CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82557	Canola	plasma membrane	93.48	94.22
CDY51899	Canola	endoplasmic reticulum, plasma membrane, vacuole	96.84	90.07
Zm00001d048327_P001	Maize	cytosol	5.53	68.29
CDX82552	Canola	plasma membrane	99.41	40.86
TraesCS1A01G310100.1	Wheat	cytosol	59.29	39.79
AT3G13080.1	Thale cress	plasma membrane, plastid	95.26	31.84
KRH73882	Soybean	plasma membrane	80.43	31.5
KXG31741	Sorghum	plasma membrane	74.9	30.25
GSMUA_Achr10P...	Banana	plasma membrane	76.48	30.19
CDY63884	Canola	plasma membrane	73.32	30.14
PGSC0003DMT400057099	Potato	endoplasmic reticulum, plasma membrane	78.06	29.92
CDY39771	Canola	endoplasmic reticulum, plasma membrane, vacuole	61.07	28.88
KRG98556	Soybean	nucleus	71.34	27.75
KRH01233	Soybean	cytosol, endoplasmic reticulum, plasma membrane	71.15	27.57
KRH46626	Soybean	plasma membrane	79.45	27.52
KRG99624	Soybean	plasma membrane	80.83	27.49
KRH73881	Soybean	plasma membrane	79.45	26.93
KRH14256	Soybean	plasma membrane	79.25	26.84
OQU92792	Sorghum	plasma membrane	72.53	26.77
HORVU3Hr1G024210.3	Barley	vacuole	74.11	26.33
KRH46325	Soybean	plasma membrane	77.67	26.27
KRH46324	Soybean	plasma membrane	76.88	25.88
TraesCS1D01G309600.1	Wheat	peroxisome	65.61	25.86
TraesCS2D01G420400.1	Wheat	plasma membrane	64.82	25.57
TraesCS1B01G321200.1	Wheat	peroxisome	64.62	25.47
Os02t0288400-00	Rice	plasma membrane	64.43	25.35
Zm00001d008733_P001	Maize	plasma membrane	74.51	25.17
TraesCS3A01G129000.1	Wheat	plastid	74.11	25.07
TraesCS3B01G148100.2	Wheat	plasma membrane, plastid	74.31	25.07
TraesCS3D01G129900.2	Wheat	plasma membrane	73.91	24.98
CDY43395	Canola	plasma membrane	71.94	24.85
CDY72149	Canola	cytosol, peroxisome, plasma membrane	30.04	24.84
TraesCS4B01G253200.1	Wheat	plasma membrane	72.33	24.7
TraesCS4D01G253300.3	Wheat	plasma membrane	72.13	24.6
Os01t0173900-01	Rice	plasma membrane	73.12	24.58
TraesCS3A01G362500.1	Wheat	plasma membrane	69.96	24.57
KXG40096	Sorghum	plasma membrane	73.32	24.55
Zm00001d020666_P004	Maize	plasma membrane	63.83	24.53
TraesCS4A01G051100.1	Wheat	plasma membrane	71.74	24.4
TraesCS2B01G442400.1	Wheat	plasma membrane	60.08	24.09
TraesCS3D01G356300.2	Wheat	plasma membrane	69.96	24.07
TraesCS3B01G395000.2	Wheat	plasma membrane	69.57	23.98
HORVU3Hr1G085890.7	Barley	plasma membrane	69.57	23.96
Zm00001d048329_P003	Maize	plasma membrane	71.74	23.9
CDX98408	Canola	plasma membrane	61.86	23.84
CDY64080	Canola	plasma membrane	61.66	23.8
CDY23565	Canola	plastid	74.31	21.65
CDY44021	Canola	plastid	73.91	21.58
CDX71911	Canola	plasma membrane	49.01	21.38
CDY06021	Canola	plasma membrane	48.62	21.13
CDX89842	Canola	plasma membrane	61.86	20.76
CDY18207	Canola	plasma membrane	61.86	20.74
CDY23680	Canola	plasma membrane	50.99	19.24
CDY03309	Canola	golgi	54.15	19.09
CDY27531	Canola	plasma membrane	52.77	18.8
CDY37305	Canola	plasma membrane	52.77	18.8
CDY06441	Canola	plasma membrane	51.78	17.88
CDX76656	Canola	plasma membrane, plastid	51.58	17.65
CDY11440	Canola	plastid	51.38	17.51
CDY43277	Canola	plastid	50.99	17.22
KRH73880	Soybean	plasma membrane	41.3	17.03
CDX93660	Canola	plastid	50.79	16.93
VIT_19s0015g00040.t01	Wine grape	plasma membrane	33.99	15.96
CDX98202	Canola	plasma membrane	38.54	13.37
CDY01519	Canola	plasma membrane	37.35	13.21
CDY09589	Canola	plasma membrane	38.93	13.19
CDY31633	Canola	plasma membrane	41.9	13.04
CDX84290	Canola	plasma membrane	41.9	13.01
CDY02289	Canola	plasma membrane	41.3	12.88
CDY09591	Canola	plasma membrane	41.3	12.87
CDY12054	Canola	plasma membrane	41.11	12.82
CDX90247	Canola	plasma membrane	40.91	12.75
CDY02290	Canola	plasma membrane	39.13	12.26
CDX77595	Canola	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	GO:A0A078JUG8	UniProt:A0A078JUG8	InterPro:AAA+_ATPase
InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	EnsemblPlants:CDY71198	ProteinID:CDY71198	ProteinID:CDY71198.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00012090001	InterPro:IPR003439	InterPro:IPR011527
InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24223	PANTHER:PTHR24223:SF181	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix
UniParc:UPI0004EED3B7	:	:	:	:	:

Description

BnaCnng71820DBnaCnng71820D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUG8]

Coordinates

chrLK044881:+:2..2108

Molecular Weight (calculated)

56338.0 Da

IEP (calculated)

6.427

GRAVY (calculated)

0.079

Length

506 amino acids

Sequence
(BLAST)

001: ATLLVTAGYK TATELFHKMH HCIFRSPMSF FDSTPSGRIM NRASTDQSAV DLDIPYQFGS VAITVIQLIG IIGVMSQVSW LVFLVFIPVV AASIWYQRYY
101: IAAARELSRL VGVCKAPLIQ HFAETISGST TIRSFNQESR FRGDNMRLSD GYSRPKFYSA GAMEWLCFRL DMLSSLTFAF SLVFLISIPT GVIDPSLAGL
201: AVTYGLSLNT LQAWLIWTLC NLENKIISVE RILQYASVPS EPPLVIESNR PEQSWPSRGQ VDIHDLQVRY APHMPLVLRG ITCTFKGGLR TGIVGRTGSG
301: KSTLIQTLFR IVEPSAGEIK IDGVNILNIG LHDLRLRLSI IPQDPTMFEG TVRSNLDPLE EYTDDQIWEA LDKCQLGDEV RKKDLKLDSS VSENGENWSM
401: GQRQLVCLGR VLLKRSKILV LDEATASVDT ATDNLIQKTL REHFSDCTVI TIAHRISSVI DSDMVLLLSN GIIEEYDSPV KLLENKSSSF SKLVAEYTAR
501: SSSSFD

Best Arabidopsis Sequence Match ( AT3G13080.1 )
(BLAST)

0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQRYYIA AARELSRLVG VCKAPLIQHF SETISGATTI RSFSQEFRFR SDNMRLSDGY SRPKFYTAGA MEWLCFRLDM LSSLTFVFSL VFLVSIPTGV
1201: IDPSLAGLAV TYGLSLNTLQ AWLIWTLCNL ENKIISVERI LQYASVPSEP PLVIESNRPE QSWPSRGEVE IRDLQVRYAP HMPLVLRGIT CTFKGGLRTG
1301: IVGRTGSGKS TLIQTLFRIV EPSAGEIRID GVNILTIGLH DLRLRLSIIP QDPTMFEGTM RSNLDPLEEY TDDQIWEALD KCQLGDEVRK KEQKLDSSVS
1401: ENGDNWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS DMVLLLSNGI IEEYDTPVRL LEDKSSSFSK
1501: LVAEYTSRSS SSFD

Arabidopsis Description

ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.