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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039348.1-P Field mustard plasma membrane 98.36 98.5
CDY63884 Canola plasma membrane 78.36 93.26
AT3G13100.1 Thale cress plasma membrane 78.5 77.03
CDX82557 Canola plasma membrane 25.05 73.11
CDY71198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.85 71.94
CDY51899 Canola endoplasmic reticulum, plasma membrane, vacuole 26.48 71.32
Zm00001d048327_P001 Maize cytosol 1.91 68.29
CDX82552 Canola plasma membrane 57.13 67.99
KRH73882 Soybean plasma membrane 56.38 63.93
PGSC0003DMT400057099 Potato endoplasmic reticulum, plasma membrane 55.43 61.52
CDY44021 Canola plastid 72.56 61.34
KXG31741 Sorghum plasma membrane 52.15 60.97
CDY23565 Canola plastid 72.22 60.91
VIT_19s0015g00040.t01 Wine grape plasma membrane 44.71 60.76
TraesCS1A01G310100.1 Wheat cytosol 30.99 60.21
KRG99624 Soybean plasma membrane 60.34 59.41
KRG98556 Soybean nucleus 52.63 59.26
KRH01233 Soybean cytosol, endoplasmic reticulum, plasma membrane 52.7 59.11
KRH46626 Soybean plasma membrane 58.84 59.0
KRH14256 Soybean plasma membrane 60.07 58.9
KRH73881 Soybean plasma membrane 60.0 58.87
OQU92792 Sorghum plasma membrane 53.92 57.62
KRH46325 Soybean plasma membrane 58.5 57.29
GSMUA_Achr10P... Banana plasma membrane 49.62 56.71
KRH46324 Soybean plasma membrane 58.16 56.69
HORVU3Hr1G024210.3 Barley vacuole 54.61 56.18
Os02t0288400-00 Rice plasma membrane 49.08 55.91
TraesCS1B01G321200.1 Wheat peroxisome 48.94 55.84
TraesCS1D01G309600.1 Wheat peroxisome 48.94 55.84
TraesCS2D01G420400.1 Wheat plasma membrane 48.46 55.34
Zm00001d020666_P004 Maize plasma membrane 49.42 54.97
TraesCS4B01G253200.1 Wheat plasma membrane 55.49 54.86
TraesCS4D01G253300.3 Wheat plasma membrane 55.56 54.85
TraesCS4A01G051100.1 Wheat plasma membrane 55.63 54.77
Zm00001d008733_P001 Maize plasma membrane 55.97 54.74
TraesCS3A01G129000.1 Wheat plastid 55.77 54.61
TraesCS3B01G148100.2 Wheat plasma membrane, plastid 55.9 54.6
TraesCS3D01G129900.2 Wheat plasma membrane 55.7 54.51
KRH73880 Soybean plasma membrane 45.53 54.36
TraesCS2B01G442400.1 Wheat plasma membrane 46.83 54.36
Os01t0173900-01 Rice plasma membrane 55.77 54.29
CDY39771 Canola endoplasmic reticulum, plasma membrane, vacuole 39.59 54.21
HORVU3Hr1G085890.7 Barley plasma membrane 53.45 53.3
TraesCS3B01G395000.2 Wheat plasma membrane 53.38 53.27
TraesCS3D01G356300.2 Wheat plasma membrane 53.45 53.23
KXG40096 Sorghum plasma membrane 54.4 52.75
Zm00001d048329_P003 Maize plasma membrane 53.99 52.07
TraesCS3A01G362500.1 Wheat plasma membrane 50.85 51.7
CDX98408 Canola plasma membrane 41.91 46.76
CDY64080 Canola plasma membrane 41.84 46.76
CDX89842 Canola plasma membrane 47.58 46.22
CDY18207 Canola plasma membrane 47.51 46.12
CDY03309 Canola golgi 44.71 45.64
CDX71911 Canola plasma membrane 34.61 43.71
CDY06021 Canola plasma membrane 34.54 43.47
CDY23680 Canola plasma membrane 37.68 41.16
CDY43277 Canola plastid 39.66 38.78
CDY37305 Canola plasma membrane 37.47 38.66
CDX76656 Canola plasma membrane, plastid 38.98 38.61
CDY27531 Canola plasma membrane 37.41 38.59
CDX93660 Canola plastid 39.8 38.41
CDY11440 Canola plastid 38.91 38.38
CDY06441 Canola plasma membrane 38.16 38.16
CDY72149 Canola cytosol, peroxisome, plasma membrane 13.86 33.17
CDY09589 Canola plasma membrane 30.44 29.87
CDX98202 Canola plasma membrane 29.56 29.68
CDY01519 Canola plasma membrane 28.94 29.63
CDY09591 Canola plasma membrane 32.15 29.0
CDY12054 Canola plasma membrane 32.08 28.96
CDY02289 Canola plasma membrane 32.01 28.9
CDY31633 Canola plasma membrane 32.01 28.84
CDX84290 Canola plasma membrane 31.95 28.73
CDX90247 Canola plasma membrane 31.67 28.57
CDY02290 Canola plasma membrane 30.58 27.74
CDX77595 Canola extracellular 1.64 11.94
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300GO:A0A078HXY5UniProt:A0A078HXY5InterPro:AAA+_ATPase
InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY43395ProteinID:CDY43395
ProteinID:CDY43395.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00076468001InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF181SMART:SM00382SUPFAM:SSF52540
SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0004EDC939SEG:seg::
Description
BnaA01g30260DBnaA01g30260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXY5]
Coordinates
chrLK032554:-:208273..214123
Molecular Weight (calculated)
164031.0 Da
IEP (calculated)
6.631
GRAVY (calculated)
0.234
Length
1465 amino acids
Sequence
(BLAST)
0001: MSQWPMKTSV QSQRGIILVN SLPHSPMENP LDFLLIQPMY LPLLSFFLNL VLLLILFGSW VYNKKVACEN SDDFMAKRST KMSSTFSKLV VMCCVSLSVF
0101: YSVLSLLSCV RWHSNVWTLF DLLLAALTWG AISMYLRGLY TDSHEQKLPY LLRVWWVLYV LLSCYRLVVD FVLYKKQELV SVHIVVSDLV GVCAGLLLCC
0201: SCLWKQGEGE RNNLLEEPLL IENEVCDDEV TTPFSKAGFL SLVSFSWMSP LVTLGNEKII DSKDVPQVDS SDRAENLFRV FRSKLEWDDG ERRITTFKLV
0301: KALFLSVWRD ILLSFLFAFV STMSCYVAPY LMDSFVQYLN GERQYKHQGY VLVTTFFVAK LVECQTRRHW YFRGGKAGLG MKAVLVSMIY EKGLTLPCHS
0401: KQGQGQTSGE IINLMAVDAD RLDAFTWFMH DPWILVLQVS LALWILYNSL GLGSVAAFPA FILVMLANYP FAKLEDKFQS NLMKSKDNRM KKTSEVLLNM
0501: RILKLQGWEM KFLSKILDLR HVEAGWLKKF VYNSAAMSSV LLTAPSFISA TAFGACVLLK IPLESGKILA ALAIFQILQS PIYKLPETIS MFVQVKVSLG
0601: RIASFLCLDD LRNDVVERLT YSEMALEVRN GSFSWDDSSS IPTLRDVSFE VSQGMNVAVC GTVGSGKSSL LSSILGEVPK ISGTVKVCGR KAYVAQSPWI
0701: QSGKVEDNIL FGKPMEREWY ERVLEACCLN KDLELLPFHD QTVIGERGIN LSGGQKQRIQ IARALYQNAD IYLFDDPFSA VDAHTGSHLF KEVILGILKD
0801: KTVIYVTHQV EFLPEADLIL VMKEGKITQA GRYNEILDSG TDFMELVGAH TDALATLEKD SGKPRGGQLV QQEEREKGKV GFIVYKKYMA LAYGGAVIPI
0901: ILLVQILFQV LDIGSNYWMT WVTPVSKDVE PWVSGFTLIL VYVVLAIASS LCILVRTLLV SMTGFKMATE LFTQMHLRVF RASMSFFDVT PMGRILNRAS
1001: TDQSVVDLSL PGQFAYVAVV AINILGIMGV MIHVAWQVLI IFIPVVAASS WYRQYYISAA RELARLAGIS RSPLVHHFSE TLSGVTTIRS FDQEPRFLSD
1101: IMKLSDCLSR LTFHSTGATE WLCFRLELLA TIAFALSLVI VVSAPDGTVN PSFAGLAITY ALNLNNLQSN LVWTLCELEN KMISVERMLQ YIDIPSEPSL
1201: VIESTRPEKS WPSHGEITIS NLQVRYGPHL PMVLHGLTCT FPGGLKTGIV GRTGCGKSTL IQTLFRIVEP TAGEIRIDGI DILTIGLHDL RSRLSIIPQD
1301: PTMFEGTVRS NLDPLEEYSD DQIWEALDKC QLGVEVRKKE LKLDSPVSEN GQNWSVGQRQ LVCLGRVLLK SSKVLVLDEA TASVDTATDN LIQETLRQHF
1401: ADCTVITIAH RISSVIDSDM VLLLDQGLIK EHDSPARLLE DKSSSFSKLV AEYTTSSESK FSSSC
Best Arabidopsis Sequence Match ( AT3G13090.1 )
(BLAST)
0001: MENPIDSLLL QPIYLSVLSF FLNLVLLLIL FGSWLFKKRV ACEDTDAIMN EEFKHISFSY NKLVLICCVS LSVFYSVLSL LSCLHWHTNG WPFLDLLLAA
0101: LTWGSISVYL FGRYTNSCEQ KVLFLLRVWW VFFFVVSCYH LVVDFVLYKK QEMVSVHFVI SDLVGVCAGL FLCCSCLWKK GEGERIDLLK EPLLSSAESS
0201: DNEEVTAPFS KAGILSRMSF SWMSPLITLG NEKIIDIKDV PQLDRSDTTE SLFWIFRSKL EWDDGERRIT TFKLIKALFL SVWRDIVLSA LLAFVYTVSC
0301: YVAPYLMDNF VQYLNGNRQY KNQGYVLVTT FFVAKLVECQ TQRQWFFRGQ KAGLGMRSVL VSMIYEKGLT LPCHSKQGHT SGEIINLMAV DADRISAFSW
0401: FMHDPWILVL QVSLALWILY KSLGLGSIAA FPATILVMLA NYPFAKLEEK FQSSLMKSKD NRMKKTSEVL LNMKILKLQG WEMKFLSKIL ELRHIEAGWL
0501: KKFVYNSSAI NSVLWAAPSF ISATAFGACL LLKIPLESGK ILAALATFRI LQGPIYKLPE TISMIVQTKV SLNRIASFLC LDDLQQDVVG RLPSGSSEMA
0601: VEISNGTFSW DDSSPIPTLR DMNFKVSQGM NVAICGTVGS GKSSLLSSIL GEVPKISGNL KVCGRKAYIA QSPWIQSGKV EENILFGKPM EREWYDRVLE
0701: ACSLNKDLEI LPFHDQTVIG ERGINLSGGQ KQRIQIARAL YQDADIYLFD DPFSAVDAHT GSHLFKEVLL GLLRHKTVIY VTHQVEFLPE ADLILVMKDG
0801: KITQAGKYHE ILDSGTDFME LVGAHTEALA TIDSCETGYA SEKSTTDKEN EVLHHKEKQE NGSDNKPSGQ LVQEEEREKG KVGFTVYKKY MALAYGGAVI
0901: PLILVVQVLF QLLSIGSNYW MTWVTPVSKD VEPPVSGFTL ILVYVLLAVA SSFCILIRAL LVAMTGFKMA TELFTQMHLR IFRASMSFFD ATPMGRILNR
1001: ASTDQSVADL RLPGQFAYVA IAAINILGII GVIVQVAWQV LIVFIPVVAA CAWYRQYYIS AARELARLAG ISRSPVVHHF SETLSGITTI RSFDQEPRFR
1101: GDIMRLSDCY SRLKFHSTGA MEWLCFRLEL LSTFAFASSL VILVSAPEGV INPSLAGLAI TYALNLNTLQ ATLIWTLCDL ENKMISVERM LQYTNIPSEP
1201: PLVIETTRPE KSWPSRGEIT ICNLQVRYGP HLPMVLHGLT CTFPGGLKTG IVGRTGCGKS TLIQTLFRIV EPAAGEIRID GINILSIGLH DLRSRLSIIP
1301: QDPTMFEGTI RSNLDPLEEY TDDQIWEALD NCQLGDEVRK KELKLDSPVS ENGQNWSVGQ RQLVCLGRVL LKRSKLLVLD EATASIDTAT DNLIQETLRH
1401: HFADCTVITI AHRISSVIDS DMVLLLDQGL IKEHDSPARL LEDRSSLFSK LVAEYTTSSE SKSKRS
Arabidopsis Description
ABCC6ABC transporter C family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZZ4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.