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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0902100-00 Rice plasma membrane 59.61 83.61
TraesCS3D01G387200.1 Wheat plasma membrane 80.01 79.46
TraesCS3B01G425500.1 Wheat cytosol, peroxisome, plasma membrane 80.29 79.36
TraesCS3A01G393500.1 Wheat cytosol, peroxisome, plasma membrane 79.94 78.32
HORVU3Hr1G088900.8 Barley plasma membrane, vacuole 79.39 76.74
Solyc05g014390.2.1 Tomato cytosol 13.69 70.46
VIT_01s0010g02440.t01 Wine grape mitochondrion 39.42 70.46
PGSC0003DMT400045009 Potato cytosol, peroxisome, plasma membrane 55.6 63.91
PGSC0003DMT400044938 Potato plasma membrane 59.82 59.41
GSMUA_Achr11P... Banana golgi 54.43 58.34
KRH58734 Soybean plasma membrane 57.12 56.89
KRH42626 Soybean plasma membrane 57.19 56.84
GSMUA_Achr5P25430_001 Banana plasma membrane 52.28 56.71
Solyc05g014380.2.1 Tomato plasma membrane 44.19 56.3
KXG31741 Sorghum plasma membrane 42.81 49.4
OQU92792 Sorghum plasma membrane 44.05 46.46
KXG40096 Sorghum plasma membrane 44.47 42.55
OQU93255 Sorghum plasma membrane 44.26 42.33
KXG26126 Sorghum plasma membrane 42.19 40.99
KXG27008 Sorghum plasma membrane 43.91 39.81
EES17847 Sorghum endoplasmic reticulum, plasma membrane, vacuole 36.03 39.71
OQU80926 Sorghum plasma membrane 37.34 36.44
KXG20196 Sorghum plasma membrane 37.48 36.21
KXG25638 Sorghum plasma membrane 36.58 36.08
KXG19351 Sorghum plasma membrane 36.86 35.92
KXG32483 Sorghum plasma membrane 36.24 34.66
EES10452 Sorghum plastid 35.48 33.12
EER89345 Sorghum plasma membrane 26.83 26.48
EES12878 Sorghum plasma membrane 29.74 26.43
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300UniProt:A0A1W0VXX5InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640EnsemblPlants:OQU86956ProteinID:OQU86956ProteinID:OQU86956.1
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24223PANTHER:PTHR24223:SF222SMART:SM00382EnsemblPlantsGene:SORBI_3003G177350SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0009DC93C5SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:-:45492374..45498134
Molecular Weight (calculated)
161433.0 Da
IEP (calculated)
7.635
GRAVY (calculated)
0.203
Length
1446 amino acids
Sequence
(BLAST)
0001: MEILLALDYV RLSAFAVLLL WVIGEFLTLK EGEHEAGSGV VISAERKGVT LLPSHIISVC NALITSIHIG FAVLGVWKHQ TISLGFIFAS LSWILVTLFS
0101: VYCKHKGAGL GSNWPAVLVY WWVFSSLLES LLTSLHLLHL INSATVVNFT SLPFCAIICL CLLAIAMRTS EANQDELNQP LLTREDSGDS RRDRFSSSRW
0201: WSQLTFQWLN PVFEKGHHVR LEIEHIPAVP QSETADQSYA LLQETMHKQK TEPMSLQKGI ICAVWTPLVI NAVFAGLNTL ASYMGPFLIT YLVKLLSDKN
0301: PDRGHGHGYM LASLFFVSKT VESLSQRQWY FGARRIGFRV RAALMVSIYK KSLLIKDSPA GTGRIVNFLD VDVEKIGEFF WYIHGIWLLP LQVSLALVIL
0401: YHSLGMAASL SAVFATVLIM VSNTPLAKSQ KNLNMKIMEA KDSRIKATAE ALKSMRILKL HAWETAYLDK LLKLRDVERG LLRRYLYTCS AIAFLFWASP
0501: TLVSVVTFGI CILVDIPLSA GTVLSALATF RILQDPIYNL PELVSMVTQT KVSLDRIEEF IKEDHHTKPS IYCSRSSTEK QSVAGIVEIG AGEYSWEATD
0601: NSLKNTKFTL KIDRKVDIMK GHKVAVCGPV GSGKSSLLCA IMGEIPRVSG AKTMVVGSRA YVPQSAWIQT GTIQDNVLFG KAMDKARYDE VLQGCALNKD
0701: VELWASGDMT VVGERGMNLS GGQKQRIQLS RALYSDADVY LLDDPFSAVD AHTGAHLFKE CLMSQMSSKT VIYVTHQLEF LRDADLVLVM KDGRIVQSGK
0801: YDNLIADKDG EFSKQMDAHN KSLSQVNPAK VQGLGTNKIY KKQMELTEIE PDHTVLGRES EEERESGRVK WGIYRKFVTS AYRGALIPVI LACQVLFQSL
0901: QICSNYWIAW ASERKELVSR EKMIGIFVLL SAGSSVFILG RAFVLSAIAI ETAQQLFLGM IKNIFRAPIN FFDSTPSSRI LNRASTDQST VDIDIPYRLA
1001: GLIFALIQLL SIIFIMSQIA WPILFLFIVI VSISTCYQSY YISSARELAR LVGIKKAPIL HHFSETISGA ATIRCFNQGE LFLRKSLTLI DDYSRITFHN
1101: AAAIEWLCVR INFLFNLVFF VMLVILVSLP HDTIDPSLAG LAATYGLNLN VLQAWVIWNL CDVENKMISV ERIMQFSNMP SESPLVVEDN RPMERWPWYG
1201: TIQIDGLQIT YNLDMPMVLK GISCTFPGER KIGVVGRTGS GKSTLIQALF RIVEPSAGRI LIDGVDISLL GLHDLRSRLS IIPQEPTLFQ GTVRSNLDPL
1301: QQHTDAEIWE VASKCCLEEI IREDNRLLDA PVVEDGGNWS GGQRQLVCLA RVLLMKRKIL VLDEATASVD TATDNIIQRT IRQETKTCTV ITIAHRIPTV
1401: IDSDLVLVLG EGRILEYDSP NNLLRDESSA FSKLVMEFVG RTDNVN
Best Arabidopsis Sequence Match ( AT1G04120.1 )
(BLAST)
0001: MDFIEISLIF REHLPLLELC SVIINLLLFL VFLFAVSARQ ILVCVRRGRD RLSKDDTVSA SNLSLEREVN HVSVGFGFNL SLLCCLYVLG VQVLVLVYDG
0101: VKVRREVSDW FVLCFPASQS LAWFVLSFLV LHLKYKSSEK LPFLVRIWWF LAFSICLCTM YVDGRRLAIE GWSRCSSHVV ANLAVTPALG FLCFLAWRGV
0201: SGIQVTRSSS DLQEPLLVEE EAACLKVTPY STAGLVSLIT LSWLDPLLSA GSKRPLELKD IPLLAPRDRA KSSYKVLKSN WKRCKSENPS KPPSLARAIM
0301: KSFWKEAACN AVFAGLNTLV SYVGPYLISY FVDYLGGKEI FPHEGYVLAG IFFTSKLIET VTTRQWYMGV DILGMHVRSA LTAMVYRKGL KLSSIAKQNH
0401: TSGEIVNYMA VDVQRIGDYS WYLHDIWMLP MQIVLALAIL YKSVGIAAVA TLVATIISIL VTIPLAKVQE DYQDKLMTAK DERMRKTSEC LRNMRVLKLQ
0501: AWEDRYRVRL EEMREEEYGW LRKALYSQAF VTFIFWSSPI FVAAVTFATS IFLGTQLTAG GVLSALATFR ILQEPLRNFP DLVSMMAQTK VSLDRISGFL
0601: QEEELQEDAT VVIPRGLSNI AIEIKDGVFC WDPFSSRPTL SGIQMKVEKG MRVAVCGTVG SGKSSFISCI LGEIPKISGE VRICGTTGYV SQSAWIQSGN
0701: IEENILFGSP MEKTKYKNVI QACSLKKDIE LFSHGDQTII GERGINLSGG QKQRVQLARA LYQDADIYLL DDPFSALDAH TGSDLFRDYI LSALAEKTVV
0801: FVTHQVEFLP AADLILVLKE GRIIQSGKYD DLLQAGTDFK ALVSAHHEAI EAMDIPSPSS EDSDENPIRD SLVLHNPKSD VFENDIETLA KEVQEGGSAS
0901: DLKAIKEKKK KAKRSRKKQL VQEEERVKGK VSMKVYLSYM GAAYKGALIP LIILAQAAFQ FLQIASNWWM AWANPQTEGD ESKVDPTLLL IVYTALAFGS
1001: SVFIFVRAAL VATFGLAAAQ KLFLNMLRSV FRAPMSFFDS TPAGRILNRV SIDQSVVDLD IPFRLGGFAS TTIQLCGIVA VMTNVTWQVF LLVVPVAVAC
1101: FWMQKYYMAS SRELVRIVSI QKSPIIHLFG ESIAGAATIR GFGQEKRFIK RNLYLLDCFV RPFFCSIAAI EWLCLRMELL STLVFAFCMV LLVSFPHGTI
1201: DPSMAGLAVT YGLNLNGRLS RWILSFCKLE NKIISIERIY QYSQIVGEAP AIIEDFRPPS SWPATGTIEL VDVKVRYAEN LPTVLHGVSC VFPGGKKIGI
1301: VGRTGSGKST LIQALFRLIE PTAGKITIDN IDISQIGLHD LRSRLGIIPQ DPTLFEGTIR ANLDPLEEHS DDKIWEALDK SQLGDVVRGK DLKLDSPVLE
1401: NGDNWSVGQR QLVSLGRALL KQAKILVLDE ATASVDTATD NLIQKIIRTE FEDCTVCTIA HRIPTVIDSD LVLVLSDGRV AEFDTPARLL EDKSSMFLKL
1501: VTEYSSRSTG IPEL
Arabidopsis Description
ABCC5MRP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGC2]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.