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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 5
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027625_P001 Maize plasma membrane 95.57 96.78
Os03t0142800-01 Rice plasma membrane 91.07 91.5
TraesCS5A01G512500.2 Wheat endoplasmic reticulum, plasma membrane 86.24 90.49
TraesCS4D01G339000.2 Wheat golgi 89.02 89.67
TraesCS4B01G343800.2 Wheat plasma membrane 88.76 89.17
HORVU4Hr1G084290.1 Barley peroxisome, plastid 83.86 87.93
CDY39771 Canola endoplasmic reticulum, plasma membrane, vacuole 54.23 76.64
GSMUA_Achr8P12730_001 Banana plasma membrane 65.48 72.58
VIT_07s0005g04460.t01 Wine grape plastid 71.23 70.3
GSMUA_Achr11P... Banana plasma membrane 67.33 69.77
Solyc09g064440.2.1 Tomato plastid 70.5 69.63
PGSC0003DMT400022108 Potato plastid 70.5 69.63
KRH67468 Soybean endoplasmic reticulum, plasma membrane, vacuole 69.71 68.49
AT1G04120.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 68.45 68.36
KRH19633 Soybean plasma membrane 68.58 68.36
KRG95750 Soybean plasma membrane 69.44 68.31
CDY18207 Canola plasma membrane 67.99 68.12
Bra015291.1-P Field mustard plasma membrane 67.79 67.97
CDX89842 Canola plasma membrane 67.79 67.97
CDY03309 Canola golgi 63.49 66.9
Bra036682.1-P Field mustard golgi, plasma membrane 63.49 66.71
KXG31741 Sorghum plasma membrane 45.17 54.51
OQU92792 Sorghum plasma membrane 46.69 51.5
KXG40096 Sorghum plasma membrane 47.49 47.52
KXG26126 Sorghum plasma membrane 45.37 46.1
OQU86956 Sorghum plasma membrane 42.33 44.26
KXG27008 Sorghum plasma membrane 46.16 43.76
EES17847 Sorghum endoplasmic reticulum, plasma membrane, vacuole 36.57 42.15
OQU80926 Sorghum plasma membrane 40.67 41.5
KXG19351 Sorghum plasma membrane 40.41 41.17
KXG25638 Sorghum plasma membrane 39.55 40.79
KXG32483 Sorghum plasma membrane 40.01 40.01
KXG20196 Sorghum plasma membrane 39.35 39.75
EES10452 Sorghum plastid 39.35 38.41
EES12878 Sorghum plasma membrane 32.28 29.99
EER89345 Sorghum plasma membrane 28.31 29.21
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300UniProt:A0A1Z5SBX3InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640EnsemblPlants:OQU93255ProteinID:OQU93255
ProteinID:OQU93255.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893
PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF189SMART:SM00382EnsemblPlantsGene:SORBI_3001G508200SUPFAM:SSF52540
SUPFAM:SSF90123SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000B42540ESEG:seg:
Description
hypothetical protein
Coordinates
chr1:-:77596353..77602922
Molecular Weight (calculated)
166569.0 Da
IEP (calculated)
8.071
GRAVY (calculated)
0.203
Length
1512 amino acids
Sequence
(BLAST)
0001: MPPSFPSLPL PEAAAAAAHA ALLALAALLL LLRAARSLAS RCASCLKAPR RRGGPAVVVG AGAGAGGALA ATSAGAWHRA VLASCAYALL AQVAVLSYEV
0101: AVAGSRVAAG ALLLPAVQAV SWAALLALAL QARAVGWARF PALVRVWWVV SFALCVVIAY DDSRRLIGDG ARAVDYAHMV ANFASVPALG FLCLVGVMGS
0201: TGLELEFMED ENGLHEPLLL GRQRREAEEE LGCLRVTPYS DAGILSLATL SWLSPLLSVG AQRPLELADI PLLAHKDRAK SCYKVMSAHY ERQRLEHPGR
0301: EPSLTWAILK SFWREAAVNG TFAAVNTIVS YVGPYLISYF VDYLSGNIAF PHEGYILASI FFVAKLLETL TARQWYLGVD IMGIHVKSGL TAMVYRKGLR
0401: LSNASRQSHT SGEIVNYMAV DVQRVGDYAW YFHDIWMLPL QIILALAILY KNVGIAMVST LVATALSIAA SVPVAKLQEH YQDKLMASKD ERMRKTSECL
0501: KNMRILKLQA WEDRYRLQLE EMRNVECRWL RWALYSQAAV TFVFWSSPIF VAVITFGTCI LLGGQLTAGG VLSALATFRI LQEPLRNFPD LISMMAQTRV
0601: SLDRLSHFLQ QEELPDDATI NVPQSSTDKA IDIKNGAFSW NPYSLTPTLS DIQLSVVRGM RVAVCGVIGS GKSSLLSSIL GEIPKLCGHV RISGTAAYVP
0701: QTAWIQSGNI EENILFGSPM DRQRYKRVIA ACCLKKDLEL LQYGDQTVIG DRGINLSGGQ KQRVQLARAL YQDADIYLLD DPFSAVDAHT GSELFKEYIL
0801: SALATKTVIY VTHQVEFLPA ADLILVLKDG HITQAGKYDD LLQAGTDFNA LVSAHKEAIE TMDIFEDSDG DTVSSIPNKR LTPSISNIDN LKNKVCENGQ
0901: PSNARGIKEK KKKEERKKKR TVQEEERERG RVSSKVYLSY MGEAYKGTLI PLIILAQTMF QVLQIASNWW MAWANPQTEG DAPKTDSVVL LVVYMSLAFG
1001: SSLFVFVRSL LVATFGLAAA QKLFIKMLRC VFRAPMSFFD TTPSGRILNR VSVDQSVVDL DIAFRLGGFA STTIQLLGIV AVMSKVTWQV LILIVPMAIA
1101: CMWMQRYYIA SSRELTRILS VQKSPVIHLF SESIAGAATI RGFGQEKRFM KRNLYLLDCF ARPLFSSLAA IEWLCLRMEL LSTFVFAFCM AILVSFPPGT
1201: IEPSMAGLAV TYGLNLNARM SRWILSFCKL ENRIISVERI YQYCKLPSEA PLIIENCRPP SSWPHNGSIE LIDLKVRYKD DLPLVLHGVS CMFPGGKKIG
1301: IVGRTGSGKS TLIQALFRLI EPTGGKIIID DIDISAIGLH DLRSRLSIIP QDPTLFEGTI RMNLDPLEEC ADQEIWEALE KCQLGEVIRS KEEKLDSPVL
1401: ENGDNWSVGQ RQLIALGRAL LKQAKILVLD EATASVDTAT DNLIQKIIRS EFKDCTVCTI AHRIPTVIDS DLVLVLSDGK IAEFDTPQKL LEDKSSMFMQ
1501: LVSEYSTRSS CI
Best Arabidopsis Sequence Match ( AT1G04120.1 )
(BLAST)
0001: MDFIEISLIF REHLPLLELC SVIINLLLFL VFLFAVSARQ ILVCVRRGRD RLSKDDTVSA SNLSLEREVN HVSVGFGFNL SLLCCLYVLG VQVLVLVYDG
0101: VKVRREVSDW FVLCFPASQS LAWFVLSFLV LHLKYKSSEK LPFLVRIWWF LAFSICLCTM YVDGRRLAIE GWSRCSSHVV ANLAVTPALG FLCFLAWRGV
0201: SGIQVTRSSS DLQEPLLVEE EAACLKVTPY STAGLVSLIT LSWLDPLLSA GSKRPLELKD IPLLAPRDRA KSSYKVLKSN WKRCKSENPS KPPSLARAIM
0301: KSFWKEAACN AVFAGLNTLV SYVGPYLISY FVDYLGGKEI FPHEGYVLAG IFFTSKLIET VTTRQWYMGV DILGMHVRSA LTAMVYRKGL KLSSIAKQNH
0401: TSGEIVNYMA VDVQRIGDYS WYLHDIWMLP MQIVLALAIL YKSVGIAAVA TLVATIISIL VTIPLAKVQE DYQDKLMTAK DERMRKTSEC LRNMRVLKLQ
0501: AWEDRYRVRL EEMREEEYGW LRKALYSQAF VTFIFWSSPI FVAAVTFATS IFLGTQLTAG GVLSALATFR ILQEPLRNFP DLVSMMAQTK VSLDRISGFL
0601: QEEELQEDAT VVIPRGLSNI AIEIKDGVFC WDPFSSRPTL SGIQMKVEKG MRVAVCGTVG SGKSSFISCI LGEIPKISGE VRICGTTGYV SQSAWIQSGN
0701: IEENILFGSP MEKTKYKNVI QACSLKKDIE LFSHGDQTII GERGINLSGG QKQRVQLARA LYQDADIYLL DDPFSALDAH TGSDLFRDYI LSALAEKTVV
0801: FVTHQVEFLP AADLILVLKE GRIIQSGKYD DLLQAGTDFK ALVSAHHEAI EAMDIPSPSS EDSDENPIRD SLVLHNPKSD VFENDIETLA KEVQEGGSAS
0901: DLKAIKEKKK KAKRSRKKQL VQEEERVKGK VSMKVYLSYM GAAYKGALIP LIILAQAAFQ FLQIASNWWM AWANPQTEGD ESKVDPTLLL IVYTALAFGS
1001: SVFIFVRAAL VATFGLAAAQ KLFLNMLRSV FRAPMSFFDS TPAGRILNRV SIDQSVVDLD IPFRLGGFAS TTIQLCGIVA VMTNVTWQVF LLVVPVAVAC
1101: FWMQKYYMAS SRELVRIVSI QKSPIIHLFG ESIAGAATIR GFGQEKRFIK RNLYLLDCFV RPFFCSIAAI EWLCLRMELL STLVFAFCMV LLVSFPHGTI
1201: DPSMAGLAVT YGLNLNGRLS RWILSFCKLE NKIISIERIY QYSQIVGEAP AIIEDFRPPS SWPATGTIEL VDVKVRYAEN LPTVLHGVSC VFPGGKKIGI
1301: VGRTGSGKST LIQALFRLIE PTAGKITIDN IDISQIGLHD LRSRLGIIPQ DPTLFEGTIR ANLDPLEEHS DDKIWEALDK SQLGDVVRGK DLKLDSPVLE
1401: NGDNWSVGQR QLVSLGRALL KQAKILVLDE ATASVDTATD NLIQKIIRTE FEDCTVCTIA HRIPTVIDSD LVLVLSDGRV AEFDTPARLL EDKSSMFLKL
1501: VTEYSSRSTG IPEL
Arabidopsis Description
ABCC5MRP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGC2]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.