Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02290 | Canola | plasma membrane | 98.06 | 90.65 |
| Bra032386.1-P | Field mustard | plasma membrane | 85.87 | 88.78 |
| CDY72149 | Canola | cytosol, peroxisome, plasma membrane | 35.1 | 85.62 |
| AT1G30410.1 | Thale cress | plasma membrane | 85.53 | 85.25 |
| AT1G30420.1 | Thale cress | plasma membrane | 83.86 | 83.75 |
| CDX98202 | Canola | plasma membrane | 81.25 | 83.14 |
| CDX77595 | Canola | extracellular | 9.98 | 74.13 |
| VIT_10s0003g04470.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 71.6 | 65.83 |
| CDY12054 | Canola | plasma membrane | 66.31 | 61.0 |
| CDY31633 | Canola | plasma membrane | 66.38 | 60.95 |
| CDX84290 | Canola | plasma membrane | 66.31 | 60.77 |
| CDX90247 | Canola | plasma membrane | 65.91 | 60.59 |
| CDY02289 | Canola | plasma membrane | 65.77 | 60.51 |
| EES12878 | Sorghum | plasma membrane | 65.91 | 60.48 |
| CDY09591 | Canola | plasma membrane | 65.77 | 60.47 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 51.64 | 60.42 |
| Os04t0620000-01 | Rice | plasma membrane | 65.24 | 59.86 |
| Zm00001d002275_P029 | Maize | plasma membrane | 65.3 | 59.85 |
| HORVU2Hr1G103620.1 | Barley | plasma membrane | 64.97 | 59.58 |
| TraesCS1A01G404300.1 | Wheat | plasma membrane | 62.02 | 57.62 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 52.31 | 53.68 |
| CDY71198 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 13.19 | 38.93 |
| CDX82557 | Canola | plasma membrane | 13.06 | 38.84 |
| CDY51899 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 13.33 | 36.58 |
| CDY39771 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.18 | 35.14 |
| CDX82552 | Canola | plasma membrane | 26.93 | 32.66 |
| CDY06021 | Canola | plasma membrane | 25.45 | 32.65 |
| CDX71911 | Canola | plasma membrane | 25.32 | 32.59 |
| CDY63884 | Canola | plasma membrane | 26.39 | 32.01 |
| CDY23680 | Canola | plasma membrane | 28.73 | 31.99 |
| CDX98408 | Canola | plasma membrane | 27.39 | 31.15 |
| CDY64080 | Canola | plasma membrane | 27.33 | 31.12 |
| CDX76656 | Canola | plasma membrane, plastid | 30.27 | 30.56 |
| CDY43395 | Canola | plasma membrane | 29.87 | 30.44 |
| CDY11440 | Canola | plastid | 30.07 | 30.24 |
| CDY37305 | Canola | plasma membrane | 28.73 | 30.21 |
| CDY27531 | Canola | plasma membrane | 28.67 | 30.14 |
| CDY18207 | Canola | plasma membrane | 30.27 | 29.95 |
| CDX89842 | Canola | plasma membrane | 30.21 | 29.91 |
| CDY43277 | Canola | plastid | 29.87 | 29.77 |
| CDY03309 | Canola | golgi | 28.6 | 29.76 |
| CDX93660 | Canola | plastid | 29.87 | 29.38 |
| CDY06441 | Canola | plasma membrane | 28.53 | 29.08 |
| CDY01519 | Canola | plasma membrane | 27.33 | 28.51 |
| CDY44021 | Canola | plastid | 28.6 | 24.64 |
| CDY23565 | Canola | plastid | 28.4 | 24.41 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | GO:A0A078F9C1 | UniProt:A0A078F9C1 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDY09589 | ProteinID:CDY09589 |
| ProteinID:CDY09589.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00031207001 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF251 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0004EDBE0D | SEG:seg | : | : |
Description
BnaC05g23300DBnaC05g23300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9C1]
Coordinates
chrLK031997:-:656965..664053
Molecular Weight (calculated)
167245.0 Da
IEP (calculated)
7.241
GRAVY (calculated)
0.120
Length
1493 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGFEAMAWYC KPVAQGFWEK TVDGAFGAYT PCVINTLVML VSQIVLLGLC LYRIWIIFCN AKAQLYVLRN KYYNCVLGIL ACYCAAEPVL RLVMRISLFS
0101: MDEETYLPPF EVASLIVEAS AWLSMLSLAG LETKRYVKEF RWYVRFGVVY VLVADAVLLD LVLPLNNSLN RTALYLCISS RCAQVLFGAM LLVYIPELDP
0201: YHGYHTLNNE SLDNVEYDVL PEGENICPER RAGFFTGIFF DWITPLMQLG YRKTLTEKDV WQLDKWDQTE TLIKRFQRCW IEESRRSKPW LLRALNKSLG
0301: GRFWFGGIFK IGHDLSQFVG PLILSQLLRA MQEDDPAWVG YVYAFLIFVG VTVGVLCQSQ YFQHVGRAAF RLRSTMVAAV FHKSLRLTHE ARKNFTSGKV
0401: TNMITADASA LQLIVEQLHG LWSAPFRIIM SIILLYQQLG VSSLFGSLIL FLLIPLQTLV INKMRKLTKE GLQWTDKRVG ITNEILASMD TVKCYAWEKS
0501: FESRIEGIRN EELSWFRKAQ LLSAFNSFIL NSTPVVVTVV SFGVFVLLGG ELTPARAFSS LSLFSVLRSP LNMLPNLLSQ AVNANVSLQR IEDLLLSEER
0601: VLAQNPPIQP GAPAISIKNG YFSWDSKTTK PTLSNINLEI PVGSLVAIVG GTGEGKTSLV SAMLGELSHG ETSNVIIRGS VAYVPQVSWI FNATVRENII
0701: FGSDFEPERY WKAIDVTALQ HDLDLLPGRD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VYIFDDPLSA LDAHVAQQVF DSCMKEELKG KTRILITNQL
0801: HLLPMMDRII LVSEGMIKEE GTFEELSGNG SLFQKLMENA GKMDAAQEMN KFDDEKILED PTVNVEIKLG STKQGEDGSS VLVKKEERES GIISWNVLMR
0901: YKNAVGGLWV VLILLACYVT TEALRLTSCT WLSFWTDQST SKSYSTGFYI VMFALFGFGQ VAVTFTNSFW LLTSSLHAAK TLHDSMLNSI LRAPMLFFDT
1001: NPTGRVINRF SKDIGDIDRT VANLMNMFMS QLWQLLSTFA LIGAVSTISL WSIMPLLILF YAAYLYYQNT SREVRRMDSV ARSPIYAQFG EALNGLSSIR
1101: AYKAYDRMAK INGKSVDNNI RFTLANTTCN RWLTIRLETL GGVMIWLTAT FAVMRSSNTE NQAGFASTMG LLLSYTLNIT TLMSGVLRQA SKAENSLNSV
1201: ERVGNYIDLP SEGAEIIESN RPVPGWPSRG SITFEDVHLR YRPGLPIVLH GLSFSVSPNE KVGVVGRTGA GKSSVLNALF RIVEVEKGRI MIDDYDVAKF
1301: GLTDLRRVLS IIPQSPVLFS GTVRFNIDPF DEHNDADLWE ALQRAHMKDV IARNPLGLDT EVSEGGENFS VGQRQLLSLV RALLRRSKIL VLDEATASVD
1401: VRTDTLIQRT IREEFKSCTM LVIAHRLNTI IDCDKILVLS SGQALEYDSP QELLSRDTSA FFGMVHSTGL ANAQHLCNLV FGGREVNGRR QKG
0101: MDEETYLPPF EVASLIVEAS AWLSMLSLAG LETKRYVKEF RWYVRFGVVY VLVADAVLLD LVLPLNNSLN RTALYLCISS RCAQVLFGAM LLVYIPELDP
0201: YHGYHTLNNE SLDNVEYDVL PEGENICPER RAGFFTGIFF DWITPLMQLG YRKTLTEKDV WQLDKWDQTE TLIKRFQRCW IEESRRSKPW LLRALNKSLG
0301: GRFWFGGIFK IGHDLSQFVG PLILSQLLRA MQEDDPAWVG YVYAFLIFVG VTVGVLCQSQ YFQHVGRAAF RLRSTMVAAV FHKSLRLTHE ARKNFTSGKV
0401: TNMITADASA LQLIVEQLHG LWSAPFRIIM SIILLYQQLG VSSLFGSLIL FLLIPLQTLV INKMRKLTKE GLQWTDKRVG ITNEILASMD TVKCYAWEKS
0501: FESRIEGIRN EELSWFRKAQ LLSAFNSFIL NSTPVVVTVV SFGVFVLLGG ELTPARAFSS LSLFSVLRSP LNMLPNLLSQ AVNANVSLQR IEDLLLSEER
0601: VLAQNPPIQP GAPAISIKNG YFSWDSKTTK PTLSNINLEI PVGSLVAIVG GTGEGKTSLV SAMLGELSHG ETSNVIIRGS VAYVPQVSWI FNATVRENII
0701: FGSDFEPERY WKAIDVTALQ HDLDLLPGRD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VYIFDDPLSA LDAHVAQQVF DSCMKEELKG KTRILITNQL
0801: HLLPMMDRII LVSEGMIKEE GTFEELSGNG SLFQKLMENA GKMDAAQEMN KFDDEKILED PTVNVEIKLG STKQGEDGSS VLVKKEERES GIISWNVLMR
0901: YKNAVGGLWV VLILLACYVT TEALRLTSCT WLSFWTDQST SKSYSTGFYI VMFALFGFGQ VAVTFTNSFW LLTSSLHAAK TLHDSMLNSI LRAPMLFFDT
1001: NPTGRVINRF SKDIGDIDRT VANLMNMFMS QLWQLLSTFA LIGAVSTISL WSIMPLLILF YAAYLYYQNT SREVRRMDSV ARSPIYAQFG EALNGLSSIR
1101: AYKAYDRMAK INGKSVDNNI RFTLANTTCN RWLTIRLETL GGVMIWLTAT FAVMRSSNTE NQAGFASTMG LLLSYTLNIT TLMSGVLRQA SKAENSLNSV
1201: ERVGNYIDLP SEGAEIIESN RPVPGWPSRG SITFEDVHLR YRPGLPIVLH GLSFSVSPNE KVGVVGRTGA GKSSVLNALF RIVEVEKGRI MIDDYDVAKF
1301: GLTDLRRVLS IIPQSPVLFS GTVRFNIDPF DEHNDADLWE ALQRAHMKDV IARNPLGLDT EVSEGGENFS VGQRQLLSLV RALLRRSKIL VLDEATASVD
1401: VRTDTLIQRT IREEFKSCTM LVIAHRLNTI IDCDKILVLS SGQALEYDSP QELLSRDTSA FFGMVHSTGL ANAQHLCNLV FGGREVNGRR QKG
0001: MGFEALNWYC KPVADGFWEK AVDGAFGAYT PCAIDSLVML VSHFVLLGLC FYRIWIIFHN TKAQIYVLRK KYYNCVLGLL ACYCVVEPVL RLVMGISLFD
0101: MDEETDFPPF EVASLMVEAF AWFSMLVLIG LETKQYVKEF RWYVRFGVLY VLVADAVLLD LVLPLKNSIN RTALYLFISS RCSQALFGIL LLIYIPELDP
0201: YPGYHIVNNE PLDNVEYDAL RGGEHICPER HASIFSRIYF GWITPLMQLG YRKPITEKDV WQLDKWDQTE TLIKRFQRCW TEESRRPKPW LLRALNNSLG
0301: GRFWLAGIFK IGNDLSQFVG PVILSHLLRS MQEGDPAWVG YVYAFIIFVG VTLGVLCEAQ YFQNVWRVGF RLRSTLVAAI FHKSLRLTHE ARKNFASGKV
0401: TNMITTDANA LQQISQQLHG LWSAPFRIIV SMILLYQQLG VASLFGSLIL FLLIPLQTLI ISKMRKLTKE GLQWTDKRVG ITNEILSSMD TVKCYAWEKS
0501: FESRIQGIRN EELSWFRKAQ LLSAFNSFIL NSIPVVVTVV SFGVFVLLGG DLTPARAFTS LSLFAVLRFP LNMLPNLLSQ VVNANVSLQR IEELLLSEER
0601: ILAQNPPLQP GTPAISIKNG YFSWDSKTTK PTLSDINLEI PVGTLVAIVG GTGEGKTSLI SAMLGELSHA ETTSVVIRGS VAYVPQVSWI FNATVRENIL
0701: FGSDFESERY WRAIDATALQ HDLDLLPGRD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VYIFDDPLSA LDAHVAHQVF DSCMKDELRG KTRVLVTNQL
0801: HFLPLMDKII LVSEGMIKEE GTFVELSKSG ILFKKLMENA GKMDATQEVN TNDENILKLG PTVTVDVSER NLGSTKQGKR RRSVLIKQEE RETGIISWNV
0901: LMRYKEAVGG LWVVMILLAC YLATEVLRVS SSTWLSIWTD QSTSKNYSPG FYIVVYALLG FGQVAVTFTN SFWLITSSLH AARRLHDAML SSILRAPMLF
1001: FHTNPTGRVI NRFSKDIGDI DRNVANLMNM FMNQLWQLLS TFALIGTVST ISLWAIMPLL ILFYAAYLYY QSTSREVRRL DSVTRSPIYA QFGEALNGLS
1101: SIRAYKAYDR MAKINGKSMD NNIRFTLANT SSNRWLTIRL ETLGGVMIWL TATFAVLQNG NTNNQAGFAS TMGLLLSYTL NITSLLSGVL RQASRAENSL
1201: NSVERVGNYI DLPSEATDII ENNRPVCGWP SGGSIKFEDV HLRYRPGLPP VLHGLTFFVS PSEKVGVVGR TGAGKSSMLN ALFRIVEVEK GRIMIDDCDV
1301: AKFGLTDVRR VLSIIPQSPV LFSGTVRFNI DPFSEHNDAG LWEALHRAHI KDVISRNPFG LDAEVCEGGE NFSVGQRQLL SLARALLRRS KILVLDEATA
1401: SVDVRTDSLI QRTIREEFKS CTMLVIAHRL NTIIDCDKIL VLSSGQVLEY DSPQELLSRD TSAFFRMVHS TGPANAQYLS NLVFERRENG MSVGG
0101: MDEETDFPPF EVASLMVEAF AWFSMLVLIG LETKQYVKEF RWYVRFGVLY VLVADAVLLD LVLPLKNSIN RTALYLFISS RCSQALFGIL LLIYIPELDP
0201: YPGYHIVNNE PLDNVEYDAL RGGEHICPER HASIFSRIYF GWITPLMQLG YRKPITEKDV WQLDKWDQTE TLIKRFQRCW TEESRRPKPW LLRALNNSLG
0301: GRFWLAGIFK IGNDLSQFVG PVILSHLLRS MQEGDPAWVG YVYAFIIFVG VTLGVLCEAQ YFQNVWRVGF RLRSTLVAAI FHKSLRLTHE ARKNFASGKV
0401: TNMITTDANA LQQISQQLHG LWSAPFRIIV SMILLYQQLG VASLFGSLIL FLLIPLQTLI ISKMRKLTKE GLQWTDKRVG ITNEILSSMD TVKCYAWEKS
0501: FESRIQGIRN EELSWFRKAQ LLSAFNSFIL NSIPVVVTVV SFGVFVLLGG DLTPARAFTS LSLFAVLRFP LNMLPNLLSQ VVNANVSLQR IEELLLSEER
0601: ILAQNPPLQP GTPAISIKNG YFSWDSKTTK PTLSDINLEI PVGTLVAIVG GTGEGKTSLI SAMLGELSHA ETTSVVIRGS VAYVPQVSWI FNATVRENIL
0701: FGSDFESERY WRAIDATALQ HDLDLLPGRD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VYIFDDPLSA LDAHVAHQVF DSCMKDELRG KTRVLVTNQL
0801: HFLPLMDKII LVSEGMIKEE GTFVELSKSG ILFKKLMENA GKMDATQEVN TNDENILKLG PTVTVDVSER NLGSTKQGKR RRSVLIKQEE RETGIISWNV
0901: LMRYKEAVGG LWVVMILLAC YLATEVLRVS SSTWLSIWTD QSTSKNYSPG FYIVVYALLG FGQVAVTFTN SFWLITSSLH AARRLHDAML SSILRAPMLF
1001: FHTNPTGRVI NRFSKDIGDI DRNVANLMNM FMNQLWQLLS TFALIGTVST ISLWAIMPLL ILFYAAYLYY QSTSREVRRL DSVTRSPIYA QFGEALNGLS
1101: SIRAYKAYDR MAKINGKSMD NNIRFTLANT SSNRWLTIRL ETLGGVMIWL TATFAVLQNG NTNNQAGFAS TMGLLLSYTL NITSLLSGVL RQASRAENSL
1201: NSVERVGNYI DLPSEATDII ENNRPVCGWP SGGSIKFEDV HLRYRPGLPP VLHGLTFFVS PSEKVGVVGR TGAGKSSMLN ALFRIVEVEK GRIMIDDCDV
1301: AKFGLTDVRR VLSIIPQSPV LFSGTVRFNI DPFSEHNDAG LWEALHRAHI KDVISRNPFG LDAEVCEGGE NFSVGQRQLL SLARALLRRS KILVLDEATA
1401: SVDVRTDSLI QRTIREEFKS CTMLVIAHRL NTIIDCDKIL VLSSGQVLEY DSPQELLSRD TSAFFRMVHS TGPANAQYLS NLVFERRENG MSVGG
Arabidopsis Description
ATMRP13multidrug resistance-associated protein 13 [Source:TAIR;Acc:AT1G30410]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.