Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63884 | Canola | plasma membrane | 65.04 | 78.88 |
| CDY43395 | Canola | plasma membrane | 77.03 | 78.5 |
| Bra039348.1-P | Field mustard | plasma membrane | 76.42 | 77.99 |
| Zm00001d048327_P001 | Maize | cytosol | 1.88 | 68.29 |
| KRH73882 | Soybean | plasma membrane | 57.6 | 66.56 |
| VIT_19s0015g00040.t01 | Wine grape | plasma membrane | 47.29 | 65.49 |
| PGSC0003DMT400057099 | Potato | endoplasmic reticulum, plasma membrane | 57.6 | 65.15 |
| AT3G13080.1 | Thale cress | plasma membrane, plastid | 65.91 | 64.99 |
| KXG31741 | Sorghum | plasma membrane | 52.85 | 62.97 |
| KRG98556 | Soybean | nucleus | 53.99 | 61.95 |
| KRH14256 | Soybean | plasma membrane | 61.69 | 61.65 |
| KRG99624 | Soybean | plasma membrane | 61.35 | 61.56 |
| KRH46626 | Soybean | plasma membrane | 59.95 | 61.26 |
| KRH01233 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 53.45 | 61.1 |
| KRH73881 | Soybean | plasma membrane | 60.95 | 60.95 |
| TraesCS1A01G310100.1 | Wheat | cytosol | 30.74 | 60.88 |
| KRH46325 | Soybean | plasma membrane | 59.48 | 59.36 |
| KRH46324 | Soybean | plasma membrane | 59.28 | 58.88 |
| OQU92792 | Sorghum | plasma membrane | 53.99 | 58.79 |
| GSMUA_Achr10P... | Banana | plasma membrane | 50.23 | 58.5 |
| HORVU3Hr1G024210.3 | Barley | vacuole | 55.12 | 57.79 |
| KRH73880 | Soybean | plasma membrane | 46.95 | 57.13 |
| TraesCS1D01G309600.1 | Wheat | peroxisome | 48.89 | 56.85 |
| TraesCS1B01G321200.1 | Wheat | peroxisome | 48.83 | 56.78 |
| TraesCS2D01G420400.1 | Wheat | plasma membrane | 48.43 | 56.35 |
| TraesCS3A01G129000.1 | Wheat | plastid | 56.26 | 56.15 |
| Zm00001d008733_P001 | Maize | plasma membrane | 56.26 | 56.07 |
| TraesCS4B01G253200.1 | Wheat | plasma membrane | 55.66 | 56.07 |
| TraesCS4D01G253300.3 | Wheat | plasma membrane | 55.73 | 56.06 |
| Zm00001d020666_P004 | Maize | plasma membrane | 49.43 | 56.04 |
| Os02t0288400-00 | Rice | plasma membrane | 48.23 | 55.99 |
| TraesCS4A01G051100.1 | Wheat | plasma membrane | 55.79 | 55.98 |
| Os01t0173900-01 | Rice | plasma membrane | 56.33 | 55.88 |
| TraesCS3B01G148100.2 | Wheat | plasma membrane, plastid | 56.13 | 55.87 |
| TraesCS3D01G129900.2 | Wheat | plasma membrane | 55.99 | 55.84 |
| TraesCS2B01G442400.1 | Wheat | plasma membrane | 47.02 | 55.63 |
| HORVU3Hr1G085890.7 | Barley | plasma membrane | 54.05 | 54.94 |
| TraesCS3D01G356300.2 | Wheat | plasma membrane | 53.99 | 54.79 |
| AT3G60970.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 38.58 | 54.7 |
| TraesCS3B01G395000.2 | Wheat | plasma membrane | 53.72 | 54.63 |
| KXG40096 | Sorghum | plasma membrane | 54.79 | 54.14 |
| TraesCS3A01G362500.1 | Wheat | plasma membrane | 51.44 | 53.3 |
| Zm00001d048329_P003 | Maize | plasma membrane | 53.99 | 53.06 |
| AT1G04120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 46.82 | 46.17 |
| AT3G60160.1 | Thale cress | plasma membrane | 45.81 | 45.42 |
| AT3G59140.1 | Thale cress | plasma membrane | 37.64 | 38.68 |
| AT3G21250.4 | Thale cress | plasma membrane | 37.98 | 38.57 |
| AT2G47800.1 | Thale cress | plasma membrane | 38.45 | 37.86 |
| AT3G62700.1 | Thale cress | plasma membrane | 37.91 | 36.78 |
| AT2G07680.3 | Thale cress | plasma membrane | 29.34 | 30.72 |
| AT1G30420.1 | Thale cress | plasma membrane | 30.48 | 30.43 |
| AT1G30410.1 | Thale cress | plasma membrane | 30.01 | 29.91 |
| AT2G34660.1 | Thale cress | plasma membrane | 30.61 | 28.16 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | EntrezGene:820498 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AEE75296.1 | EMBL:AJ507129 | ArrayExpress:AT3G13100 |
| EnsemblPlantsGene:AT3G13100 | RefSeq:AT3G13100 | TAIR:AT3G13100 | RefSeq:AT3G13100-TAIR-G | EnsemblPlants:AT3G13100.1 | TAIR:AT3G13100.1 |
| Symbol:ATMRP7 | Unigene:At.39492 | ProteinID:BAB01401.1 | GO:GO:0000166 | GO:GO:0000325 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006855 |
| GO:GO:0008150 | GO:GO:0008559 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0042908 | GO:GO:0051707 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | RefSeq:NP_187917.3 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF00664 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007095 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025281 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF181 |
| UniProt:Q9LK62 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI00000A7582 |
| SEG:seg | : | : | : | : | : |
Description
ABCC7ABC transporter C family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK62]
Coordinates
chr3:-:4208729..4214530
Molecular Weight (calculated)
167814.0 Da
IEP (calculated)
6.916
GRAVY (calculated)
0.143
Length
1493 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKQSYAMDNP IVFFLLESNY FPMFSIFFNL LLLLVMFGSC VYKKRLGWEN SDAFTNERFK DMSLTYNKLV VICCETLSAL NSVLLLLSCF NLHKNGWDRS
0101: ELMILLDLLF TALSWGAISF YIRSQFTYSH DQKFPILLRV WWVLYFMFSC YRLLVDIALY KKQELVSVHL LLSDVLAVSV GLFLCYSCLQ KQGQGERINL
0201: LLEEPLLNGA ESSAATSVQL DKAEDDEVVT PFSNAGFLSH VSFSWMSPLI VLGNEKIIDS EDVPQVDNSD RAEKLFWIFR SKLEWDDGER RITTYKLIKA
0301: LFFSVWRDIL LSTLFAFVYT VSCYVAPYLM DTFVQYLNGQ RQYSNQGVVL VTTFFVAKLV ECQARRNWYF RLQKAGIGMR SVLVSMIYEK GLTLPCYSKQ
0401: GHTSGEIINL MTVDAERISA FSWYMHDPWI LVLQISLALL ILYRSLGLGS IAAFAATFLV MLGNIPLAKL EEKFQGNLME SKDNRMKKTS EALLNMRILK
0501: LQGWEMKFLH KILDLRGIEA GWLKKFVYNS AAISSVLWAA PSFVSATAFG ACMLLKIPLE SGKIIAALAT FRILQTPIYK LPDTISMIVQ TKVSLDRIAT
0601: FLCLDDLQQD GMERLPSGSS KMDVEVSNGA FSWDDSSPIP TLKDIRFKIP HGMNIAICGT VGSGKSSLLS SILGEVPKIS GNLKVCGRKA YIAQSPWIQS
0701: GKVEENILFG KPMQREWYQR VLEACSLNKD LEVFPFRDQT VIGERGINLS GGQKQRIQIA RALYQDADIY LFDDPFSAVD AHTGSHLFKE VLLGLLRNKT
0801: VIYVTHQLEF LPEADLILVM KDGRITQAGK YNEILESGTD FMELVGAHTD ALAAVDSYEK GSASAQSTTS KESKVSNDEE KQEEDLPSPK GQLVQEEERE
0901: KGKVGFTVYQ KYMKLAYGGA LVPIILVVQI LFQVLNIGSN YWMAWVTPVS KDVKPLVSGS TLILVYVFLA TASSFCILVR AMLSAMTGFK IATELFNQMH
1001: FRIFRASMSF FDATPIGRIL NRASTDQSAV DLRLPSQFSN LAIAAVNILG IIGVMGQVAW QVLIVFIPVI AACTWYRQYY ISAARELARL SGISRSPLVQ
1101: HFSETLSGIT TIRSFDQEPR FRTDIMRLND CYSRLRFHAI SAMEWLCFRL DLLSTVAFAL SLVILVSVPE GVINPSFAGL AVTYALNLNS LQATLIWTLC
1201: DLENKMISVE RMLQYIDIPS EPSLVIESTR PEKSWPCRGE ITICNLQVRY GPHLPMVLRG LTCTFRGGLK TGIVGRTGCG KSTLIQTLFR IVEPAAGEIR
1301: IDGINILTIG LHDLRSRLSI IPQEPTMFEG TVRSNLDPLE EYADDQIWEA LDKCQLGDEI RKKELKLDSP VSENGQNWSV GQRQLVCLGR VLLKRSKVLI
1401: LDEATASVDT ATDTLIQETL RQHFSGCTVI TIAHRISSVI DSDMVLLLDQ GLIEEHDSPA RLLEDKSSSF SKLVAEYTAS SDSRFKRSSM KTN
0101: ELMILLDLLF TALSWGAISF YIRSQFTYSH DQKFPILLRV WWVLYFMFSC YRLLVDIALY KKQELVSVHL LLSDVLAVSV GLFLCYSCLQ KQGQGERINL
0201: LLEEPLLNGA ESSAATSVQL DKAEDDEVVT PFSNAGFLSH VSFSWMSPLI VLGNEKIIDS EDVPQVDNSD RAEKLFWIFR SKLEWDDGER RITTYKLIKA
0301: LFFSVWRDIL LSTLFAFVYT VSCYVAPYLM DTFVQYLNGQ RQYSNQGVVL VTTFFVAKLV ECQARRNWYF RLQKAGIGMR SVLVSMIYEK GLTLPCYSKQ
0401: GHTSGEIINL MTVDAERISA FSWYMHDPWI LVLQISLALL ILYRSLGLGS IAAFAATFLV MLGNIPLAKL EEKFQGNLME SKDNRMKKTS EALLNMRILK
0501: LQGWEMKFLH KILDLRGIEA GWLKKFVYNS AAISSVLWAA PSFVSATAFG ACMLLKIPLE SGKIIAALAT FRILQTPIYK LPDTISMIVQ TKVSLDRIAT
0601: FLCLDDLQQD GMERLPSGSS KMDVEVSNGA FSWDDSSPIP TLKDIRFKIP HGMNIAICGT VGSGKSSLLS SILGEVPKIS GNLKVCGRKA YIAQSPWIQS
0701: GKVEENILFG KPMQREWYQR VLEACSLNKD LEVFPFRDQT VIGERGINLS GGQKQRIQIA RALYQDADIY LFDDPFSAVD AHTGSHLFKE VLLGLLRNKT
0801: VIYVTHQLEF LPEADLILVM KDGRITQAGK YNEILESGTD FMELVGAHTD ALAAVDSYEK GSASAQSTTS KESKVSNDEE KQEEDLPSPK GQLVQEEERE
0901: KGKVGFTVYQ KYMKLAYGGA LVPIILVVQI LFQVLNIGSN YWMAWVTPVS KDVKPLVSGS TLILVYVFLA TASSFCILVR AMLSAMTGFK IATELFNQMH
1001: FRIFRASMSF FDATPIGRIL NRASTDQSAV DLRLPSQFSN LAIAAVNILG IIGVMGQVAW QVLIVFIPVI AACTWYRQYY ISAARELARL SGISRSPLVQ
1101: HFSETLSGIT TIRSFDQEPR FRTDIMRLND CYSRLRFHAI SAMEWLCFRL DLLSTVAFAL SLVILVSVPE GVINPSFAGL AVTYALNLNS LQATLIWTLC
1201: DLENKMISVE RMLQYIDIPS EPSLVIESTR PEKSWPCRGE ITICNLQVRY GPHLPMVLRG LTCTFRGGLK TGIVGRTGCG KSTLIQTLFR IVEPAAGEIR
1301: IDGINILTIG LHDLRSRLSI IPQEPTMFEG TVRSNLDPLE EYADDQIWEA LDKCQLGDEI RKKELKLDSP VSENGQNWSV GQRQLVCLGR VLLKRSKVLI
1401: LDEATASVDT ATDTLIQETL RQHFSGCTVI TIAHRISSVI DSDMVLLLDQ GLIEEHDSPA RLLEDKSSSF SKLVAEYTAS SDSRFKRSSM KTN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.