Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • golgi 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
TargetP:mitochondrion
YLoc:plasma membrane
vacuole: 16581873
msms PMID: 16581873 doi
A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt
University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G052900.1 Wheat plasma membrane 91.84 91.97
EER89345 Sorghum plasma membrane 78.2 77.88
Zm00001d045097_P001 Maize plasma membrane 77.18 76.91
KRH23646 Soybean plasma membrane 56.75 56.4
CDY01519 Canola plasma membrane 55.17 56.25
AT2G07680.3 Thale cress plasma membrane 54.63 55.89
Solyc03g117540.2.1 Tomato extracellular 56.0 55.17
Bra012617.1-P Field mustard plasma membrane 53.6 54.69
VIT_09s0018g00310.t01 Wine grape plasma membrane 50.17 53.63
HORVU2Hr1G009680.2 Barley plastid 22.89 30.14
HORVU4Hr1G084290.1 Barley peroxisome, plastid 28.86 29.2
HORVU3Hr1G024210.3 Barley vacuole 27.69 28.37
HORVU3Hr1G085890.7 Barley plasma membrane 27.55 27.37
HORVU2Hr1G105430.1 Barley cytosol, peroxisome, plasma membrane 28.72 27.24
HORVU3Hr1G022850.3 Barley plasma membrane 27.0 26.82
HORVU2Hr1G103620.1 Barley plasma membrane 29.75 26.66
HORVU7Hr1G088210.25 Barley plasma membrane 26.8 26.51
HORVU7Hr1G024960.12 Barley golgi 26.8 26.33
HORVU2Hr1G022560.5 Barley mitochondrion 27.42 26.09
HORVU3Hr1G088900.8 Barley plasma membrane, vacuole 26.25 25.6
HORVU2Hr1G009580.3 Barley plastid 23.92 23.63
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300UniProt:A0A287VX18InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
EnsemblPlantsGene:HORVU7Hr1G030540EnsemblPlants:HORVU7Hr1G030540.15InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223
PANTHER:PTHR24223:SF330SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI000B46EE5A
SEG:seg:::::
Description
No Description!
Coordinates
chrchr7H:-:60849678..60866979
Molecular Weight (calculated)
162282.0 Da
IEP (calculated)
7.679
GRAVY (calculated)
0.217
Length
1459 amino acids
Sequence
(BLAST)
0001: AVTIGNRFSA LPFLNFPLRR TVLGLGGNVV AAVAVLALFV ARRNDASTTE NVRRRLPEKL FVFGVPSFAA CLSLLGLILL VKKEVEGIDV PNHESFFRCS
0101: QFLAWVAVLV SANGPWSQVL CNPIMCICWM LKILLEIPHL QYTLTKMKAL AYFTEIVSFS MSVTFGLLLI VITVVGKLSN KREVNSIEAP LIPNSENSED
0201: GSANLVKKHP NIWELLTFNS VNPIMDIGIR RQLDFTDLLE LPAELRPASC YEKLLSSWTA EQQTYHAESS ILRAMFYAYG WSYLRLGILK VINDSINFIS
0301: PLLLNKFIRL IQEGSVGMDG YIIAISLGLT SIIKSFLDTQ YSFRLAKLKL MLRSSMMGIV YRKCLCLSLS ERSRFSEGGI QTFMSVDVDR TVNISNNLHD
0401: AWSFPLQIGL ALYLLYTQVN YAFLSGLTIT IILIPVNKWI STRIATATQN MMKQKDERIS CAGELLAHIR TVKMYSWDKL FTQRLNKRRA LEVKHLATRK
0501: YLDAWCVYFW ATTPTLFSLF TFSIFAIMGH SLDAATVFTC VALFNTLISP LNSLPWVING MIDSVISSRR LHNYLSTPEH CSSELTISTD TVNDDFNRNT
0601: EKIYDPTAVI IRNLCCSWSS VSTVEPHIIL RDISLQLQKG LFIAIVGEVG SGKSSLLNSI IGEMSVISGS INSCGSIAYV PQVPWILSGS LRENILLGKG
0701: FDTRRYEEVI QACTLDIDIS TMIAGDMSHI GEKGLNLSGG QRARLALARA LYHDSDIYLF DDILSAVDSQ VASWILEKAI MGPQMKRKTR LLSTHSLQAI
0801: YAADMIVVMA DGFVKWFGTL DSFLATPYSR ISNPDSSSAV SATSSQKDKG PSTSESKTKD VLDNGSAVDQ EEQKDQTEAE GRKEGMVEII VYKKYATLAG
0901: WSMVFLIFVS AFLMQSSRNG NDLWLTYWVD SSSGTNNTRF YLTILAGFGI INSFFTLGRA FSFAYGGLCA AIQIHADLLG SLIGAPVSFF DKNPSGRILN
1001: RLSSDLYTVD DSLPFILNIF VANFFSLLGT LIVLCYSQVT FLLILVPLWL IYSKVQFYYR STSREVRRLD SVARSPIYSS FTETLDGSST IRAFQKEGFF
1101: LERFVQHLTL YQKTSYSELT ASLWLSLRLQ LLAGLIILFI AVMSVVGFHS NSPVNFGTPG LVGLALSYAA PVVSLLNSFL TTFTETEKEM ISVERVVEYV
1201: GIPQEELQGS ESPDRSWPTE GKIEFEHVTL KYKPDLPPAL NEISFHIPSG MQVGIIGRTG AGKSSILNAL FRLTPICNGR ILVDGFDVAK VAVRDLRGHF
1301: AVVPQSPFLF DGSLRENLDP FSITTDIRIW EALEKCHMKA EIESIGGLDI HVKESGGSFS VGQRQLLCLA RAILKSSKVL CLDECTANVD NQTAFLLQKT
1401: ISAECKGMTV LTIAHRISTV MKMDNILVLD QGKLVEEGNP EVLMNDNRSR FSRFAKASM
Best Arabidopsis Sequence Match ( AT2G07680.3 )
(BLAST)
0001: MAITLTNFTF LYMDANLKRL GDIVLGFGAN VVTLLLILIL TITRRNGRCN RRKSYIEKCL LYVTPALGAC LSCVDLVLLV RTNRRREVIL CFVPLSGFVM
0101: WIAVILSLKF ACCACHVFTS QILCFWWIFR FLTDALHLNM IFTLQEICLI MLDIAFGISI NVLRIKQAHP KIIPLEDPLI EDDDDQKRIE KNGSWWDLFT
0201: FGYIGSIMKH GSVKQLELEN LLTLPPEMDP FTCCENLLRC WQLQECNNYS TPSLIWSIYG VYGWPYFRLG LLKVFNDCIG FAGPLLLNRL IKYLEKGSGS
0301: SVGYTLAISL GFISIFKSFL DTQYTFRLSK LKLKLRSSIM SVIYRKCLWV NTANRSGFSE GEIQTFMSVD ADRIVNLCNS LHDLWSLPLQ IGIALYLLYT
0401: QVKFAFLSGL AITILLIPVN KWISVLIASA TEKMMKLKDE RIRKTGELLT NIRTLKMYGW DNWFADWLKE TRATEVTHLA TRKYLDAWCV FFWATTPTLF
0501: SLCTFGLFAL MGHQLDAATV FTCLALFNSL ISPLNSFPWV INGLIDAFIS TRRVSKFLCC LEHSRDFSID SGFTSEDLAV CVEDASCTWS SNVEEDYNLT
0601: IKQVSLRVPK GSFVAVIGEV GSGKTSLLNS LLGEMRCVHG SILLNGSVAY VPQVPWLLSG TVRENILFGK PFDSKRYFET LSACALDVDI SLMVGGDMAC
0701: IGDKGLNLSG GQRARFALAR AVYHGSDMYL LDDVLSAVDS QVGCWILQRA LLGPLLNKKT RVMCTHNIQA ISCADMIVVM DKGKVNWSGS VTDMPKSISP
0801: TFSLTNEFDM SSPNHLTKRK ETLSIKEDGV DEISEAAADI VKLEERKEGR VEMMVYRNYA VFSGWFITIV ILVSAVLMQG SRNGNDLWLS YWVDKTGKGV
0901: SHYSTSFYLM VLCIFCIINS ILTLVRAFSF AFGGLKAAVH VHNALISKLI NAPTQFFDQT PSGRILNRFS SDLYTIDDSL PFILNILLAN FVGLLGIIVV
1001: LSYVQVLFLL LLLPFWYIYS KLQVFYRSTS RELRRLDSVS RSPIYASFTE TLDGSSTIRA FKSEEHFVGR FIEHLTLYQR TSYSEIIASL WLSLRLQLLG
1101: SMIVLFVAVM AVLGSGGNFP ISFGTPGLVG LALSYAAPLV SLLGSLLTSF TETEKEMVSV ERVLQYMDVP QEEVSGPQSL SDKWPVHGLV EFHNVTMRYI
1201: STLPPALTQI SFTIQGGMHV GVIGRTGAGK SSILNALFRL TPVCSGEILV DGKNISHLPI RELRSCLAVV PQSPFLFQGS LRDNLDPLGL SEDWRIWEIL
1301: DKCKVKAAVE SVGGLDSYVK ESGCSFSVGQ RQLLCLARAL LKSSKILCLD ECTANIDVHT ASLLHNTISS ECKGVTVITI AHRISTVVDL DSILILDRGI
1401: LVEQGKPQHL LQDDSSTFSS FVRASQ
Arabidopsis Description
ATMRP11multidrug resistance-associated protein 11 [Source:TAIR;Acc:AT2G07680]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.