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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43395 Canola plasma membrane 93.26 78.36
CDX82557 Canola plasma membrane 30.38 74.5
CDY71198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 30.14 73.32
CDY51899 Canola endoplasmic reticulum, plasma membrane, vacuole 32.17 72.79
Zm00001d048327_P001 Maize cytosol 2.27 68.29
AT3G13100.1 Thale cress plasma membrane 78.88 65.04
TraesCS1A01G310100.1 Wheat cytosol 37.21 60.74
CDX82552 Canola plasma membrane 57.68 57.68
KRH73882 Soybean plasma membrane 56.3 53.64
PGSC0003DMT400057099 Potato endoplasmic reticulum, plasma membrane 55.56 51.82
CDY44021 Canola plastid 72.95 51.82
KXG31741 Sorghum plasma membrane 52.56 51.64
CDY23565 Canola plastid 72.79 51.58
KRG99624 Soybean plasma membrane 61.01 50.47
KRH46626 Soybean plasma membrane 59.63 50.24
KRH14256 Soybean plasma membrane 60.84 50.13
KRH73881 Soybean plasma membrane 60.6 49.97
CDY39771 Canola endoplasmic reticulum, plasma membrane, vacuole 43.22 49.72
KRH01233 Soybean cytosol, endoplasmic reticulum, plasma membrane 52.72 49.69
KRG98556 Soybean nucleus 52.15 49.35
OQU92792 Sorghum plasma membrane 54.51 48.94
KRH46325 Soybean plasma membrane 59.38 48.86
KRH46324 Soybean plasma membrane 59.3 48.57
GSMUA_Achr10P... Banana plasma membrane 50.45 48.44
TraesCS1D01G309600.1 Wheat peroxisome 50.04 47.98
VIT_19s0015g00040.t01 Wine grape plasma membrane 41.92 47.87
TraesCS1B01G321200.1 Wheat peroxisome 49.88 47.82
HORVU3Hr1G024210.3 Barley vacuole 54.91 47.47
Os02t0288400-00 Rice plasma membrane 49.55 47.43
TraesCS2D01G420400.1 Wheat plasma membrane 49.39 47.39
Zm00001d008733_P001 Maize plasma membrane 57.03 46.86
Zm00001d020666_P004 Maize plasma membrane 50.12 46.85
TraesCS2B01G442400.1 Wheat plasma membrane 47.68 46.51
TraesCS4A01G051100.1 Wheat plasma membrane 55.89 46.24
TraesCS4D01G253300.3 Wheat plasma membrane 55.65 46.16
TraesCS4B01G253200.1 Wheat plasma membrane 55.48 46.09
TraesCS3B01G148100.2 Wheat plasma membrane, plastid 56.13 46.07
TraesCS3A01G129000.1 Wheat plastid 55.97 46.06
TraesCS3B01G395000.2 Wheat plasma membrane 54.83 45.98
TraesCS3D01G129900.2 Wheat plasma membrane 55.89 45.96
Os01t0173900-01 Rice plasma membrane 56.05 45.85
HORVU3Hr1G085890.7 Barley plasma membrane 54.67 45.81
TraesCS3D01G356300.2 Wheat plasma membrane 54.67 45.75
KXG40096 Sorghum plasma membrane 56.05 45.67
Zm00001d048329_P003 Maize plasma membrane 55.32 44.83
TraesCS3A01G362500.1 Wheat plasma membrane 51.75 44.21
CDX98408 Canola plasma membrane 46.79 43.87
CDY64080 Canola plasma membrane 46.63 43.78
KRH73880 Soybean plasma membrane 43.3 43.44
CDX89842 Canola plasma membrane 48.82 39.85
CDY18207 Canola plasma membrane 48.74 39.76
CDY03309 Canola golgi 45.41 38.95
CDX71911 Canola plasma membrane 35.17 37.33
CDY06021 Canola plasma membrane 35.17 37.2
CDY23680 Canola plasma membrane 38.42 35.27
CDY72149 Canola cytosol, peroxisome, plasma membrane 16.98 34.15
CDY27531 Canola plasma membrane 39.24 34.01
CDY37305 Canola plasma membrane 39.07 33.87
CDX76656 Canola plasma membrane, plastid 40.13 33.4
CDY11440 Canola plastid 40.13 33.27
CDY43277 Canola plastid 40.37 33.18
CDY06441 Canola plasma membrane 39.24 32.97
CDX93660 Canola plastid 40.13 32.54
CDY09589 Canola plasma membrane 32.01 26.39
CDX98202 Canola plasma membrane 31.28 26.39
CDY12054 Canola plasma membrane 34.12 25.88
CDY31633 Canola plasma membrane 34.12 25.83
CDY09591 Canola plasma membrane 34.04 25.8
CDX84290 Canola plasma membrane 34.04 25.72
CDY02289 Canola plasma membrane 33.87 25.69
CDY01519 Canola plasma membrane 29.73 25.58
CDX90247 Canola plasma membrane 33.63 25.49
CDY02290 Canola plasma membrane 32.25 24.58
CDX77595 Canola extracellular 1.79 10.95
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300GO:A0A078JFM5UniProt:A0A078JFM5InterPro:AAA+_ATPase
InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY63884ProteinID:CDY63884
ProteinID:CDY63884.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00039707001InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF181SMART:SM00382SUPFAM:SSF52540
SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0004EF3D80SEG:seg::
Description
BnaCnng42820DBnaCnng42820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFM5]
Coordinates
chrLK034363:-:18106..23377
Molecular Weight (calculated)
137137.0 Da
IEP (calculated)
5.091
GRAVY (calculated)
0.184
Length
1231 amino acids
Sequence
(BLAST)
0001: MENPLDFLLI QPIYLPLLSF FLNMVLLLIL FVSWVYNKKV ACENSDDFMA KRSTNMSSTF SKLVVMCCVS LSVFYSVLSL LSCVRWHSNV WTLFDLLLAA
0101: LTWGTISMYL RGLYIDSHEQ KLPYLLRVWW VFYFLISCYR LVVDFALYKK QELVSVHNVV SDLVGVCAGL LLCCSCLWKK GEEGETTTLL EEPFLSENEG
0201: CDDEVTTHFS KAGFLSLVSF SWMSPLVTLG NEKIIDSNDV PQVDSSDRAE NLFRVFRSQL EWDDEAGWLK KFVYNSAAMS SVLLTAPSFI SATAFGACVL
0301: LKIPLESGKI LAALAIFQIL QSPIYKLPET ISMFVQVKVS LGRIASFLCL DDLEKDVVER LTYSEMALEV SNGCFSWDNS SSIPTLREVS FEVSHGMNVA
0401: VCGTVGSGKS SLLSSILGEV PKISGTVKVF GSKAYVAQSP WIQSGKVEDN ILFGKPMERE WYQSVLEACC LNKDLELLPF HDQTVIGERG INLSGGQKQR
0501: IQIARALYQD ADIYLFDDPF SAVDAHTGSH LFKEVILGVL KDKTVIYVTH QVEFLPEADL ILVMKDGKIT QAGRYNEILD SGTDFMELVG AHTDALATVD
0601: TYEQGCASSE STTNKEDKEA PKLEKDSGNK PRGQLVQQEE REKGKVGFTV YKKYMALAYG GAVIPIILLV QILFQVLDIG SNYWMTWVTP VSKDVEPPVS
0701: GFTLILVYVV LAIASSLCIL VRTLLVSMTG FKMATELFTQ MHLRVFRASM SFFDVTPMGR ILNRASTDQS VVDLRLPGQF AYAAVAAINI LGIMGVMIQV
0801: AWLVLIIFIP VVAASSWYRQ YYISAARELA RLAGISRSPL VHHFSETLSG VTTIRSFDQE PRFLSDIMKL SDCLSRLTFH STGATEWLCF RLELLSTITF
0901: ALSLVIVVST PEGTVNPSFA GLAITYALNL NNLQSNLVWT LCELENKMIS VERMLQYIDI PSEPSLVIES TRPEKSWPSR GEITISNLQV RYGPHLPMVL
1001: HGLTCTFPGG LKTGIVGRTG CGKSTLIQTL FRIVEPTAGE IRIDGIDILT IGLHDLRSRL SIIPQDPTMF EGTVRSNLDP LEEYSDDQIW EALDKCQLGD
1101: EVRKKELKLD SSVSENGQNW SVGQRQLVCL GRVLLKRSKV LVLDEATASV DTATDNLIQE TLRQHFRDCT VITIAHRISS VIDSDMVLLL DQGLIKEHDS
1201: PGRLLEDKSS SFSKLVAEYT TSSESKFSRS C
Best Arabidopsis Sequence Match ( AT3G13080.1 )
(BLAST)
0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQRYYIA AARELSRLVG VCKAPLIQHF SETISGATTI RSFSQEFRFR SDNMRLSDGY SRPKFYTAGA MEWLCFRLDM LSSLTFVFSL VFLVSIPTGV
1201: IDPSLAGLAV TYGLSLNTLQ AWLIWTLCNL ENKIISVERI LQYASVPSEP PLVIESNRPE QSWPSRGEVE IRDLQVRYAP HMPLVLRGIT CTFKGGLRTG
1301: IVGRTGSGKS TLIQTLFRIV EPSAGEIRID GVNILTIGLH DLRLRLSIIP QDPTMFEGTM RSNLDPLEEY TDDQIWEALD KCQLGDEVRK KEQKLDSSVS
1401: ENGDNWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS DMVLLLSNGI IEEYDTPVRL LEDKSSSFSK
1501: LVAEYTSRSS SSFD
Arabidopsis Description
ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.