Factsheet for TraesCS1A01G310100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82557	Canola	plasma membrane	39.66	59.56
CDY71198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	39.79	59.29
CDY51899	Canola	endoplasmic reticulum, plasma membrane, vacuole	42.04	58.27
TraesCS1D01G309600.1	Wheat	peroxisome	96.68	56.78
TraesCS1B01G321200.1	Wheat	peroxisome	96.55	56.7
Os02t0288400-00	Rice	plasma membrane	79.97	46.89
Zm00001d020666_P004	Maize	plasma membrane	78.78	45.1
CDX82552	Canola	plasma membrane	64.19	39.32
KRH73882	Soybean	plasma membrane	65.25	38.08
TraesCS7A01G119800.1	Wheat	plasma membrane	42.97	37.81
GSMUA_Achr10P...	Banana	plasma membrane	63.26	37.21
CDY63884	Canola	plasma membrane	60.74	37.21
PGSC0003DMT400057099	Potato	endoplasmic reticulum, plasma membrane	63.79	36.44
KRH01233	Soybean	cytosol, endoplasmic reticulum, plasma membrane	60.21	34.76
KRG98556	Soybean	nucleus	59.15	34.28
TraesCS2A01G056800.1	Wheat	plasma membrane	44.7	33.97
TraesCS3A01G362500.1	Wheat	plasma membrane	64.06	33.52
TraesCS3A01G129000.1	Wheat	plastid	66.45	33.49
KRG99624	Soybean	plasma membrane	65.92	33.4
KRH14256	Soybean	plasma membrane	65.92	33.27
TraesCS4A01G051100.1	Wheat	plasma membrane	65.52	33.2
KRH73881	Soybean	plasma membrane	65.38	33.02
KRH46626	Soybean	plasma membrane	63.79	32.92
Bra001490.1-P	Field mustard	plasma membrane	63.93	32.59
KRH46325	Soybean	plasma membrane	64.59	32.55
KRH46324	Soybean	plasma membrane	64.32	32.27
Bra001488.1-P	Field mustard	plasma membrane, plastid	63.79	32.22
Bra039368.1-P	Field mustard	plasma membrane	62.86	32.09
AT3G13080.1	Thale cress	plasma membrane, plastid	64.32	32.03
Bra034706.1-P	Field mustard	plasma membrane	61.67	31.57
CDY43395	Canola	plasma membrane	60.21	30.99
AT3G13100.1	Thale cress	plasma membrane	60.88	30.74
Bra039348.1-P	Field mustard	plasma membrane	59.42	30.62
VIT_19s0015g00040.t01	Wine grape	plasma membrane	40.72	28.48
KRH73880	Soybean	plasma membrane	46.15	28.36
TraesCS5A01G512500.2	Wheat	endoplasmic reticulum, plasma membrane	53.98	28.24
TraesCS7A01G119500.1	Wheat	cytosol, peroxisome, plasma membrane	43.63	25.91
TraesCS2A01G451500.1	Wheat	plasma membrane	52.65	25.83
CDY44021	Canola	plastid	59.28	25.79
CDY23565	Canola	plastid	59.42	25.79
TraesCS2A01G451300.1	Wheat	plastid	53.32	25.35
TraesCS3A01G393500.1	Wheat	cytosol, peroxisome, plasma membrane	49.47	25.27
TraesCS4A01G227600.1	Wheat	cytosol, golgi, mitochondrion, plasma membrane	37.8	24.46
TraesCS5A01G467600.1	Wheat	plasma membrane	45.62	22.86
TraesCS2A01G056900.1	Wheat	plasma membrane, plastid	44.83	22.73
TraesCS3A01G123000.1	Wheat	plasma membrane	43.63	22.6
TraesCS7A01G358100.1	Wheat	plasma membrane	43.5	22.28
TraesCS7A01G118900.2	Wheat	plasma membrane	43.77	22.28
TraesCS2A01G057100.1	Wheat	plasma membrane	44.16	22.17
TraesCS2A01G128500.1	Wheat	plasma membrane	43.63	22.01
TraesCS7A01G119000.1	Wheat	plasma membrane	43.37	21.81
TraesCS1A01G404300.1	Wheat	plasma membrane	35.28	16.55

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24223	PANTHER:PTHR24223:SF249	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G310100	EnsemblPlants:TraesCS1A01G310100.1	TIGR:cd03244	SEG:seg

Description

No Description!

Coordinates

chr1A:-:500828042..500833457

Molecular Weight (calculated)

84221.8 Da

IEP (calculated)

5.704

GRAVY (calculated)

0.196

Length

754 amino acids

Sequence
(BLAST)

001: MLAKHLEDNI LFGTEMNRER YEKVLEACSL IKDLDILPFG DQTIIGERGI NLSGGQKQRI QIARALYHDA DIYLFDDPFS AVDAHTGLHL FKECLLGFLA
101: SKTVVYVTHH VEFLPSADVI MVLKDGKIIQ AGDYTEILNS GKEFTELIVS HKDALSTMDM LELPSSNYES SCHLNGNGST LPIADEQTHD NNEEVLVQNG
201: QLVQEEEREK GRVGFIVYWK YITMAHKGAF VPLILLAQII FQSLQIGSNL WMAWAAPVSK DVNPPVNSSM MINVYVALAL VTSLCVFIRS YLLVMAGCKT
301: AIMLFDKMHQ CIFRAPMSFF DSTPSGRILN RASTDQSAVD TQIYDLMGYL LFPAIEILGT IILMSRVAWP VFVIFVPVII ASLSYQQYYL SAARELQRLT
401: GVCRAPVMQH FAESIAGTTI IRCFDKKREF ISWTGQLMDN LSRATLYNAA AMEWLCFRLD FLSSFIFGFA LILLVTLAAD LIDSKTAGLA VTYGLSLNML
501: IGWAILVLCA LENRMISVER ILQYMTIPSE PPLTISESRP DCHWPTKGEI ELRNLHVKYA PHLPLVLKGV TCTFSGGMKT GIVGRTGGGK STLIQTLFRI
601: VDPCIGQILI DGVDISTIGL HDLRTRLSII PQDPVMFEGT LRSNIDPLDE YSDEQIWEAL DCCHLGDEVR KNELKLDSTV TENGENWSAG QRQLVCLGRV
701: ILKRRRILVL DEATSSVDPI TDGLIQKTLK QQFAECTVIT IAHLVSHRFL IARG

Best Arabidopsis Sequence Match ( AT3G13080.1 )
(BLAST)

0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQRYYIA AARELSRLVG VCKAPLIQHF SETISGATTI RSFSQEFRFR SDNMRLSDGY SRPKFYTAGA MEWLCFRLDM LSSLTFVFSL VFLVSIPTGV
1201: IDPSLAGLAV TYGLSLNTLQ AWLIWTLCNL ENKIISVERI LQYASVPSEP PLVIESNRPE QSWPSRGEVE IRDLQVRYAP HMPLVLRGIT CTFKGGLRTG
1301: IVGRTGSGKS TLIQTLFRIV EPSAGEIRID GVNILTIGLH DLRLRLSIIP QDPTMFEGTM RSNLDPLEEY TDDQIWEALD KCQLGDEVRK KEQKLDSSVS
1401: ENGDNWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS DMVLLLSNGI IEEYDTPVRL LEDKSSSFSK
1501: LVAEYTSRSS SSFD

Arabidopsis Description

ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.