CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44021	Canola	plastid	95.91	96.13
CDX82557	Canola	plasma membrane	22.28	77.09
CDY71198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	21.65	74.31
CDY63884	Canola	plasma membrane	51.58	72.79
CDY43395	Canola	plasma membrane	60.91	72.22
CDY51899	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.16	70.77
Zm00001d048327_P001	Maize	cytosol	1.67	70.73
CDX82552	Canola	plasma membrane	49.17	69.37
KRH73882	Soybean	plasma membrane	46.8	62.93
PGSC0003DMT400057099	Potato	endoplasmic reticulum, plasma membrane	47.73	62.8
VIT_19s0015g00040.t01	Wine grape	plasma membrane	38.28	61.69
KXG31741	Sorghum	plasma membrane	43.47	60.26
TraesCS1A01G310100.1	Wheat	cytosol	25.79	59.42
KRG98556	Soybean	nucleus	44.21	59.03
KRH01233	Soybean	cytosol, endoplasmic reticulum, plasma membrane	43.98	58.5
KRH46626	Soybean	plasma membrane	48.88	58.11
KRG99624	Soybean	plasma membrane	49.74	58.06
KRH14256	Soybean	plasma membrane	49.45	57.5
KRH73881	Soybean	plasma membrane	49.28	57.33
KRH46325	Soybean	plasma membrane	48.7	56.55
KRH46324	Soybean	plasma membrane	48.47	56.02
OQU92792	Sorghum	plasma membrane	44.1	55.87
GSMUA_Achr10P...	Banana	plasma membrane	40.88	55.38
TraesCS1D01G309600.1	Wheat	peroxisome	40.59	54.91
HORVU3Hr1G024210.3	Barley	vacuole	44.85	54.71
TraesCS1B01G321200.1	Wheat	peroxisome	40.41	54.67
Os02t0288400-00	Rice	plasma membrane	40.3	54.43
TraesCS2D01G420400.1	Wheat	plasma membrane	39.84	53.94
Zm00001d020666_P004	Maize	plasma membrane	40.82	53.83
Zm00001d008733_P001	Maize	plasma membrane	46.0	53.34
CDY39771	Canola	endoplasmic reticulum, plasma membrane, vacuole	32.76	53.18
TraesCS2B01G442400.1	Wheat	plasma membrane	38.63	53.17
TraesCS3A01G129000.1	Wheat	plastid	45.71	53.07
Os01t0173900-01	Rice	plasma membrane	45.88	52.96
TraesCS3B01G148100.2	Wheat	plasma membrane, plastid	45.54	52.73
KRH73880	Soybean	plasma membrane	37.25	52.73
TraesCS3D01G129900.2	Wheat	plasma membrane	45.42	52.71
TraesCS4D01G253300.3	Wheat	plasma membrane	44.91	52.56
TraesCS4B01G253200.1	Wheat	plasma membrane	44.79	52.5
TraesCS4A01G051100.1	Wheat	plasma membrane	44.91	52.42
TraesCS3D01G356300.2	Wheat	plasma membrane	44.33	52.35
HORVU3Hr1G085890.7	Barley	plasma membrane	44.16	52.21
TraesCS3B01G395000.2	Wheat	plasma membrane	43.7	51.7
KXG40096	Sorghum	plasma membrane	44.44	51.09
TraesCS3A01G362500.1	Wheat	plasma membrane	42.14	50.8
Zm00001d048329_P003	Maize	plasma membrane	44.04	50.36
CDY64080	Canola	plasma membrane	35.06	46.45
CDX98408	Canola	plasma membrane	34.89	46.15
CDX89842	Canola	plasma membrane	38.98	44.89
CDY03309	Canola	golgi	37.02	44.81
CDY18207	Canola	plasma membrane	38.92	44.8
CDX71911	Canola	plasma membrane	28.04	41.98
CDY06021	Canola	plasma membrane	28.04	41.84
CDY23680	Canola	plasma membrane	29.53	38.26
CDY27531	Canola	plasma membrane	30.63	37.46
CDY37305	Canola	plasma membrane	30.34	37.11
CDX76656	Canola	plasma membrane, plastid	31.26	36.71
CDY11440	Canola	plastid	31.09	36.36
CDY43277	Canola	plastid	31.09	36.05
CDY06441	Canola	plasma membrane	30.4	36.04
CDX93660	Canola	plastid	31.2	35.7
CDY72149	Canola	cytosol, peroxisome, plasma membrane	11.17	31.7
CDY01519	Canola	plasma membrane	23.78	28.86
CDY09589	Canola	plasma membrane	24.41	28.4
CDX98202	Canola	plasma membrane	23.78	28.31
CDY12054	Canola	plasma membrane	25.73	27.54
CDX84290	Canola	plasma membrane	25.79	27.5
CDY31633	Canola	plasma membrane	25.73	27.49
CDY02289	Canola	plasma membrane	25.62	27.42
CDY09591	Canola	plasma membrane	25.62	27.4
CDX90247	Canola	plasma membrane	25.5	27.28
CDY02290	Canola	plasma membrane	24.52	26.38
CDX77595	Canola	extracellular	0.86	7.46

Protein Annotations

KEGG:00270+2.3.1.30	KEGG:00920+2.3.1.30	Gene3D:1.10.3130.10	Gene3D:1.20.1560.10	Gene3D:2.160.10.10	MapMan:24.1.3.1.2
Gene3D:3.40.50.300	MapMan:4.1.4.2.1	GO:A0A078GAX4	UniProt:A0A078GAX4	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY23565	ProteinID:CDY23565	ProteinID:CDY23565.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009001	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00023757001	InterPro:Hexapep	InterPro:Hexapep_transf_CS	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00132	PFAM:PF00664	PFAM:PF06426	ScanProsite:PS00101
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24223	PANTHER:PTHR24223:SF181	MetaCyc:PWY-6936
MetaCyc:PWY-7274	SMART:SM00382	SMART:SM00971	SUPFAM:SSF51161	SUPFAM:SSF52540	SUPFAM:SSF90123
InterPro:Ser_AcTrfase_N	InterPro:Ser_O-AcTrfase	TIGRFAMs:TIGR01172	TMHMM:TMhelix	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00136
UniParc:UPI0004EF3DCE	SEG:seg	:	:	:	:

Description

BnaC05g40290DBnaC05g40290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAX4]

Coordinates

chrLK032145:-:78704..86532

Molecular Weight (calculated)

193380.0 Da

IEP (calculated)

7.125

GRAVY (calculated)

-0.018

Length

1737 amino acids

Sequence
(BLAST)

0001: MFPVTSRRHF TSSLYMLRSS SPHNHVLYSP SSFLPSFISS KSKSKSKSSS STNKHNQQSP PPMAACIDTC RTGKPQISRD SNRSHDDESG FRYSNYYRPS
0101: GYHPTTQTKT IHTRPLVEDL PNDDVWAKIR QEARSDIERE PIVSGYYQAS IVSQRSLEAA LANTLSVKLS NLNLPSNTLF DLFNGVLEQH PEIVESVKQD
0201: LLAVKERDPA CISYVHCFLH FKGFLACQAH RIAHELWTQN RKVLALLIQN RVSEAFAVDF HPGAKIGTGI LLDHATAIVI GETAVVGNNV SILHNVTLGG
0301: TGKQCGDRHP KIGDGVLIGA GTCILGNITI GEGAKIGAGS VVLKDVPPRT TAVGNPARLL GGKDNPKKHD KDPASFEYLA CYRCLGDDDK TTQELGMLAT
0401: INMNVDITLC FHLHANGWDR SKLMNLVDLL FAALSWGAIS FYLYRNGQKV PFLLRVWWVI YFMVSCCSLW VDIVLYKKQE LESLHLLIYH AVAVTVGLFL
0501: CYSCLQKKQG EGERINLLEE PLLNGGAEEV DEEVVTPFSN AGFLSHMSFS WMGSLIALGN EKIIDSEDVP QVDGSDRAEK LFSIFRSKLD WDDGERRSIT
0601: TFKLIKALFF SARRDIIFST LFAFVYTISC YVAPYLMETF VQYLNGKRQY SNEGFVLVTT FFVAKLVECQ ARRNWYFRLQ KGGIGMRSVL VSMIYEKGLT
0701: LPCHSNQGHT SGEIINLMTV DAERITLLIL YRSLGLGSIV AFAATFLVML GNIPLAKLEE KFQGNLMESK DERMKKTSEV LLNMRILKLQ GWEMKFLSKI
0801: LDLRRIEATW LKKFVYNSAG ISSVLWAAPS LVSATAFGAC MLLKIPLESG KILAALATFR ILQTPIYKLP DTISMIVQTK VSLDRIAAFL CLNDLQQDVV
0901: ERLSSGSSKM DVEVSDGAFS WDESSPIPML RDITFKIPRG MNVAICGTVG SGKTSLLSSI LGEVPKISGD LKVCGSKAYI AQSPWIQSGK VEENILFGKP
1001: MQREWYERVL EACSLNKDLE VLPFRDQTVI GERGINLSGG QKQRIQIARA LYQNADIYLF DDPFSAVDAH TGSHLFREVL LGILRNKTVI YVTHQLEFLP
1101: EADLILVMKD GTITQAGKYN EILDSGTDFM ELVGAHTDAL AAVDSFEKGS ATSQSTTSRE NKVSDDEDNK QEEHLGATPK GQLVQEEERE KGEVGFSVYQ
1201: KYMSLAYGGA LVPVILVVQS LFQILNIGSN YWMAWVTPVS KDVKPPMHLR VFRASMSFFD ATPIGRILNR ASTDQSAVDL RLPSQFSNLL VTAINILGII
1301: GVMGQVAWQV LIVFIPVIAA CTWYRQYYIS AARELARLSG ISRSPLVQHF SETLSGITTI RSFDQEPRFR SDIMRLNDCY SRLRFHAISA MEWLCFRLDL
1401: LSTAAFALSL VILVSIPEGV INPSFAGLAV TYALNLNSLQ ATLIWTLCDL ENKMISVERM LQYIDIPSEP PLVIESTRPE KSWPSCGEIT ICNLQVRYGA
1501: HLPMVLRGLT CTFPGGLKTG IVGRTGCGKS TLIQTLFRIV EPTAGEIRID GVNILTIGLH DLRSRLSIIP QDPTMFEGTV RSNLDPLEEH TDDQIWEALD
1601: KCQLGDEVRK KELKLDSPVS ENGQNWSVGQ RQLVCLGRVL LKRSKVLVLD EATASVDTAT DNLIQETLRQ HFSDCTVITI AHRISSVIDS DMVLLLDQGL
1701: IKEHDSPAKL LEDKSSSFSK LVAEYTATSD SRFRRRS

Best Arabidopsis Sequence Match ( AT3G13100.1 )
(BLAST)

0001: MKQSYAMDNP IVFFLLESNY FPMFSIFFNL LLLLVMFGSC VYKKRLGWEN SDAFTNERFK DMSLTYNKLV VICCETLSAL NSVLLLLSCF NLHKNGWDRS
0101: ELMILLDLLF TALSWGAISF YIRSQFTYSH DQKFPILLRV WWVLYFMFSC YRLLVDIALY KKQELVSVHL LLSDVLAVSV GLFLCYSCLQ KQGQGERINL
0201: LLEEPLLNGA ESSAATSVQL DKAEDDEVVT PFSNAGFLSH VSFSWMSPLI VLGNEKIIDS EDVPQVDNSD RAEKLFWIFR SKLEWDDGER RITTYKLIKA
0301: LFFSVWRDIL LSTLFAFVYT VSCYVAPYLM DTFVQYLNGQ RQYSNQGVVL VTTFFVAKLV ECQARRNWYF RLQKAGIGMR SVLVSMIYEK GLTLPCYSKQ
0401: GHTSGEIINL MTVDAERISA FSWYMHDPWI LVLQISLALL ILYRSLGLGS IAAFAATFLV MLGNIPLAKL EEKFQGNLME SKDNRMKKTS EALLNMRILK
0501: LQGWEMKFLH KILDLRGIEA GWLKKFVYNS AAISSVLWAA PSFVSATAFG ACMLLKIPLE SGKIIAALAT FRILQTPIYK LPDTISMIVQ TKVSLDRIAT
0601: FLCLDDLQQD GMERLPSGSS KMDVEVSNGA FSWDDSSPIP TLKDIRFKIP HGMNIAICGT VGSGKSSLLS SILGEVPKIS GNLKVCGRKA YIAQSPWIQS
0701: GKVEENILFG KPMQREWYQR VLEACSLNKD LEVFPFRDQT VIGERGINLS GGQKQRIQIA RALYQDADIY LFDDPFSAVD AHTGSHLFKE VLLGLLRNKT
0801: VIYVTHQLEF LPEADLILVM KDGRITQAGK YNEILESGTD FMELVGAHTD ALAAVDSYEK GSASAQSTTS KESKVSNDEE KQEEDLPSPK GQLVQEEERE
0901: KGKVGFTVYQ KYMKLAYGGA LVPIILVVQI LFQVLNIGSN YWMAWVTPVS KDVKPLVSGS TLILVYVFLA TASSFCILVR AMLSAMTGFK IATELFNQMH
1001: FRIFRASMSF FDATPIGRIL NRASTDQSAV DLRLPSQFSN LAIAAVNILG IIGVMGQVAW QVLIVFIPVI AACTWYRQYY ISAARELARL SGISRSPLVQ
1101: HFSETLSGIT TIRSFDQEPR FRTDIMRLND CYSRLRFHAI SAMEWLCFRL DLLSTVAFAL SLVILVSVPE GVINPSFAGL AVTYALNLNS LQATLIWTLC
1201: DLENKMISVE RMLQYIDIPS EPSLVIESTR PEKSWPCRGE ITICNLQVRY GPHLPMVLRG LTCTFRGGLK TGIVGRTGCG KSTLIQTLFR IVEPAAGEIR
1301: IDGINILTIG LHDLRSRLSI IPQEPTMFEG TVRSNLDPLE EYADDQIWEA LDKCQLGDEI RKKELKLDSP VSENGQNWSV GQRQLVCLGR VLLKRSKVLI
1401: LDEATASVDT ATDTLIQETL RQHFSGCTVI TIAHRISSVI DSDMVLLLDQ GLIEEHDSPA RLLEDKSSSF SKLVAEYTAS SDSRFKRSSM KTN

Arabidopsis Description

ABCC7ABC transporter C family member 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK62]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.