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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d045097_P001 Maize plasma membrane 92.97 93.03
TraesCS7B01G052900.1 Wheat plasma membrane 78.77 79.2
HORVU7Hr1G030540.15 Barley vacuole 77.88 78.2
KRH23646 Soybean plasma membrane 58.63 58.52
CDY01519 Canola plasma membrane 55.29 56.6
AT2G07680.3 Thale cress plasma membrane 54.61 56.1
Solyc03g117540.2.1 Tomato extracellular 56.38 55.77
Bra012617.1-P Field mustard plasma membrane 54.13 55.45
VIT_09s0018g00310.t01 Wine grape plasma membrane 50.38 54.07
KXG31741 Sorghum plasma membrane 25.8 30.17
EES17847 Sorghum endoplasmic reticulum, plasma membrane, vacuole 26.14 29.19
OQU92792 Sorghum plasma membrane 26.89 28.74
OQU93255 Sorghum plasma membrane 29.21 28.31
KXG32483 Sorghum plasma membrane 28.4 27.51
KXG26126 Sorghum plasma membrane 27.92 27.49
EES12878 Sorghum plasma membrane 30.31 27.29
KXG19351 Sorghum plasma membrane 27.58 27.22
OQU80926 Sorghum plasma membrane 27.44 27.13
KXG25638 Sorghum plasma membrane 26.96 26.94
OQU86956 Sorghum plasma membrane 26.48 26.83
KXG40096 Sorghum plasma membrane 27.65 26.8
EES10452 Sorghum plastid 27.99 26.47
KXG27008 Sorghum plasma membrane 28.74 26.39
KXG20196 Sorghum plasma membrane 26.55 25.99
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSUniProt:C5Z5T9EnsemblPlants:EER89345ProteinID:EER89345ProteinID:EER89345.2
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24223PANTHER:PTHR24223:SF330SMART:SM00382EnsemblPlantsGene:SORBI_3010G066200SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0007F2017CSEG:seg:::
Description
hypothetical protein
Coordinates
chr10:+:5300146..5313369
Molecular Weight (calculated)
163425.0 Da
IEP (calculated)
7.136
GRAVY (calculated)
0.223
Length
1465 amino acids
Sequence
(BLAST)
0001: MDFVCPGDPA VWDDDGGHFG PCFADLVLGF AGNAIATAAA LGLFLAKRNT SRAQNVRRGL LEKLFAFGVP GFSACLSLVG LTVLAKKKFE GKYVENYELF
0101: FTCSQFIAWM SVSLVCVSGA WFEILYNPIM CFCWILKIIL EIPHLQYKLT LLKAMTSFME IISFCTATTF GLFVILAAVV GQSGNKREVN SIEAPLILND
0201: EKSEGEITNT IKDYNLWELL TFKFVNPVMD IGITRQLDFT DLLELPTELR ATSCYDKLMS SWTVEYQNHR DNSSLLRAMS YSYGWTYLRL GLLKVLNDSI
0301: NFVSPLLLNK FIRLLQEGSD GMDGYILAIS LGLTSIIKSF LDSQYSFRLA KLKLTLRSSI MGIIYRKCLC LSIAERSRFS EGEIQTFMSV DADRTINLCN
0401: SLHDAWSLPL QIGVALYLLY TQVNYAFLSG LAITIILIPV NKWISTRIAG ATEKMMKQKD RRISCAGELL AHIRTVKMYS WEKLFTERLV ERRESEVKHL
0501: ATRKYLDAWC VYFWATTPTL FSLFTFSIFA IMGHTLDAAT VFTCVALFNT LISPLNSFPW VINGMIDAVI SSRRLSNYLS TPEHHSSKLT TSADLLNHHF
0601: KRYTEVTHNP MAIVLQNVSC SWSSSSVAEP SIVLRDISLQ LQKGLFIAIV GEVGSGKSSL LNTVIGETHV ISGSISSCDS IAYVPQVPWI LSGTLRDNIL
0701: LGKEFDPRRY EEVIEACALR VDISAMARGD MSHIGEKGTN LSGGQRARLA LARALYHNSD VYLFDDILSA VDSQVASWIL EKAVMGHQLM QKKTRLLSTH
0801: NLQAISAADM IVVMANGLIK WFGTPQSFLA TPYSRISKPD NSSPTSFAAS LKDKTPMVTC ELKTDVILED SAVSYEETKD QIEEEARKQG KVELGVYKKY
0901: AAFAGWSAVV LIFLSAFIMQ ASRNSNDLWL TYWVDTSTGT NNTKFYLIIL AMFGIINSLF TLGRAFSFAF GGLRAAIHIH ASLLENIISA PICFFDQNPS
1001: GRILNRLSSD LYTVDDSLPF IINIFVANFF SLLGTLVVLS YSQVSFLLIL LPLWLIYRKL QFYYRSTSRE VRRLDSVARS PIYSSFTETL DGSSTIRAFQ
1101: NEGFFLERFI QHVTLYQKTS YSELIASLWL SLRLQLLAGF IILFIAMMAT ISFHSSSLVN FATPGLVGLA LSYAAPVVSL LNGFLTTFTE TEKEMISVER
1201: VDEYIGIPQE ELQGSEPLPR SWPTKGKIEF EHVTLKYKSE LPPALSDVSF LIASGMQVGI IGRTGAGKSS ILNALFRLVP ICNGRILVDG IDLAKVAVRE
1301: LRGHFAVVPQ SPFLFDGSLR ENLDPFNTTT DLRIWEVLEN CHMKGEVESI GGLDIHVKES GASFSVGQRQ LLCLARAILK SSKVLCLDEC TANVDNQTAF
1401: LLQSTISSEC KGMTVLTIAH RISTVMQMDN ILVLDQGKLV EEGNPEALMN HRFSRFAQYA KASQM
Best Arabidopsis Sequence Match ( AT2G07680.3 )
(BLAST)
0001: MAITLTNFTF LYMDANLKRL GDIVLGFGAN VVTLLLILIL TITRRNGRCN RRKSYIEKCL LYVTPALGAC LSCVDLVLLV RTNRRREVIL CFVPLSGFVM
0101: WIAVILSLKF ACCACHVFTS QILCFWWIFR FLTDALHLNM IFTLQEICLI MLDIAFGISI NVLRIKQAHP KIIPLEDPLI EDDDDQKRIE KNGSWWDLFT
0201: FGYIGSIMKH GSVKQLELEN LLTLPPEMDP FTCCENLLRC WQLQECNNYS TPSLIWSIYG VYGWPYFRLG LLKVFNDCIG FAGPLLLNRL IKYLEKGSGS
0301: SVGYTLAISL GFISIFKSFL DTQYTFRLSK LKLKLRSSIM SVIYRKCLWV NTANRSGFSE GEIQTFMSVD ADRIVNLCNS LHDLWSLPLQ IGIALYLLYT
0401: QVKFAFLSGL AITILLIPVN KWISVLIASA TEKMMKLKDE RIRKTGELLT NIRTLKMYGW DNWFADWLKE TRATEVTHLA TRKYLDAWCV FFWATTPTLF
0501: SLCTFGLFAL MGHQLDAATV FTCLALFNSL ISPLNSFPWV INGLIDAFIS TRRVSKFLCC LEHSRDFSID SGFTSEDLAV CVEDASCTWS SNVEEDYNLT
0601: IKQVSLRVPK GSFVAVIGEV GSGKTSLLNS LLGEMRCVHG SILLNGSVAY VPQVPWLLSG TVRENILFGK PFDSKRYFET LSACALDVDI SLMVGGDMAC
0701: IGDKGLNLSG GQRARFALAR AVYHGSDMYL LDDVLSAVDS QVGCWILQRA LLGPLLNKKT RVMCTHNIQA ISCADMIVVM DKGKVNWSGS VTDMPKSISP
0801: TFSLTNEFDM SSPNHLTKRK ETLSIKEDGV DEISEAAADI VKLEERKEGR VEMMVYRNYA VFSGWFITIV ILVSAVLMQG SRNGNDLWLS YWVDKTGKGV
0901: SHYSTSFYLM VLCIFCIINS ILTLVRAFSF AFGGLKAAVH VHNALISKLI NAPTQFFDQT PSGRILNRFS SDLYTIDDSL PFILNILLAN FVGLLGIIVV
1001: LSYVQVLFLL LLLPFWYIYS KLQVFYRSTS RELRRLDSVS RSPIYASFTE TLDGSSTIRA FKSEEHFVGR FIEHLTLYQR TSYSEIIASL WLSLRLQLLG
1101: SMIVLFVAVM AVLGSGGNFP ISFGTPGLVG LALSYAAPLV SLLGSLLTSF TETEKEMVSV ERVLQYMDVP QEEVSGPQSL SDKWPVHGLV EFHNVTMRYI
1201: STLPPALTQI SFTIQGGMHV GVIGRTGAGK SSILNALFRL TPVCSGEILV DGKNISHLPI RELRSCLAVV PQSPFLFQGS LRDNLDPLGL SEDWRIWEIL
1301: DKCKVKAAVE SVGGLDSYVK ESGCSFSVGQ RQLLCLARAL LKSSKILCLD ECTANIDVHT ASLLHNTISS ECKGVTVITI AHRISTVVDL DSILILDRGI
1401: LVEQGKPQHL LQDDSSTFSS FVRASQ
Arabidopsis Description
ATMRP11multidrug resistance-associated protein 11 [Source:TAIR;Acc:AT2G07680]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.