Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES07974 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34660.1 | EES07974 | AT3G21640.1 | 15133126 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002275_P029 | Maize | plasma membrane | 97.3 | 97.18 |
| Os04t0620000-01 | Rice | plasma membrane | 92.56 | 92.56 |
| HORVU2Hr1G103620.1 | Barley | plasma membrane | 90.53 | 90.48 |
| TraesCS1A01G404300.1 | Wheat | plasma membrane | 86.54 | 87.62 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 61.65 | 78.61 |
| KRH21096 | Soybean | endoplasmic reticulum | 74.43 | 74.75 |
| KRH11151 | Soybean | plasma membrane | 74.25 | 74.57 |
| Solyc08g006880.2.1 | Tomato | nucleus | 74.0 | 74.05 |
| AT2G34660.1 | Thale cress | plasma membrane | 73.45 | 73.63 |
| VIT_10s0003g04470.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 73.2 | 73.34 |
| CDY72149 | Canola | cytosol, peroxisome, plasma membrane | 27.41 | 72.88 |
| CDY31633 | Canola | plasma membrane | 72.77 | 72.82 |
| Bra005402.1-P | Field mustard | plasma membrane | 72.71 | 72.76 |
| CDX84290 | Canola | plasma membrane | 72.83 | 72.74 |
| CDY09591 | Canola | plasma membrane | 72.46 | 72.6 |
| Bra032385.1-P | Field mustard | plasma membrane | 72.4 | 72.58 |
| CDY02289 | Canola | plasma membrane | 72.4 | 72.58 |
| CDY12054 | Canola | plasma membrane | 72.1 | 72.27 |
| Bra010773.1-P | Field mustard | plasma membrane | 70.56 | 72.2 |
| CDX90247 | Canola | plasma membrane | 71.85 | 71.98 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 62.63 | 70.03 |
| AT1G30410.1 | Thale cress | plasma membrane | 63.92 | 69.43 |
| Bra014879.1-P | Field mustard | plasma membrane | 64.17 | 69.05 |
| CDX98202 | Canola | plasma membrane | 61.52 | 68.61 |
| AT1G30420.1 | Thale cress | plasma membrane | 61.89 | 67.36 |
| CDY09589 | Canola | plasma membrane | 60.48 | 65.91 |
| CDY02290 | Canola | plasma membrane | 61.71 | 62.17 |
| Bra032386.1-P | Field mustard | plasma membrane | 53.84 | 60.66 |
| KXG31741 | Sorghum | plasma membrane | 26.61 | 34.56 |
| OQU92792 | Sorghum | plasma membrane | 27.6 | 32.75 |
| EES17847 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 26.06 | 32.32 |
| OQU93255 | Sorghum | plasma membrane | 29.99 | 32.28 |
| KXG26126 | Sorghum | plasma membrane | 28.64 | 31.32 |
| KXG32483 | Sorghum | plasma membrane | 28.58 | 30.75 |
| KXG20196 | Sorghum | plasma membrane | 28.03 | 30.46 |
| EES10452 | Sorghum | plastid | 28.89 | 30.34 |
| EER89345 | Sorghum | plasma membrane | 27.29 | 30.31 |
| KXG27008 | Sorghum | plasma membrane | 29.32 | 29.91 |
| OQU80926 | Sorghum | plasma membrane | 27.11 | 29.76 |
| OQU86956 | Sorghum | plasma membrane | 26.43 | 29.74 |
| KXG40096 | Sorghum | plasma membrane | 27.6 | 29.72 |
| KXG19351 | Sorghum | plasma membrane | 26.92 | 29.51 |
| KXG25638 | Sorghum | plasma membrane | 26.49 | 29.4 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | EntrezGene:8066798 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | UniProt:C5YG52 | ncoils:Coil | EnsemblPlants:EES12878 |
| ProteinID:EES12878 | ProteinID:EES12878.1 | GO:GO:0000166 | GO:GO:0000325 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | ProteinID:OQU82353.1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF251 | SMART:SM00382 |
| EnsemblPlantsGene:SORBI_3006G219300 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | unigene:Sbi.2584 | TMHMM:TMhelix | UniParc:UPI0001A876A3 |
| RefSeq:XP_002448550.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:56642644..56655858
Molecular Weight (calculated)
183016.0 Da
IEP (calculated)
6.882
GRAVY (calculated)
0.060
Length
1627 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGFDPLEWYC QPVKNGVWSL VVENAFGAYT PCGTDTLVVC ISYLALFGVC FYRIWRTTRD YTVQRYKLRS PYYNYLLGLL VVYCIAEPLY RIATGTSIMN
0101: LDGQPGLAPF EIVSLIIESA AWCCMLVMIL LETRIYINEF RWYIRFVVIY VMVGEAAMFN LVLSVRQYYS SSSIFYLYCS EIACQLLFGI LMVVYLPSVD
0201: PYPGYTPIRN EVLVDNTDYE PLPGGEQICP ERHVNVFARI FFSWMTPLMQ QGFRRPITDK DIWKLDSWDE TETLYSQFQK CWNDELRKPK PWLLRALHSS
0301: LWGRFWLGGF FKIGNDASQF VGPLVLNLLL ESMQKGDPSW SGYIYAFSIF AGVSLGVLAE AQYFQNVMRV GFRLRSTLIA AVFRKSLRLT NESRRKFASG
0401: RITNLISTDA ESLQQVCQQL HSLWSAPFRI VISMVLLYAQ LGPAALVGAL MLVLLFPIQT VIISKMQKLT KEGLQRTDKR ISLMNEVLAA MDTVKCYAWE
0501: QSFQSKVQDI RDDELSWFRR AQLLAALNSF ILNSIPVVVT VVSFGVYSLL GGDLTPAKAF TSLSLFAVLR FPLFMLPNLI TQVVNCKVSL KRLEDLLLAE
0601: ERLLLPNPPI DPDLPAISIK NGYFSWESEA QRPTLSNVNL DVPVGSLVAI VGSTGEGKTS LISAMLGEIP PVSGSGTSVV IRGSVAYVPQ VSWIFNATVR
0701: DNILFGSPFQ PPRYEKAIDV TSLRHDLDLL PGGDLTEIGE RGVNISGGQK QRVSMARAVY SDSDVYIFDD PLSALDAHVG RQVFDKCIKG ELQHKTRVLV
0801: TNQLHFLPYV DKILLIHDGV IKEEGTFDEL SNSGELFKKL MENAGKMEEQ VEEDESKPKD VAKQTENGDV IIADEGSQKS QDSSSKTKPG KSVLIKQEER
0901: ETGVVSANVL SRYKNALGGM WVVSILFFCY ALTEVLRISS STWLSIWTDQ GSLKIHGPGY YNLIYGILSF GQVLVTLSNS YWLIISSLRA AKRLHDAMLR
1001: SILRAPMVFF HTNPLGRIIN RFSKDLGDID RNVAVFVNMF MAQISQLLST FVLIGFVSTM SLWAIMPLLI LFYAAYLYYQ ATSREVKRLD SITRSPVYAQ
1101: FSEALNGLST IRAYKAYDRM ANINGRSMDN NIRFTLVNMS ANRWLAIRLE TLGGIMIWFT ATFAVMQNQR AENQKAFAST MGLLLTYTLN ITNLLTAVLR
1201: LASLAENSLN AVERVGTYIE LPSEAPPVIE DHRPPPGWPS SGVIKFEDVV LRYRPELPPV LHGISFLING SEKVGIVGRT GAGKSSMLNA LFRIVELERG
1301: RILIDDCDTS KFGIWDLRKV LGIIPQAPVL FSGSVRFNLD PFNEHNDADL WEALERAHLK DVIRRNPLGL DAEVSEAGEN FSVGQRQLLS LARALLRRAK
1401: ILVLDEATAA VDVRTDALIQ KTIREEFKSC TMLIIAHRLN TVIDCDRLLI LSAGQVLEFD SPENLLSNEE SAFSKMVQST GPSNAEYLKS LVFGSGEERS
1501: RREEIKLQDI QRRWVASNRW AEAAQFALAR SLTSSHSDLL ALEAAEGNNI LRRTKDAVIT LQSVLEGKHN TEIDESLTLY QVPADRWWSS LYKVVEGLAT
1601: MSRLARNRLQ QPAYNFENNG SIDWDQM
0101: LDGQPGLAPF EIVSLIIESA AWCCMLVMIL LETRIYINEF RWYIRFVVIY VMVGEAAMFN LVLSVRQYYS SSSIFYLYCS EIACQLLFGI LMVVYLPSVD
0201: PYPGYTPIRN EVLVDNTDYE PLPGGEQICP ERHVNVFARI FFSWMTPLMQ QGFRRPITDK DIWKLDSWDE TETLYSQFQK CWNDELRKPK PWLLRALHSS
0301: LWGRFWLGGF FKIGNDASQF VGPLVLNLLL ESMQKGDPSW SGYIYAFSIF AGVSLGVLAE AQYFQNVMRV GFRLRSTLIA AVFRKSLRLT NESRRKFASG
0401: RITNLISTDA ESLQQVCQQL HSLWSAPFRI VISMVLLYAQ LGPAALVGAL MLVLLFPIQT VIISKMQKLT KEGLQRTDKR ISLMNEVLAA MDTVKCYAWE
0501: QSFQSKVQDI RDDELSWFRR AQLLAALNSF ILNSIPVVVT VVSFGVYSLL GGDLTPAKAF TSLSLFAVLR FPLFMLPNLI TQVVNCKVSL KRLEDLLLAE
0601: ERLLLPNPPI DPDLPAISIK NGYFSWESEA QRPTLSNVNL DVPVGSLVAI VGSTGEGKTS LISAMLGEIP PVSGSGTSVV IRGSVAYVPQ VSWIFNATVR
0701: DNILFGSPFQ PPRYEKAIDV TSLRHDLDLL PGGDLTEIGE RGVNISGGQK QRVSMARAVY SDSDVYIFDD PLSALDAHVG RQVFDKCIKG ELQHKTRVLV
0801: TNQLHFLPYV DKILLIHDGV IKEEGTFDEL SNSGELFKKL MENAGKMEEQ VEEDESKPKD VAKQTENGDV IIADEGSQKS QDSSSKTKPG KSVLIKQEER
0901: ETGVVSANVL SRYKNALGGM WVVSILFFCY ALTEVLRISS STWLSIWTDQ GSLKIHGPGY YNLIYGILSF GQVLVTLSNS YWLIISSLRA AKRLHDAMLR
1001: SILRAPMVFF HTNPLGRIIN RFSKDLGDID RNVAVFVNMF MAQISQLLST FVLIGFVSTM SLWAIMPLLI LFYAAYLYYQ ATSREVKRLD SITRSPVYAQ
1101: FSEALNGLST IRAYKAYDRM ANINGRSMDN NIRFTLVNMS ANRWLAIRLE TLGGIMIWFT ATFAVMQNQR AENQKAFAST MGLLLTYTLN ITNLLTAVLR
1201: LASLAENSLN AVERVGTYIE LPSEAPPVIE DHRPPPGWPS SGVIKFEDVV LRYRPELPPV LHGISFLING SEKVGIVGRT GAGKSSMLNA LFRIVELERG
1301: RILIDDCDTS KFGIWDLRKV LGIIPQAPVL FSGSVRFNLD PFNEHNDADL WEALERAHLK DVIRRNPLGL DAEVSEAGEN FSVGQRQLLS LARALLRRAK
1401: ILVLDEATAA VDVRTDALIQ KTIREEFKSC TMLIIAHRLN TVIDCDRLLI LSAGQVLEFD SPENLLSNEE SAFSKMVQST GPSNAEYLKS LVFGSGEERS
1501: RREEIKLQDI QRRWVASNRW AEAAQFALAR SLTSSHSDLL ALEAAEGNNI LRRTKDAVIT LQSVLEGKHN TEIDESLTLY QVPADRWWSS LYKVVEGLAT
1601: MSRLARNRLQ QPAYNFENNG SIDWDQM
0001: MGFEFIEWYC KPVPNGVWTK QVANAFGAYT PCATDSFVLG ISQLVLLVLC LYRIWLALKD HKVERFCLRS RLYNYFLALL AAYATAEPLF RLIMGISVLD
0101: FDGPGLPPFE AFGLGVKAFA WGAVMVMILM ETKIYIRELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYSS YVLYLYTSEV GAQVLFGILL FMHLPNLDTY
0201: PGYMPVRSET VDDYEYEEIS DGQQICPEKH ANIFDKIFFS WMNPLMTLGS KRPLTEKDVW YLDTWDQTET LFTSFQHSWD KELQKPQPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNQLLKSM QEDAPAWMGY IYAFSIFVGV VFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RRKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIIA LILLYQQLGV ASLIGALLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
0601: LLPNPPIEPG EPAISIRNGY FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS AILGELPATS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDREKYE RAIDVTSLKH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE KCIKRELGQK TRVLVTNQLH
0801: FLSQVDRIVL VHEGTVKEEG TYEELSSNGP LFQRLMENAG KVEEYSEENG EAEADQTAEQ PVANGNTNGL QMDGSDDKKS KEGNKKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPLFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI SRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI
1301: LIDDCDVGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRAKDDS
1501: HHLQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL EGKHDKEIAE SLEEHNISRE GWLSSLYRMV EGLAVMSRLA
1601: RNRMQQPDYN FEGNTFDWDN VEM
0101: FDGPGLPPFE AFGLGVKAFA WGAVMVMILM ETKIYIRELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYSS YVLYLYTSEV GAQVLFGILL FMHLPNLDTY
0201: PGYMPVRSET VDDYEYEEIS DGQQICPEKH ANIFDKIFFS WMNPLMTLGS KRPLTEKDVW YLDTWDQTET LFTSFQHSWD KELQKPQPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNQLLKSM QEDAPAWMGY IYAFSIFVGV VFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RRKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIIA LILLYQQLGV ASLIGALLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
0601: LLPNPPIEPG EPAISIRNGY FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS AILGELPATS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDREKYE RAIDVTSLKH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE KCIKRELGQK TRVLVTNQLH
0801: FLSQVDRIVL VHEGTVKEEG TYEELSSNGP LFQRLMENAG KVEEYSEENG EAEADQTAEQ PVANGNTNGL QMDGSDDKKS KEGNKKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPLFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI SRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI
1301: LIDDCDVGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRAKDDS
1501: HHLQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL EGKHDKEIAE SLEEHNISRE GWLSSLYRMV EGLAVMSRLA
1601: RNRMQQPDYN FEGNTFDWDN VEM
Arabidopsis Description
ABCC2ABC transporter C family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42093]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.