNRM KATTEVLRSM KILKLQAWDT EYLQKLEALR MEEHNWLWKS VRLTALTTFI FWGSPAFISS ITFGTCILMG IPLTAGTVLS ALATFRMLQD
0701: PIFTLPDLLS VFAQGKVSAD RVAQYLQEEE LKDDAITEVS RSDTDYDVEI DHGAFSWELE TTSPTITDVN LKVKRGMKVA ICGMVGSGKS SLLSCILGEM
0801: PKLAGTVRVS GSRAYVPQTA WILSGNIRDN ILFGNPYDKE KYEKIIQACA LTKDLELFAN GDLTEIGERG INMSGGQKQR IQIARSVYED ADIYLFDDPF
0901: SAVDAHTGAQ LFKDCLMGLL KDKTILYVTH QVEFLPAADL ILVMQDGKIV QKGRFDDLLK QNIGFEAIVG AHSQAIDSVI NAESSSRILS TESQKLADSD
1001: DEFERENDTD DQVQGIIKQE SEHDVSQGVN EKGRLTQEEE REKGGIGKTV YWAYLTAVHG GALAPVIVAA QSFFQIFQVA SNYWMAWACP PTSATTPRVG
1101: LGLLLSVYIM LSIGSALCVF GRSILLSLVG LLTAEKFFKN MLHCILRAPM SFFDSTPTGR ILNRVSSDQS VLDLEIASKL GWCAFSVIQI LGTIGVMSQV
1201: AWPVFAIFIP VTAICYAFQR YYIPTARELA RLSQIQRAPI LHHFAESLTG AASIRAYGQK DRFSKANISL VNNHSRPWFH NISAVEWLCF RLNMLSNFVF
1301: AFSLTLLVSL PEGFINPSIA GLAVTYALNL NGQLSSITWN ICNTENKMIS VERIMQYSRI PSEAPLIVDD HRPPNSWPKD GTINIRNLEV RYAEHLPSVL
1401: RNISCTIPGR KKVGIVGRTG SGKSTLIQAL FRIVEPRVGT IEIDDVDLSK IGLHDLRGRL SIIPQDPTMF EGTVRGNLDP LNEYSDQHIW ETLDKCQLGD
1501: IVRQSPKKLD STVVENGENW SVGQRQLFCL GRVLLKRSNV LVLDEATASV DSSTDAIIQQ TLREEFGDCT VLTVAHRIHT VIDSDLILVF SEGRIIEYDT
1601: PSRLLEDENS EFSRLIKEYS RRSKGF
0101: LHSPLLARVQ EMFLLRAAAL LGDSPSSVVS QYLREWPEVY SPCFWTSTFV LIQLVFITSI VAQFLFKRIR WCRQRLKTAT PEINKHSNQE QKNADIKLGV
0201: SYQASKVCCL LILVTHVLRI FFLQLQGRIS GCKYPPFVPG EGIQVLSWII LSLAVFSLQK TKSAKHPLII RAWLILSFLQ SVTSVIFDLR FSLSDHGYVG
0301: FAELIDLFTL VICTYLFAVS ATGKTGVTSI NSSITEPLLS PSAGQQAETK RTCLYGRASV LDLVTFSWMG PLFAIGYKKP LDKNDVPDID ERDYADLLSD
0401: SFKRILADVE RRHGLSTLSI YRAMFLFIRR KAIINAVFAI LCACASYVGP SLINDLVRFL GGGRKYGLKK GYILAAAFLS AKVVETVAQR QWIFGARRLG
0501: MRLRAALISH IYQKGLRLSC SARQKHTSGE IINYMSVDIQ RITDVIWYTN YIWMLPIQLS LAVYVLYLNL GTGAWAGLAA TLVIMACNIP LTRLQKRLQS
0601: QIMAAKDNRM KATTEVLRSM KILKLQAWDT EYLQKLEALR MEEHNWLWKS VRLTALTTFI FWGSPAFISS ITFGTCILMG IPLTAGTVLS ALATFRMLQD
0701: PIFTLPDLLS VFAQGKVSAD RVAQYLQEEE LKDDAITEVS RSDTDYDVEI DHGAFSWELE TTSPTITDVN LKVKRGMKVA ICGMVGSGKS SLLSCILGEM
0801: PKLAGTVRVS GSRAYVPQTA WILSGNIRDN ILFGNPYDKE KYEKIIQACA LTKDLELFAN GDLTEIGERG INMSGGQKQR IQIARSVYED ADIYLFDDPF
0901: SAVDAHTGAQ LFKDCLMGLL KDKTILYVTH QVEFLPAADL ILVMQDGKIV QKGRFDDLLK QNIGFEAIVG AHSQAIDSVI NAESSSRILS TESQKLADSD
1001: DEFERENDTD DQVQGIIKQE SEHDVSQGVN EKGRLTQEEE REKGGIGKTV YWAYLTAVHG GALAPVIVAA QSFFQIFQVA SNYWMAWACP PTSATTPRVG
1101: LGLLLSVYIM LSIGSALCVF GRSILLSLVG LLTAEKFFKN MLHCILRAPM SFFDSTPTGR ILNRVSSDQS VLDLEIASKL GWCAFSVIQI LGTIGVMSQV
1201: AWPVFAIFIP VTAICYAFQR YYIPTARELA RLSQIQRAPI LHHFAESLTG AASIRAYGQK DRFSKANISL VNNHSRPWFH NISAVEWLCF RLNMLSNFVF
1301: AFSLTLLVSL PEGFINPSIA GLAVTYALNL NGQLSSITWN ICNTENKMIS VERIMQYSRI PSEAPLIVDD HRPPNSWPKD GTINIRNLEV RYAEHLPSVL
1401: RNISCTIPGR KKVGIVGRTG SGKSTLIQAL FRIVEPRVGT IEIDDVDLSK IGLHDLRGRL SIIPQDPTMF EGTVRGNLDP LNEYSDQHIW ETLDKCQLGD
1501: IVRQSPKKLD STVVENGENW SVGQRQLFCL GRVLLKRSNV LVLDEATASV DSSTDAIIQQ TLREEFGDCT VLTVAHRIHT VIDSDLILVF SEGRIIEYDT
1601: PSRLLEDENS EFSRLIKEYS RRSKGF
0001: MFKPFGFAAE TGSHLLTTQW LQLGNSLCLK ERISIAMQVT FLAFFLIHLA LKWFGVVRNR GSNDVEEDLK KQSITVKQSF SYNISLLCSV SILGTHCFIL
0101: LLLFRDSVVS RCDSSVSVFS AEVSQSFSWL FVSVVVVKIR ERRLVKFPWM LRSWWLCSFI LSFSFDAHFI TAKHEPLEFQ DYADLTGLLA SLFLLAVSIR
0201: GKTGFHLLES SGNTEPLLLG DQTEQNKKDS YSSSSPYGNA TLFQRITFSW INPLFSLGYK RPLEKDDVPD IDVKDSARFC SHAFDQKLKT TKEKEGPGNA
0301: FFYNSVLRYV WRKAAINAVF AVVNASTAYI GPYLINDFVE FLSEKQSQSL NHGYLLALGF LTAKIVETVT QRQWIFGARQ LGLRLRAALI SHIYQKGLVL
0401: SSQSRQSHTS GEIINYMSVD VQRITDFIWY VNNIWMLPIQ IFSAIYILQK HLGLGALAAL VTTLMVMACN YPLTRLQRNY QSDIMNAKDD RMKATSEILK
0501: NMKILKLQAW DNQFLNKVKT LRKKEYDCLW KSLRLQAFTT FILWGAPSLI SVVTFVTCML MGVKLTAGAV LSALATFQML QSPIFGLPDL LSALVQSKVS
0601: ADRIASYLQQ SETQKDAVEY CSKDHTELSV EIENGAFSWE PESSRPTLDD IELKVKSGMK VAVCGAVGSG KSSLLSSILG EIQKLKGTVR VSGKQAYVPQ
0701: SPWILSGTIR DNILFGSMYE SEKYERTVKA CALIKDFELF SNGDLTEIGE RGINMSGGQK QRIQIARAVY QNADIYLLDD PFSAVDAHTG RELFEDCLMG
0801: ILKDKTVLYV THQVEFLPAA DLILVMQNGR VMQAGKFEEL LKQNIGFEVL VGAHNEALDS ILSIEKSSRN FKEGSKDDTA SIAESLQTHC DSEHNISTEN
0901: KKKEAKLVQD EETEKGVIGK EVYLAYLTTV KGGLLVPFII LAQSCFQMLQ IASNYWMAWT APPTAESIPK LGMGRILLVY ALLAAGSSLC VLARTILVAI
1001: GGLSTAETFF SRMLCSIFRA PMSFFDSTPT GRILNRASTD QSVLDLEMAV KLGWCAFSII QIVGTIFVMS QVAWQVCVIF IPVAVACVFY QRYYTPTARE
1101: LSRMSGVERA PILHHFAESL AGATTIRAFD QRDRFISSNL VLIDSHSRPW FHVASAMEWL SFRLNLLSHF VFAFSLVLLV TLPEGVINPS IAGLGVTYGL
1201: SLNVLQATVI WNICNAENKM ISVERILQYS KIPSEAPLVI DGHRPLDNWP NVGSIVFRDL QVRYAEHFPA VLKNITCEFP GGKKIGVVGR TGSGKSTLIQ
1301: ALFRIVEPSQ GTIVIDNVDI TKIGLHDLRS RLGIIPQDPA LFDGTIRLNL DPLAQYTDHE IWEAIDKCQL GDVIRAKDER LDATVVENGE NWSVGQRQLV
1401: CLGRVLLKKS NILVLDEATA SVDSATDGVI QKIINQEFKD RTVVTIAHRI HTVIESDLVL VLSDGRIAEF DSPAKLLQRE DSFFSKLIKE YSLRSNHFAG
1501: SNDLLS
0101: LLLFRDSVVS RCDSSVSVFS AEVSQSFSWL FVSVVVVKIR ERRLVKFPWM LRSWWLCSFI LSFSFDAHFI TAKHEPLEFQ DYADLTGLLA SLFLLAVSIR
0201: GKTGFHLLES SGNTEPLLLG DQTEQNKKDS YSSSSPYGNA TLFQRITFSW INPLFSLGYK RPLEKDDVPD IDVKDSARFC SHAFDQKLKT TKEKEGPGNA
0301: FFYNSVLRYV WRKAAINAVF AVVNASTAYI GPYLINDFVE FLSEKQSQSL NHGYLLALGF LTAKIVETVT QRQWIFGARQ LGLRLRAALI SHIYQKGLVL
0401: SSQSRQSHTS GEIINYMSVD VQRITDFIWY VNNIWMLPIQ IFSAIYILQK HLGLGALAAL VTTLMVMACN YPLTRLQRNY QSDIMNAKDD RMKATSEILK
0501: NMKILKLQAW DNQFLNKVKT LRKKEYDCLW KSLRLQAFTT FILWGAPSLI SVVTFVTCML MGVKLTAGAV LSALATFQML QSPIFGLPDL LSALVQSKVS
0601: ADRIASYLQQ SETQKDAVEY CSKDHTELSV EIENGAFSWE PESSRPTLDD IELKVKSGMK VAVCGAVGSG KSSLLSSILG EIQKLKGTVR VSGKQAYVPQ
0701: SPWILSGTIR DNILFGSMYE SEKYERTVKA CALIKDFELF SNGDLTEIGE RGINMSGGQK QRIQIARAVY QNADIYLLDD PFSAVDAHTG RELFEDCLMG
0801: ILKDKTVLYV THQVEFLPAA DLILVMQNGR VMQAGKFEEL LKQNIGFEVL VGAHNEALDS ILSIEKSSRN FKEGSKDDTA SIAESLQTHC DSEHNISTEN
0901: KKKEAKLVQD EETEKGVIGK EVYLAYLTTV KGGLLVPFII LAQSCFQMLQ IASNYWMAWT APPTAESIPK LGMGRILLVY ALLAAGSSLC VLARTILVAI
1001: GGLSTAETFF SRMLCSIFRA PMSFFDSTPT GRILNRASTD QSVLDLEMAV KLGWCAFSII QIVGTIFVMS QVAWQVCVIF IPVAVACVFY QRYYTPTARE
1101: LSRMSGVERA PILHHFAESL AGATTIRAFD QRDRFISSNL VLIDSHSRPW FHVASAMEWL SFRLNLLSHF VFAFSLVLLV TLPEGVINPS IAGLGVTYGL
1201: SLNVLQATVI WNICNAENKM ISVERILQYS KIPSEAPLVI DGHRPLDNWP NVGSIVFRDL QVRYAEHFPA VLKNITCEFP GGKKIGVVGR TGSGKSTLIQ
1301: ALFRIVEPSQ GTIVIDNVDI TKIGLHDLRS RLGIIPQDPA LFDGTIRLNL DPLAQYTDHE IWEAIDKCQL GDVIRAKDER LDATVVENGE NWSVGQRQLV
1401: CLGRVLLKKS NILVLDEATA SVDSATDGVI QKIINQEFKD RTVVTIAHRI HTVIESDLVL VLSDGRIAEF DSPAKLLQRE DSFFSKLIKE YSLRSNHFAG
1501: SNDLLS
Arabidopsis Description
ABCC9ABC transporter C family member 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.