Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G253300.3 | Wheat | plasma membrane | 97.45 | 97.71 |
| TraesCS4B01G253200.1 | Wheat | plasma membrane | 96.71 | 97.1 |
| TraesCS3A01G129000.1 | Wheat | plastid | 92.27 | 91.78 |
| KXG31741 | Sorghum | plasma membrane | 72.11 | 85.63 |
| Zm00001d048327_P001 | Maize | cytosol | 2.28 | 82.93 |
| Os01t0173900-01 | Rice | plasma membrane | 82.39 | 81.46 |
| OQU92792 | Sorghum | plasma membrane | 74.26 | 80.6 |
| Zm00001d008733_P001 | Maize | plasma membrane | 80.17 | 79.64 |
| TraesCS3A01G362500.1 | Wheat | plasma membrane | 73.59 | 75.99 |
| KXG40096 | Sorghum | plasma membrane | 76.21 | 75.05 |
| Zm00001d048329_P003 | Maize | plasma membrane | 74.33 | 72.81 |
| CDY71198 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 24.4 | 71.74 |
| CDX82557 | Canola | plasma membrane | 24.19 | 71.71 |
| CDY51899 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.08 | 71.32 |
| CDX82552 | Canola | plasma membrane | 57.26 | 69.21 |
| KRH73882 | Soybean | plasma membrane | 58.13 | 66.95 |
| TraesCS1A01G310100.1 | Wheat | cytosol | 33.2 | 65.52 |
| PGSC0003DMT400057099 | Potato | endoplasmic reticulum, plasma membrane | 57.73 | 65.08 |
| GSMUA_Achr10P... | Banana | plasma membrane | 56.05 | 65.05 |
| VIT_19s0015g00040.t01 | Wine grape | plasma membrane | 45.63 | 62.99 |
| KRG98556 | Soybean | nucleus | 54.17 | 61.95 |
| KRG99624 | Soybean | plasma membrane | 61.9 | 61.9 |
| Bra001490.1-P | Field mustard | plasma membrane | 61.49 | 61.87 |
| AT3G13080.1 | Thale cress | plasma membrane, plastid | 62.5 | 61.43 |
| KRH46626 | Soybean | plasma membrane | 60.22 | 61.33 |
| Bra001488.1-P | Field mustard | plasma membrane, plastid | 61.49 | 61.29 |
| KRH14256 | Soybean | plasma membrane | 61.29 | 61.04 |
| KRH73881 | Soybean | plasma membrane | 61.02 | 60.82 |
| Bra039368.1-P | Field mustard | plasma membrane | 59.95 | 60.39 |
| KRH01233 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 52.02 | 59.26 |
| KRH46325 | Soybean | plasma membrane | 58.87 | 58.56 |
| KRH46324 | Soybean | plasma membrane | 58.74 | 58.15 |
| KRH73880 | Soybean | plasma membrane | 47.38 | 57.46 |
| Bra034706.1-P | Field mustard | plasma membrane | 55.44 | 56.01 |
| CDY63884 | Canola | plasma membrane | 46.24 | 55.89 |
| AT3G13100.1 | Thale cress | plasma membrane | 55.98 | 55.79 |
| CDY43395 | Canola | plasma membrane | 54.77 | 55.63 |
| Bra039348.1-P | Field mustard | plasma membrane | 54.23 | 55.16 |
| TraesCS5A01G512500.2 | Wheat | endoplasmic reticulum, plasma membrane | 47.72 | 49.27 |
| TraesCS7A01G119800.1 | Wheat | plasma membrane | 27.15 | 47.14 |
| CDY44021 | Canola | plastid | 52.55 | 45.12 |
| CDY23565 | Canola | plastid | 52.42 | 44.91 |
| TraesCS2A01G056800.1 | Wheat | plasma membrane | 29.91 | 44.86 |
| TraesCS2A01G451500.1 | Wheat | plasma membrane | 46.17 | 44.7 |
| TraesCS2A01G451300.1 | Wheat | plastid | 46.77 | 43.88 |
| TraesCS3A01G393500.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.15 | 43.5 |
| TraesCS7A01G119500.1 | Wheat | cytosol, peroxisome, plasma membrane | 35.89 | 42.05 |
| TraesCS4A01G227600.1 | Wheat | cytosol, golgi, mitochondrion, plasma membrane | 32.66 | 41.72 |
| TraesCS3A01G123000.1 | Wheat | plasma membrane | 38.84 | 39.7 |
| TraesCS7A01G358100.1 | Wheat | plasma membrane | 39.18 | 39.61 |
| TraesCS5A01G467600.1 | Wheat | plasma membrane | 39.52 | 39.07 |
| TraesCS7A01G118900.2 | Wheat | plasma membrane | 38.84 | 39.03 |
| TraesCS2A01G056900.1 | Wheat | plasma membrane, plastid | 38.58 | 38.6 |
| TraesCS2A01G057100.1 | Wheat | plasma membrane | 38.44 | 38.08 |
| TraesCS2A01G128500.1 | Wheat | plasma membrane | 38.04 | 37.86 |
| TraesCS7A01G119000.1 | Wheat | plasma membrane | 36.96 | 36.69 |
| TraesCS1A01G404300.1 | Wheat | plasma membrane | 29.37 | 27.19 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF181 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4A01G051100 | EnsemblPlants:TraesCS4A01G051100.1 | TIGR:cd03244 | TIGR:cd03250 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:41968227..41974950
Molecular Weight (calculated)
162809.0 Da
IEP (calculated)
6.447
GRAVY (calculated)
0.225
Length
1488 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPIAAAMAGQ KQPALPLVLR PLLLHGVGAG AHLLLALAVA ARLLFASGRR GKDTAAPAPG RGSGIRFRWG QVAVRATWAL AASELFLAAY SVVSWYLDNS
0101: GGGGAEVTDA AARAVAWLLL AAYLQLEYRG RGEERFPAPL RLWWALFLLL SVLAVAVHAA TSLCYGLPVP ALPWARDAVE VIAAVALLVA GFSAKRAATT
0201: TGGSASEEPL LNGASDDDTV DASLFTSAGF LSVLTFSWMS PLFAVGHRKT LGLDDVPDLD HGDSVAGLLP SFKTNLEALA GDGSGSGPKF TAFKLTRALV
0301: RTVWWHIAVT ALYALIYNLA TYVGPYLIDS LVQYLNGDER YAGKGKLLVV TFIVAKVFEC LSQRHWFFRL QQAGIRTRSA LVSVVYQKGL SLSSSSRQSC
0401: TSGEMINIIS VDADRVGLFS WYMHDPWLVP LQVGLALFIL YSTLGVASLA ALGATIAVML ANVPPMKMQE KFQQKLMDCK DVRMKVTSEI LRNMRILKLQ
0501: GWEMKFLSKI NDLRTTETSW LKKYLYTWTA ATFVFWGAPT FVAVATFGAC MLLGIPLESG KVLSALATFR VLQEPIYNLP DTISMMIQTK VSLDRIASFL
0601: CLEEFPTDAV ERLPSGSSNV AIEVSNGCFS WDGSPELPTL KDLNFQARQG MHVAVCGTVG SGKSSLLSCI LGEVPKLSGE VKTCGTMAYV SQTAWIQSGK
0701: IQDNILFGKE MDSEKYDSVL EWCSLKKDLE ILPFGDKTVI GERGINLSGG QKQRIQIARA LYQDADIYLF DDPFSAVDAH TGSHLFKECL LGALASKTVV
0801: YVTHQIEFLP AADLILVMKG GRIAQAGKYN DILGSGEELM ELVGAHQHAL TALDVIDVAN GSSEKLSSSL SRSLSSAEEK DKQNGKEDGD KVQSGQLVQE
0901: EEREKGRVGF WVYWKYLTLA YGGALVPFVL ITQLLFQVLQ IASNYWMAWA SPVSEDAEPP VSTSTLIYVF VALAVASSLC ILVRALFVVT AAYKTATLLF
1001: NKMHMAIFRA PMSFFDSTPS GRILNRASTD QSEVDTYIAN QMGYVAFSII QLAGIIVVMS QVAWQVFVVF VPVIIIFLCY QRYYIETARE LQRLVGVCKA
1101: PIIQHFSESI SGSTTIRSFG KENQFVLTNS HLIDADSRPK FYNAAAMEWL CFRLDTLSSF TFAFALIFLI SLPTGIIDPG IAGLAVTYGL NLNMLQAWVV
1201: RSMCNLENKI VSVERILQYI SIPEEPPLST SGDKLPHNWP SEGEIQLRNL HVRYAPQLAF VLKGLSVTFP GGMKTGIVGR TGSGKSTLIQ VLFRIVEPTV
1301: GQILVDGVDI CTIGLHDLRS RLSIIPQDPT MFEGTVRSNL DPLNEYNDDQ IWEALDNCQL GDEVRKKELK LDSPVIENGE NWSVGQRQLV CLGRVILKRT
1401: KILVLDEATA SVDTATDNMI QRTLRENFSE ATVITIAHRI TSVLDSDMVL LLDDGVAVER DTPAKLLEDK SSLFSKLVAE YTMRATHT
0101: GGGGAEVTDA AARAVAWLLL AAYLQLEYRG RGEERFPAPL RLWWALFLLL SVLAVAVHAA TSLCYGLPVP ALPWARDAVE VIAAVALLVA GFSAKRAATT
0201: TGGSASEEPL LNGASDDDTV DASLFTSAGF LSVLTFSWMS PLFAVGHRKT LGLDDVPDLD HGDSVAGLLP SFKTNLEALA GDGSGSGPKF TAFKLTRALV
0301: RTVWWHIAVT ALYALIYNLA TYVGPYLIDS LVQYLNGDER YAGKGKLLVV TFIVAKVFEC LSQRHWFFRL QQAGIRTRSA LVSVVYQKGL SLSSSSRQSC
0401: TSGEMINIIS VDADRVGLFS WYMHDPWLVP LQVGLALFIL YSTLGVASLA ALGATIAVML ANVPPMKMQE KFQQKLMDCK DVRMKVTSEI LRNMRILKLQ
0501: GWEMKFLSKI NDLRTTETSW LKKYLYTWTA ATFVFWGAPT FVAVATFGAC MLLGIPLESG KVLSALATFR VLQEPIYNLP DTISMMIQTK VSLDRIASFL
0601: CLEEFPTDAV ERLPSGSSNV AIEVSNGCFS WDGSPELPTL KDLNFQARQG MHVAVCGTVG SGKSSLLSCI LGEVPKLSGE VKTCGTMAYV SQTAWIQSGK
0701: IQDNILFGKE MDSEKYDSVL EWCSLKKDLE ILPFGDKTVI GERGINLSGG QKQRIQIARA LYQDADIYLF DDPFSAVDAH TGSHLFKECL LGALASKTVV
0801: YVTHQIEFLP AADLILVMKG GRIAQAGKYN DILGSGEELM ELVGAHQHAL TALDVIDVAN GSSEKLSSSL SRSLSSAEEK DKQNGKEDGD KVQSGQLVQE
0901: EEREKGRVGF WVYWKYLTLA YGGALVPFVL ITQLLFQVLQ IASNYWMAWA SPVSEDAEPP VSTSTLIYVF VALAVASSLC ILVRALFVVT AAYKTATLLF
1001: NKMHMAIFRA PMSFFDSTPS GRILNRASTD QSEVDTYIAN QMGYVAFSII QLAGIIVVMS QVAWQVFVVF VPVIIIFLCY QRYYIETARE LQRLVGVCKA
1101: PIIQHFSESI SGSTTIRSFG KENQFVLTNS HLIDADSRPK FYNAAAMEWL CFRLDTLSSF TFAFALIFLI SLPTGIIDPG IAGLAVTYGL NLNMLQAWVV
1201: RSMCNLENKI VSVERILQYI SIPEEPPLST SGDKLPHNWP SEGEIQLRNL HVRYAPQLAF VLKGLSVTFP GGMKTGIVGR TGSGKSTLIQ VLFRIVEPTV
1301: GQILVDGVDI CTIGLHDLRS RLSIIPQDPT MFEGTVRSNL DPLNEYNDDQ IWEALDNCQL GDEVRKKELK LDSPVIENGE NWSVGQRQLV CLGRVILKRT
1401: KILVLDEATA SVDTATDNMI QRTLRENFSE ATVITIAHRI TSVLDSDMVL LLDDGVAVER DTPAKLLEDK SSLFSKLVAE YTMRATHT
0001: MENPIDSLLL QPIYLSVLSF FLNLVLLLIL FGSWLFKKRV ACEDTDAIMN EEFKHISFSY NKLVLICCVS LSVFYSVLSL LSCLHWHTNG WPFLDLLLAA
0101: LTWGSISVYL FGRYTNSCEQ KVLFLLRVWW VFFFVVSCYH LVVDFVLYKK QEMVSVHFVI SDLVGVCAGL FLCCSCLWKK GEGERIDLLK EPLLSSAESS
0201: DNEEVTAPFS KAGILSRMSF SWMSPLITLG NEKIIDIKDV PQLDRSDTTE SLFWIFRSKL EWDDGERRIT TFKLIKALFL SVWRDIVLSA LLAFVYTVSC
0301: YVAPYLMDNF VQYLNGNRQY KNQGYVLVTT FFVAKLVECQ TQRQWFFRGQ KAGLGMRSVL VSMIYEKGLT LPCHSKQGHT SGEIINLMAV DADRISAFSW
0401: FMHDPWILVL QVSLALWILY KSLGLGSIAA FPATILVMLA NYPFAKLEEK FQSSLMKSKD NRMKKTSEVL LNMKILKLQG WEMKFLSKIL ELRHIEAGWL
0501: KKFVYNSSAI NSVLWAAPSF ISATAFGACL LLKIPLESGK ILAALATFRI LQGPIYKLPE TISMIVQTKV SLNRIASFLC LDDLQQDVVG RLPSGSSEMA
0601: VEISNGTFSW DDSSPIPTLR DMNFKVSQGM NVAICGTVGS GKSSLLSSIL GEVPKISGNL KVCGRKAYIA QSPWIQSGKV EENILFGKPM EREWYDRVLE
0701: ACSLNKDLEI LPFHDQTVIG ERGINLSGGQ KQRIQIARAL YQDADIYLFD DPFSAVDAHT GSHLFKEVLL GLLRHKTVIY VTHQVEFLPE ADLILVMKDG
0801: KITQAGKYHE ILDSGTDFME LVGAHTEALA TIDSCETGYA SEKSTTDKEN EVLHHKEKQE NGSDNKPSGQ LVQEEEREKG KVGFTVYKKY MALAYGGAVI
0901: PLILVVQVLF QLLSIGSNYW MTWVTPVSKD VEPPVSGFTL ILVYVLLAVA SSFCILIRAL LVAMTGFKMA TELFTQMHLR IFRASMSFFD ATPMGRILNR
1001: ASTDQSVADL RLPGQFAYVA IAAINILGII GVIVQVAWQV LIVFIPVVAA CAWYRQYYIS AARELARLAG ISRSPVVHHF SETLSGITTI RSFDQEPRFR
1101: GDIMRLSDCY SRLKFHSTGA MEWLCFRLEL LSTFAFASSL VILVSAPEGV INPSLAGLAI TYALNLNTLQ ATLIWTLCDL ENKMISVERM LQYTNIPSEP
1201: PLVIETTRPE KSWPSRGEIT ICNLQVRYGP HLPMVLHGLT CTFPGGLKTG IVGRTGCGKS TLIQTLFRIV EPAAGEIRID GINILSIGLH DLRSRLSIIP
1301: QDPTMFEGTI RSNLDPLEEY TDDQIWEALD NCQLGDEVRK KELKLDSPVS ENGQNWSVGQ RQLVCLGRVL LKRSKLLVLD EATASIDTAT DNLIQETLRH
1401: HFADCTVITI AHRISSVIDS DMVLLLDQGL IKEHDSPARL LEDRSSLFSK LVAEYTTSSE SKSKRS
0101: LTWGSISVYL FGRYTNSCEQ KVLFLLRVWW VFFFVVSCYH LVVDFVLYKK QEMVSVHFVI SDLVGVCAGL FLCCSCLWKK GEGERIDLLK EPLLSSAESS
0201: DNEEVTAPFS KAGILSRMSF SWMSPLITLG NEKIIDIKDV PQLDRSDTTE SLFWIFRSKL EWDDGERRIT TFKLIKALFL SVWRDIVLSA LLAFVYTVSC
0301: YVAPYLMDNF VQYLNGNRQY KNQGYVLVTT FFVAKLVECQ TQRQWFFRGQ KAGLGMRSVL VSMIYEKGLT LPCHSKQGHT SGEIINLMAV DADRISAFSW
0401: FMHDPWILVL QVSLALWILY KSLGLGSIAA FPATILVMLA NYPFAKLEEK FQSSLMKSKD NRMKKTSEVL LNMKILKLQG WEMKFLSKIL ELRHIEAGWL
0501: KKFVYNSSAI NSVLWAAPSF ISATAFGACL LLKIPLESGK ILAALATFRI LQGPIYKLPE TISMIVQTKV SLNRIASFLC LDDLQQDVVG RLPSGSSEMA
0601: VEISNGTFSW DDSSPIPTLR DMNFKVSQGM NVAICGTVGS GKSSLLSSIL GEVPKISGNL KVCGRKAYIA QSPWIQSGKV EENILFGKPM EREWYDRVLE
0701: ACSLNKDLEI LPFHDQTVIG ERGINLSGGQ KQRIQIARAL YQDADIYLFD DPFSAVDAHT GSHLFKEVLL GLLRHKTVIY VTHQVEFLPE ADLILVMKDG
0801: KITQAGKYHE ILDSGTDFME LVGAHTEALA TIDSCETGYA SEKSTTDKEN EVLHHKEKQE NGSDNKPSGQ LVQEEEREKG KVGFTVYKKY MALAYGGAVI
0901: PLILVVQVLF QLLSIGSNYW MTWVTPVSKD VEPPVSGFTL ILVYVLLAVA SSFCILIRAL LVAMTGFKMA TELFTQMHLR IFRASMSFFD ATPMGRILNR
1001: ASTDQSVADL RLPGQFAYVA IAAINILGII GVIVQVAWQV LIVFIPVVAA CAWYRQYYIS AARELARLAG ISRSPVVHHF SETLSGITTI RSFDQEPRFR
1101: GDIMRLSDCY SRLKFHSTGA MEWLCFRLEL LSTFAFASSL VILVSAPEGV INPSLAGLAI TYALNLNTLQ ATLIWTLCDL ENKMISVERM LQYTNIPSEP
1201: PLVIETTRPE KSWPSRGEIT ICNLQVRYGP HLPMVLHGLT CTFPGGLKTG IVGRTGCGKS TLIQTLFRIV EPAAGEIRID GINILSIGLH DLRSRLSIIP
1301: QDPTMFEGTI RSNLDPLEEY TDDQIWEALD NCQLGDEVRK KELKLDSPVS ENGQNWSVGQ RQLVCLGRVL LKRSKLLVLD EATASIDTAT DNLIQETLRH
1401: HFADCTVITI AHRISSVIDS DMVLLLDQGL IKEHDSPARL LEDRSSLFSK LVAEYTTSSE SKSKRS
Arabidopsis Description
ABCC6ABC transporter C family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZZ4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.