Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • endoplasmic reticulum 4
  • extracellular 3
  • vacuole 4
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400011214 Potato cytosol 12.35 78.31
CDX98408 Canola plasma membrane 90.88 72.89
CDY64080 Canola plasma membrane 90.41 72.62
AT3G60160.1 Thale cress plasma membrane 98.1 68.59
PGSC0003DMT400080270 Potato mitochondrion 73.6 67.57
Bra003402.1-P Field mustard plastid 93.26 65.73
VIT_15s0021g00220.t01 Wine grape plasma membrane 74.26 51.79
KRH48930 Soybean endoplasmic reticulum 71.6 50.17
PGSC0003DMT400056413 Potato mitochondrion 64.67 48.75
KRH66359 Soybean plasma membrane 69.8 48.29
Solyc10g024420.1.1 Tomato golgi, nucleus, plasma membrane 67.43 48.07
Os04t0588700-01 Rice cytosol, plasma membrane 59.83 47.26
Zm00001d002503_P001 Maize plasma membrane 67.81 46.36
TraesCS2B01G473000.1 Wheat endoplasmic reticulum 65.72 46.16
HORVU2Hr1G105430.1 Barley cytosol, peroxisome, plasma membrane 66.76 45.71
KXG26126 Sorghum plasma membrane 63.72 45.09
TraesCS2A01G451500.1 Wheat plasma membrane 65.72 45.02
KXG27008 Sorghum plasma membrane 67.62 44.64
TraesCS2A01G451300.1 Wheat plastid 66.76 44.33
TraesCS2D01G451100.2 Wheat cytosol 67.05 43.42
Zm00001d026041_P005 Maize plasma membrane 54.32 42.81
TraesCS2B01G472800.1 Wheat cytosol, peroxisome, plasma membrane 66.86 42.38
AT3G13080.1 Thale cress plasma membrane, plastid 57.08 39.7
AT1G04120.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 56.03 38.97
AT3G13100.1 Thale cress plasma membrane 54.7 38.58
AT3G59140.1 Thale cress plasma membrane 44.73 32.42
AT3G21250.4 Thale cress plasma membrane 45.2 32.38
AT2G47800.1 Thale cress plasma membrane 45.49 31.6
AT3G62700.1 Thale cress plasma membrane 44.73 30.6
AT1G30420.1 Thale cress plasma membrane 36.47 25.69
AT1G30410.1 Thale cress plasma membrane 36.37 25.57
AT2G07680.3 Thale cress plasma membrane 33.81 24.96
AT2G34660.1 Thale cress plasma membrane 37.42 24.28
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300EntrezGene:825269InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:AEE80133.1ArrayExpress:AT3G60970EnsemblPlantsGene:AT3G60970
RefSeq:AT3G60970TAIR:AT3G60970RefSeq:AT3G60970-TAIR-GEnsemblPlants:AT3G60970.1TAIR:AT3G60970.1Symbol:ATMRP15
Unigene:At.70338ProteinID:CAB94133.1GO:GO:0000166GO:GO:0000325GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005773GO:GO:0005774GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0008559GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0042908GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640RefSeq:NP_191656.2
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24223PANTHER:PTHR24223:SF165UniProt:Q7FB56SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0001E92D99SEG:seg:::
Description
ABCC15Putative ABC transporter C family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q7FB56]
Coordinates
chr3:+:22557282..22561716
Molecular Weight (calculated)
117258.0 Da
IEP (calculated)
6.652
GRAVY (calculated)
0.125
Length
1053 amino acids
Sequence
(BLAST)
0001: MSVDVQRITD FIWYVNSIWM LPIQIFSAIY ILQKHLGLGA LAALVTTLMV MACNYPLTRL QRNYQSDIMN AKDDRMKATS EILKNMKILK LQAWDNQFLN
0101: KVKTLRKKEY DCLWKSLRLQ DFTTFILWGA PSLISVVTFV TCMLMGVKLT AGAVLSALAT FQMLQSPIFG LPDLLSALVQ SKVSADRIAS YLQQSETQKD
0201: AVEYCSNDHT EFSVEIENGA FSWEPESSRP TLDDIELKVK SGMKVAICGA VGSGKSSLPS SILGEIQKLK GTVRVSGKQA YVPQSPWILS GTIRDNILFG
0301: SIYESEKYER TVKACALIKD FELFSNGDLT EIGERGINMS GGQKQRIQIA RAVYQNADIY LLDDPFSAVD AHTGRELFED CLMGILKDKT VLYVTHQVEF
0401: LPAADLILVM QNGRVMQAGK FEELLKQNIG FEVLTQCDSE HNISTENKKK EAKLVQDEET EKGVIGKEVY LTYLTTVKGG LLVPFIILAQ SCFQMLQIAS
0501: NYWMAWTAPP TAESIPKLGM GRILLVYALL AAGSSLCVLA RTILVAIGGL STAETFFSRM LCSIFRAPMS YFDSTPTGRI LNRASTDQSV LDLEMAVKLG
0601: WCAFSIIQIV GTIFVMSQVA WQVCVIFIPV AVACVFYQRY YTPTERELSR MSGVERAPIL HHFAESLAGA TTIRAFDQRD RFISSNLVLI DSHSRPWFHV
0701: ASAMEWLSFR LNLLSHFVFA FSLVLLVTLP EGVINPSIAG LGVTYGLSLN VLQATVIWNI CNAENKMISV ERILQHSKIP SEAPLVIDDQ RPLDNWPNVG
0801: SIVFRDLQVR YAEHFPAVLK NITCAFPGGK KIGVVGRTGS GKSTLIQALF RIVEPSHGTI VIDNVDITKI GLHDLRSRLG IIPQDNALFD GTIRLNLDPL
0901: AQYTDREIWE ALDKCQLGDV IRAKDEKLDA TVVENGENWS VGQRQLVCLG RVLLKKSNIL VLDEATASVD SATDGVIQKI INQEFKDRTV VTIAHRIHTV
1001: IESDLVLVLS DGRIAEFDSP AKLLQREDSF FSKLIKEYSL RSNHFAGSND LLS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.