Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90247 | Canola | plasma membrane | 98.64 | 98.58 |
| CDY09591 | Canola | plasma membrane | 94.45 | 94.4 |
| CDY02289 | Canola | plasma membrane | 94.33 | 94.33 |
| CDY31633 | Canola | plasma membrane | 86.63 | 86.47 |
| CDX84290 | Canola | plasma membrane | 86.69 | 86.37 |
| KRH11151 | Soybean | plasma membrane | 75.42 | 75.56 |
| KRH21096 | Soybean | endoplasmic reticulum | 75.29 | 75.43 |
| Solyc08g006880.2.1 | Tomato | nucleus | 74.92 | 74.78 |
| EES12878 | Sorghum | plasma membrane | 72.27 | 72.1 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 56.38 | 71.71 |
| HORVU2Hr1G103620.1 | Barley | plasma membrane | 71.9 | 71.68 |
| Zm00001d002275_P029 | Maize | plasma membrane | 71.9 | 71.64 |
| CDY72149 | Canola | cytosol, peroxisome, plasma membrane | 26.99 | 71.57 |
| Os04t0620000-01 | Rice | plasma membrane | 71.41 | 71.24 |
| TraesCS1A01G404300.1 | Wheat | plasma membrane | 68.21 | 68.89 |
| CDX98202 | Canola | plasma membrane | 61.37 | 68.27 |
| CDY09589 | Canola | plasma membrane | 61.0 | 66.31 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 57.49 | 64.12 |
| CDY02290 | Canola | plasma membrane | 62.29 | 62.6 |
| CDX77595 | Canola | extracellular | 5.98 | 48.26 |
| CDX82557 | Canola | plasma membrane | 12.75 | 41.24 |
| CDY71198 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 12.82 | 41.11 |
| CDY51899 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 13.25 | 39.52 |
| CDY39771 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.46 | 37.1 |
| CDX82552 | Canola | plasma membrane | 26.62 | 35.09 |
| CDY23680 | Canola | plasma membrane | 28.28 | 34.23 |
| CDX71911 | Canola | plasma membrane | 24.46 | 34.22 |
| CDY63884 | Canola | plasma membrane | 25.88 | 34.12 |
| CDY06021 | Canola | plasma membrane | 24.46 | 34.11 |
| CDY64080 | Canola | plasma membrane | 26.56 | 32.88 |
| CDX98408 | Canola | plasma membrane | 26.49 | 32.75 |
| CDX76656 | Canola | plasma membrane, plastid | 29.51 | 32.39 |
| CDY43395 | Canola | plasma membrane | 28.96 | 32.08 |
| CDY11440 | Canola | plastid | 29.27 | 31.99 |
| CDY03309 | Canola | golgi | 28.22 | 31.92 |
| CDY43277 | Canola | plastid | 29.45 | 31.91 |
| CDY37305 | Canola | plasma membrane | 27.85 | 31.83 |
| CDX89842 | Canola | plasma membrane | 29.45 | 31.7 |
| CDY27531 | Canola | plasma membrane | 27.73 | 31.69 |
| CDY18207 | Canola | plasma membrane | 29.39 | 31.61 |
| CDX93660 | Canola | plastid | 29.51 | 31.55 |
| CDY01519 | Canola | plasma membrane | 27.66 | 31.38 |
| CDY06441 | Canola | plasma membrane | 27.66 | 30.65 |
| CDY44021 | Canola | plastid | 27.6 | 25.85 |
| CDY23565 | Canola | plastid | 27.54 | 25.73 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | GO:A0A078FGE1 | UniProt:A0A078FGE1 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDY12054 | ProteinID:CDY12054 |
| ProteinID:CDY12054.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00061008001 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF251 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0004EEC1DD | SEG:seg | : |
Description
BnaC03g59700DBnaC03g59700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGE1]
Coordinates
chrLK032017:+:124804..133938
Molecular Weight (calculated)
182354.0 Da
IEP (calculated)
6.795
GRAVY (calculated)
0.029
Length
1623 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGFELLDWYC KPVPNGVWSK MVDYAFGAYT PCAIDSFVLG TSHLVLLILC LYRVWLTAKD FKVDKFCLRS KWYNYFLALL AAYSTAEPLF RLVMRISILD
0101: LDGAGFPPYE AFMLVLEAFA WGSALVMTVF ETKTYIHELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYGS FKLYIYISEV AVQVAFGTLL FVYFPNLDPY
0201: PGYTPLRTET SEDYEYEELP GGEQICPERH ASLFDRIFFS WLNPLMTLGS KRPLTEKDVW NLDTWDRTET LMRSFQRSWE KELEKPKPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNELLKSM QLNEPAWIGY IYAISIFVGV MFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RKKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIVA LVLLYQQLGV ASLIGALFLV LMFPIQTVII SKTQKLTKEG LQRTDKRIGL MNEILAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKAQL LSAFNMFILN SIPVLVTVVS FGVFSLLGGD LTPARAFTSL SLFSVLRFPL FMLPNIITQI VNANVSLKRL EEVLSTEERV
0601: LLPNPPIEPG QPAISIRNGC FSWDSKADRP TLSNINLDVP IGSLVAVVGS TGEGKTSLIS AMLGELPALS VATVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDQEKYE RVIDVTALRH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV CILDDPLSAL DAHVGQQVFE KCIKRELGNK TRVLVTNQLH
0801: FLSQVDKILL VHEGTVKEEG TYEELSHSGP LFQRLMENAG KVEEYSEANV EAEADQTSVK PVENGNTNNL QKDGKETKKS KEGTSVLVKR EERETGVVSW
0901: KVLKRYRDAL GGGWVVMMLL VCYVLTQVFR VSSSTWLSEW TDAGTPKSHG PLFYNIIYAV LSFGQVFVTL TNSYWLIMVS LYAAKKMHDA MLGSILRAPM
1001: VFFQTNPLGR IINRFAKDTG DIDRTVAVFV NMFMGSIAQL LSTVILIGIV STLSLWAIMP LLVAFYGAYL YYQNTSREIK RMDSVSRSPV YAQFGEALNG
1101: LSSIRAYKAY DRMAEINGKS MDNNIRFTLV NMGANRWLGI RLEFLGGLMV WLTASLAVMQ NGKAENQQAF ASTMGLLLSY ALSITSSLTA VLRLASLAEN
1201: SLNSVERVGN YIELPSEAPL VIENNRPPPG WPSSGSIKFE DVVLRYRPEL PPVLHGVSFF ISPMDKVGIV GRTGAGKSSL LNALFRIVEV EKGRILIDEC
1301: DIGKFGLMDL RKVLGIIPQA PVLFSGTVRF NLDPFGEHND ADLWESLERA HLKDTIRRNP LGLDAEVSEA GENFSVGQRQ LLSLARALLR RSKILVLDEA
1401: TAAVDVRTDV LIQKTIREEF KSCTMLIIAH RLNTIIDCDK VLVLDSGKVQ EFSTPENLLS NGESSFSKMV QSTGAANAEY LRSIVLENKR NRDANGDDSS
1501: QPLEGQRKWR ASSRWAAAAQ FALAVSLTSS HNDLQSLEIE DDNSVLKRTK DAVVTLRSVL EGKHDKEIEE SLTQNDLSRE RWWPSLYKMI EGLAVMSRLA
1601: KNRMQHPDYN LEGRSFDWDN VEM
0101: LDGAGFPPYE AFMLVLEAFA WGSALVMTVF ETKTYIHELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYGS FKLYIYISEV AVQVAFGTLL FVYFPNLDPY
0201: PGYTPLRTET SEDYEYEELP GGEQICPERH ASLFDRIFFS WLNPLMTLGS KRPLTEKDVW NLDTWDRTET LMRSFQRSWE KELEKPKPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNELLKSM QLNEPAWIGY IYAISIFVGV MFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RKKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIVA LVLLYQQLGV ASLIGALFLV LMFPIQTVII SKTQKLTKEG LQRTDKRIGL MNEILAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKAQL LSAFNMFILN SIPVLVTVVS FGVFSLLGGD LTPARAFTSL SLFSVLRFPL FMLPNIITQI VNANVSLKRL EEVLSTEERV
0601: LLPNPPIEPG QPAISIRNGC FSWDSKADRP TLSNINLDVP IGSLVAVVGS TGEGKTSLIS AMLGELPALS VATVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDQEKYE RVIDVTALRH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV CILDDPLSAL DAHVGQQVFE KCIKRELGNK TRVLVTNQLH
0801: FLSQVDKILL VHEGTVKEEG TYEELSHSGP LFQRLMENAG KVEEYSEANV EAEADQTSVK PVENGNTNNL QKDGKETKKS KEGTSVLVKR EERETGVVSW
0901: KVLKRYRDAL GGGWVVMMLL VCYVLTQVFR VSSSTWLSEW TDAGTPKSHG PLFYNIIYAV LSFGQVFVTL TNSYWLIMVS LYAAKKMHDA MLGSILRAPM
1001: VFFQTNPLGR IINRFAKDTG DIDRTVAVFV NMFMGSIAQL LSTVILIGIV STLSLWAIMP LLVAFYGAYL YYQNTSREIK RMDSVSRSPV YAQFGEALNG
1101: LSSIRAYKAY DRMAEINGKS MDNNIRFTLV NMGANRWLGI RLEFLGGLMV WLTASLAVMQ NGKAENQQAF ASTMGLLLSY ALSITSSLTA VLRLASLAEN
1201: SLNSVERVGN YIELPSEAPL VIENNRPPPG WPSSGSIKFE DVVLRYRPEL PPVLHGVSFF ISPMDKVGIV GRTGAGKSSL LNALFRIVEV EKGRILIDEC
1301: DIGKFGLMDL RKVLGIIPQA PVLFSGTVRF NLDPFGEHND ADLWESLERA HLKDTIRRNP LGLDAEVSEA GENFSVGQRQ LLSLARALLR RSKILVLDEA
1401: TAAVDVRTDV LIQKTIREEF KSCTMLIIAH RLNTIIDCDK VLVLDSGKVQ EFSTPENLLS NGESSFSKMV QSTGAANAEY LRSIVLENKR NRDANGDDSS
1501: QPLEGQRKWR ASSRWAAAAQ FALAVSLTSS HNDLQSLEIE DDNSVLKRTK DAVVTLRSVL EGKHDKEIEE SLTQNDLSRE RWWPSLYKMI EGLAVMSRLA
1601: KNRMQHPDYN LEGRSFDWDN VEM
0001: MGFEPLDWYC KPVPNGVWTK TVDYAFGAYT PCAIDSFVLG ISHLVLLILC LYRLWLITKD HKVDKFCLRS KWFSYFLALL AAYATAEPLF RLVMRISVLD
0101: LDGAGFPPYE AFMLVLEAFA WGSALVMTVV ETKTYIHELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYGS FKLYLYISEV AVQVAFGTLL FVYFPNLDPY
0201: PGYTPVGTEN SEDYEYEELP GGENICPERH ANLFDSIFFS WLNPLMTLGS KRPLTEKDVW HLDTWDKTET LMRSFQKSWD KELEKPKPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNELLKSM QLNEPAWIGY IYAISIFVGV VLGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RKKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIVA LVLLYQQLGV ASIIGALFLV LMFPIQTVII SKTQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKAQL LSAFNMFILN SIPVLVTVVS FGVFSLLGGD LTPARAFTSL SLFSVLRFPL FMLPNIITQM VNANVSLNRL EEVLSTEERV
0601: LLPNPPIEPG QPAISIRNGY FSWDSKADRP TLSNINLDIP LGSLVAVVGS TGEGKTSLIS AMLGELPARS DATVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GAPFDQEKYE RVIDVTALQH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV CILDDPLSAL DAHVGQQVFE KCIKRELGQT TRVLVTNQLH
0801: FLSQVDKILL VHEGTVKEEG TYEELCHSGP LFQRLMENAG KVEDYSEENG EAEVDQTSVK PVENGNANNL QKDGIETKNS KEGNSVLVKR EERETGVVSW
0901: KVLERYQNAL GGAWVVMMLV ICYVLTQVFR VSSSTWLSEW TDSGTPKTHG PLFYNIVYAL LSFGQVSVTL INSYWLIMSS LYAAKKMHDA MLGSILRAPM
1001: VFFQTNPLGR IINRFAKDMG DIDRTVAVFV NMFMGSIAQL LSTVILIGIV STLSLWAIMP LLVVFYGAYL YYQNTSREIK RMDSTTRSPV YAQFGEALNG
1101: LSSIRAYKAY DRMAEINGRS MDNNIRFTLV NMAANRWLGI RLEVLGGLMV WLTASLAVMQ NGKAANQQAY ASTMGLLLSY ALSITSSLTA VLRLASLAEN
1201: SLNSVERVGN YIEIPSEAPL VIENNRPPPG WPSSGSIKFE DVVLRYRPEL PPVLHGVSFL ISPMDKVGIV GRTGAGKSSL LNALFRIVEL EKGRILIDEC
1301: DIGRFGLMDL RKVLGIIPQA PVLFSGTVRF NLDPFSEHND ADLWESLERA HLKDTIRRNP LGLDAEVTEA GENFSVGQRQ LLSLARALLR RSKILVLDEA
1401: TAAVDVRTDV LIQKTIREEF KSCTMLIIAH RLNTIIDCDK VLVLDSGKVQ EFSSPENLLS NGESSFSKMV QSTGTANAEY LRSITLENKR TREANGDDSQ
1501: PLEGQRKWQA SSRWAAAAQF ALAVSLTSSH NDLQSLEIED DNSILKKTKD AVVTLRSVLE GKHDKEIEDS LNQSDISRER WWPSLYKMVE GLAVMSRLAR
1601: NRMQHPDYNL EGKSFDWDNV EM
0101: LDGAGFPPYE AFMLVLEAFA WGSALVMTVV ETKTYIHELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYGS FKLYLYISEV AVQVAFGTLL FVYFPNLDPY
0201: PGYTPVGTEN SEDYEYEELP GGENICPERH ANLFDSIFFS WLNPLMTLGS KRPLTEKDVW HLDTWDKTET LMRSFQKSWD KELEKPKPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNELLKSM QLNEPAWIGY IYAISIFVGV VLGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RKKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIVA LVLLYQQLGV ASIIGALFLV LMFPIQTVII SKTQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKAQL LSAFNMFILN SIPVLVTVVS FGVFSLLGGD LTPARAFTSL SLFSVLRFPL FMLPNIITQM VNANVSLNRL EEVLSTEERV
0601: LLPNPPIEPG QPAISIRNGY FSWDSKADRP TLSNINLDIP LGSLVAVVGS TGEGKTSLIS AMLGELPARS DATVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GAPFDQEKYE RVIDVTALQH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV CILDDPLSAL DAHVGQQVFE KCIKRELGQT TRVLVTNQLH
0801: FLSQVDKILL VHEGTVKEEG TYEELCHSGP LFQRLMENAG KVEDYSEENG EAEVDQTSVK PVENGNANNL QKDGIETKNS KEGNSVLVKR EERETGVVSW
0901: KVLERYQNAL GGAWVVMMLV ICYVLTQVFR VSSSTWLSEW TDSGTPKTHG PLFYNIVYAL LSFGQVSVTL INSYWLIMSS LYAAKKMHDA MLGSILRAPM
1001: VFFQTNPLGR IINRFAKDMG DIDRTVAVFV NMFMGSIAQL LSTVILIGIV STLSLWAIMP LLVVFYGAYL YYQNTSREIK RMDSTTRSPV YAQFGEALNG
1101: LSSIRAYKAY DRMAEINGRS MDNNIRFTLV NMAANRWLGI RLEVLGGLMV WLTASLAVMQ NGKAANQQAY ASTMGLLLSY ALSITSSLTA VLRLASLAEN
1201: SLNSVERVGN YIEIPSEAPL VIENNRPPPG WPSSGSIKFE DVVLRYRPEL PPVLHGVSFL ISPMDKVGIV GRTGAGKSSL LNALFRIVEL EKGRILIDEC
1301: DIGRFGLMDL RKVLGIIPQA PVLFSGTVRF NLDPFSEHND ADLWESLERA HLKDTIRRNP LGLDAEVTEA GENFSVGQRQ LLSLARALLR RSKILVLDEA
1401: TAAVDVRTDV LIQKTIREEF KSCTMLIIAH RLNTIIDCDK VLVLDSGKVQ EFSSPENLLS NGESSFSKMV QSTGTANAEY LRSITLENKR TREANGDDSQ
1501: PLEGQRKWQA SSRWAAAAQF ALAVSLTSSH NDLQSLEIED DNSILKKTKD AVVTLRSVLE GKHDKEIEDS LNQSDISRER WWPSLYKMVE GLAVMSRLAR
1601: NRMQHPDYNL EGKSFDWDNV EM
Arabidopsis Description
ABCC1ABC transporter C family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8G9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.