Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005402.1-P | Field mustard | plasma membrane | 99.63 | 99.63 |
| CDX84290 | Canola | plasma membrane | 99.2 | 99.02 |
| AT2G34660.1 | Thale cress | plasma membrane | 92.99 | 93.16 |
| CDX90247 | Canola | plasma membrane | 86.72 | 86.82 |
| CDY12054 | Canola | plasma membrane | 86.47 | 86.63 |
| CDY09591 | Canola | plasma membrane | 86.1 | 86.21 |
| CDY02289 | Canola | plasma membrane | 85.79 | 85.95 |
| KRH11151 | Soybean | plasma membrane | 76.38 | 76.67 |
| KRH21096 | Soybean | endoplasmic reticulum | 76.01 | 76.3 |
| Solyc08g006880.2.1 | Tomato | nucleus | 75.4 | 75.4 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 57.69 | 73.51 |
| EES12878 | Sorghum | plasma membrane | 72.82 | 72.77 |
| CDY72149 | Canola | cytosol, peroxisome, plasma membrane | 27.31 | 72.55 |
| Zm00001d002275_P029 | Maize | plasma membrane | 72.39 | 72.25 |
| Os04t0620000-01 | Rice | plasma membrane | 71.83 | 71.79 |
| HORVU2Hr1G103620.1 | Barley | plasma membrane | 71.65 | 71.56 |
| TraesCS1A01G404300.1 | Wheat | plasma membrane | 68.14 | 68.95 |
| CDX98202 | Canola | plasma membrane | 61.81 | 68.88 |
| CDY09589 | Canola | plasma membrane | 60.95 | 66.38 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 58.06 | 64.88 |
| CDY02290 | Canola | plasma membrane | 62.24 | 62.66 |
| CDX77595 | Canola | extracellular | 5.97 | 48.26 |
| CDY71198 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 13.04 | 41.9 |
| CDX82557 | Canola | plasma membrane | 12.92 | 41.83 |
| CDY51899 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 13.41 | 40.07 |
| CDY39771 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.86 | 36.26 |
| CDX82552 | Canola | plasma membrane | 26.63 | 35.17 |
| CDX71911 | Canola | plasma membrane | 24.85 | 34.83 |
| CDY06021 | Canola | plasma membrane | 24.72 | 34.54 |
| CDY63884 | Canola | plasma membrane | 25.83 | 34.12 |
| CDY23680 | Canola | plasma membrane | 27.98 | 33.93 |
| CDY64080 | Canola | plasma membrane | 26.45 | 32.8 |
| CDX98408 | Canola | plasma membrane | 26.26 | 32.52 |
| CDY43395 | Canola | plasma membrane | 28.84 | 32.01 |
| CDX76656 | Canola | plasma membrane, plastid | 29.03 | 31.91 |
| CDY43277 | Canola | plastid | 29.27 | 31.78 |
| CDY11440 | Canola | plastid | 28.78 | 31.52 |
| CDX93660 | Canola | plastid | 29.4 | 31.49 |
| CDY37305 | Canola | plasma membrane | 27.43 | 31.41 |
| CDY27531 | Canola | plasma membrane | 27.37 | 31.34 |
| CDX89842 | Canola | plasma membrane | 28.78 | 31.03 |
| CDY18207 | Canola | plasma membrane | 28.72 | 30.95 |
| CDY03309 | Canola | golgi | 27.06 | 30.66 |
| CDY01519 | Canola | plasma membrane | 26.81 | 30.47 |
| CDY06441 | Canola | plasma membrane | 27.43 | 30.44 |
| CDY44021 | Canola | plastid | 27.49 | 25.79 |
| CDY23565 | Canola | plastid | 27.49 | 25.73 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | GO:A0A078H487 | UniProt:A0A078H487 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDY31633 | ProteinID:CDY31633 |
| ProteinID:CDY31633.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00050231001 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF251 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0004EDE6D7 | SEG:seg | : |
Description
BnaA05g09140DBnaA05g09140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H487]
Coordinates
chrLK032277:+:9615..18132
Molecular Weight (calculated)
182425.0 Da
IEP (calculated)
6.204
GRAVY (calculated)
0.041
Length
1626 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGFEEALEWY CKPAPNGVWT KQVDNAFGAY TPCATDSFVL VISHVVLLVL CLYRIWRTMK DHKVERFCMR SRLYSYLLAL LAAYGTAEPL FRLIMGVSVL
0101: DLDGDGLPPY EAFGLGVEAL TWGSVMIMIC METKIYIHEL RWYVRFAVVY ALVGDMVLLN LVLSVKEFYT SYVLYLYISE VAVQVLFGIL LFVHLPNLEP
0201: YPGYMPLGSE TVDDHEYEEL SEGQQICPER HANIFDKIFF SWINPLMTLG SKRPLTETDV WHLDTWDQTE TLFTSFQQSW DKELQKPKPW LLRALNSSLG
0301: GRFWWGGFWK IGNDCSQFVG PLLLNQLLKS MQQDEPAYMG YIYAFSIFVG VVLGVLCEAQ YFQNVMRVGY RLRSALIAAV FRKSLRLTNE GRRKFQTGKI
0401: TNLMTTDAES LQQICQSLHT MWSAPFRIIV ALILLYQQLG VASLIGALLL VLMFPLQTII ISKMQNLTKE GLQRTDKRIG LMNEVLAAMD TVKCYAWENS
0501: FQSKVQTVRD DELSWFRKSQ LLGALNMFIL NSIPVLVTIV SFGVFTLLGG DLTPARAFTS LSLFAVLRFP LFMLPNIITQ VVNANVSLKR LEEVLATEER
0601: ILLPNPPIEP GQPAISIRNG FFSWDAKGDR PTLSNINLDV PLGSLVAVVG STGEGKTSLI SAILGELPAT SDAMVTLRGS VAYVPQVSWI FNATVRDNIL
0701: FGSPFDRERY ERVLDVTALK HDLELLPGGD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VFIFDDPLSA LDAHVGQQVF EKCIKRELGN KTRVLVTNQL
0801: HFLSQVDRII LVHEGTVKEE GTYEELSNNG PLFQRLMENA GKVEEYSEEN GEAEAVQTAI APLTNGTTNT LQMNGTDDKK AKEEIKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPIFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK RLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI TRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAE INGRSMDNNI RFTLVNMSAN RWLGIRLETL GGLMIWLTAS FAVMQNGKAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP SEAPLVIESN RPPPGWPSAG SIKFEDAVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVELEKGRI
1301: LIDECDIGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSTP ENLLSNERSS FSKMVQSTGA ANAEYLRSLV LENKRERDGD
1501: DSQQPLQGQR KWLASTRWAA AAQFALGVSL TSSHNDLQIL EIEDDGSILK RTKDAVVTLR NVLEGKHDKE IAESLEGHNI SRDGWLSSLY RMVEGLAVMS
1601: RLARNRMQQP GYNLEGNSFD WDNVEM
0101: DLDGDGLPPY EAFGLGVEAL TWGSVMIMIC METKIYIHEL RWYVRFAVVY ALVGDMVLLN LVLSVKEFYT SYVLYLYISE VAVQVLFGIL LFVHLPNLEP
0201: YPGYMPLGSE TVDDHEYEEL SEGQQICPER HANIFDKIFF SWINPLMTLG SKRPLTETDV WHLDTWDQTE TLFTSFQQSW DKELQKPKPW LLRALNSSLG
0301: GRFWWGGFWK IGNDCSQFVG PLLLNQLLKS MQQDEPAYMG YIYAFSIFVG VVLGVLCEAQ YFQNVMRVGY RLRSALIAAV FRKSLRLTNE GRRKFQTGKI
0401: TNLMTTDAES LQQICQSLHT MWSAPFRIIV ALILLYQQLG VASLIGALLL VLMFPLQTII ISKMQNLTKE GLQRTDKRIG LMNEVLAAMD TVKCYAWENS
0501: FQSKVQTVRD DELSWFRKSQ LLGALNMFIL NSIPVLVTIV SFGVFTLLGG DLTPARAFTS LSLFAVLRFP LFMLPNIITQ VVNANVSLKR LEEVLATEER
0601: ILLPNPPIEP GQPAISIRNG FFSWDAKGDR PTLSNINLDV PLGSLVAVVG STGEGKTSLI SAILGELPAT SDAMVTLRGS VAYVPQVSWI FNATVRDNIL
0701: FGSPFDRERY ERVLDVTALK HDLELLPGGD LTEIGERGVN ISGGQKQRVS MARAVYSNSD VFIFDDPLSA LDAHVGQQVF EKCIKRELGN KTRVLVTNQL
0801: HFLSQVDRII LVHEGTVKEE GTYEELSNNG PLFQRLMENA GKVEEYSEEN GEAEAVQTAI APLTNGTTNT LQMNGTDDKK AKEEIKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPIFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK RLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI TRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAE INGRSMDNNI RFTLVNMSAN RWLGIRLETL GGLMIWLTAS FAVMQNGKAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP SEAPLVIESN RPPPGWPSAG SIKFEDAVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVELEKGRI
1301: LIDECDIGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSTP ENLLSNERSS FSKMVQSTGA ANAEYLRSLV LENKRERDGD
1501: DSQQPLQGQR KWLASTRWAA AAQFALGVSL TSSHNDLQIL EIEDDGSILK RTKDAVVTLR NVLEGKHDKE IAESLEGHNI SRDGWLSSLY RMVEGLAVMS
1601: RLARNRMQQP GYNLEGNSFD WDNVEM
0001: MGFEFIEWYC KPVPNGVWTK QVANAFGAYT PCATDSFVLG ISQLVLLVLC LYRIWLALKD HKVERFCLRS RLYNYFLALL AAYATAEPLF RLIMGISVLD
0101: FDGPGLPPFE AFGLGVKAFA WGAVMVMILM ETKIYIRELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYSS YVLYLYTSEV GAQVLFGILL FMHLPNLDTY
0201: PGYMPVRSET VDDYEYEEIS DGQQICPEKH ANIFDKIFFS WMNPLMTLGS KRPLTEKDVW YLDTWDQTET LFTSFQHSWD KELQKPQPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNQLLKSM QEDAPAWMGY IYAFSIFVGV VFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RRKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIIA LILLYQQLGV ASLIGALLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
0601: LLPNPPIEPG EPAISIRNGY FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS AILGELPATS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDREKYE RAIDVTSLKH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE KCIKRELGQK TRVLVTNQLH
0801: FLSQVDRIVL VHEGTVKEEG TYEELSSNGP LFQRLMENAG KVEEYSEENG EAEADQTAEQ PVANGNTNGL QMDGSDDKKS KEGNKKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPLFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI SRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI
1301: LIDDCDVGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRAKDDS
1501: HHLQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL EGKHDKEIAE SLEEHNISRE GWLSSLYRMV EGLAVMSRLA
1601: RNRMQQPDYN FEGNTFDWDN VEM
0101: FDGPGLPPFE AFGLGVKAFA WGAVMVMILM ETKIYIRELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYSS YVLYLYTSEV GAQVLFGILL FMHLPNLDTY
0201: PGYMPVRSET VDDYEYEEIS DGQQICPEKH ANIFDKIFFS WMNPLMTLGS KRPLTEKDVW YLDTWDQTET LFTSFQHSWD KELQKPQPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNQLLKSM QEDAPAWMGY IYAFSIFVGV VFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RRKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIIA LILLYQQLGV ASLIGALLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
0601: LLPNPPIEPG EPAISIRNGY FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS AILGELPATS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDREKYE RAIDVTSLKH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE KCIKRELGQK TRVLVTNQLH
0801: FLSQVDRIVL VHEGTVKEEG TYEELSSNGP LFQRLMENAG KVEEYSEENG EAEADQTAEQ PVANGNTNGL QMDGSDDKKS KEGNKKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPLFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI SRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI
1301: LIDDCDVGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRAKDDS
1501: HHLQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL EGKHDKEIAE SLEEHNISRE GWLSSLYRMV EGLAVMSRLA
1601: RNRMQQPDYN FEGNTFDWDN VEM
Arabidopsis Description
ABCC2ABC transporter C family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42093]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.