Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU5Hr1G041060.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34660.1 | HORVU5Hr1G041060.1 | AT3G21640.1 | 15133126 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G404300.1 | Wheat | plasma membrane | 91.58 | 92.78 |
| Os04t0620000-01 | Rice | plasma membrane | 90.54 | 90.6 |
| EES12878 | Sorghum | plasma membrane | 90.48 | 90.53 |
| Zm00001d002275_P029 | Maize | plasma membrane | 89.93 | 89.87 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 60.2 | 76.8 |
| KRH21096 | Soybean | endoplasmic reticulum | 73.34 | 73.7 |
| KRH11151 | Soybean | plasma membrane | 73.28 | 73.64 |
| Solyc08g006880.2.1 | Tomato | nucleus | 72.85 | 72.94 |
| AT2G34660.1 | Thale cress | plasma membrane | 71.99 | 72.21 |
| VIT_10s0003g04470.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 71.99 | 72.17 |
| CDY12054 | Canola | plasma membrane | 71.68 | 71.9 |
| CDY72149 | Canola | cytosol, peroxisome, plasma membrane | 27.03 | 71.9 |
| CDX84290 | Canola | plasma membrane | 71.87 | 71.82 |
| Bra032385.1-P | Field mustard | plasma membrane | 71.56 | 71.78 |
| Bra010773.1-P | Field mustard | plasma membrane | 70.09 | 71.76 |
| CDY02289 | Canola | plasma membrane | 71.5 | 71.72 |
| CDY31633 | Canola | plasma membrane | 71.56 | 71.65 |
| CDY09591 | Canola | plasma membrane | 71.44 | 71.61 |
| Bra005402.1-P | Field mustard | plasma membrane | 71.5 | 71.59 |
| CDX90247 | Canola | plasma membrane | 71.25 | 71.43 |
| AT1G30410.1 | Thale cress | plasma membrane | 63.15 | 68.62 |
| Bra014879.1-P | Field mustard | plasma membrane | 63.27 | 68.12 |
| CDX98202 | Canola | plasma membrane | 60.75 | 67.79 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 60.57 | 67.77 |
| AT1G30420.1 | Thale cress | plasma membrane | 61.06 | 66.49 |
| CDY09589 | Canola | plasma membrane | 59.58 | 64.97 |
| CDY02290 | Canola | plasma membrane | 60.93 | 61.42 |
| Bra032386.1-P | Field mustard | plasma membrane | 53.01 | 59.76 |
| HORVU2Hr1G009680.2 | Barley | plastid | 22.91 | 33.66 |
| HORVU4Hr1G084290.1 | Barley | peroxisome, plastid | 29.55 | 33.36 |
| HORVU3Hr1G024210.3 | Barley | vacuole | 27.58 | 31.53 |
| HORVU2Hr1G105430.1 | Barley | cytosol, peroxisome, plasma membrane | 29.3 | 31.01 |
| HORVU3Hr1G022850.3 | Barley | plasma membrane | 27.58 | 30.57 |
| HORVU7Hr1G088210.25 | Barley | plasma membrane | 27.58 | 30.44 |
| HORVU3Hr1G085890.7 | Barley | plasma membrane | 26.9 | 29.82 |
| HORVU7Hr1G030540.15 | Barley | vacuole | 26.66 | 29.75 |
| HORVU3Hr1G088900.8 | Barley | plasma membrane, vacuole | 27.33 | 29.75 |
| HORVU7Hr1G024960.12 | Barley | golgi | 26.78 | 29.36 |
| HORVU2Hr1G022560.5 | Barley | mitochondrion | 27.21 | 28.9 |
| HORVU2Hr1G009580.3 | Barley | plastid | 24.94 | 27.49 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | UniProt:A0A287J912 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 |
| GO:GO:0055085 | EnsemblPlantsGene:HORVU2Hr1G103620 | EnsemblPlants:HORVU2Hr1G103620.1 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24223 | PANTHER:PTHR24223:SF251 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| UniParc:UPI000B461045 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:700556517..700568844
Molecular Weight (calculated)
182793.0 Da
IEP (calculated)
7.586
GRAVY (calculated)
0.018
Length
1628 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSKPLEWYC QPVKDGAWSR AVESAFGAYT PCGIDTLVVC ISYLALFCVC FYRIWRTTKD YKVQRYKIRS PYYNYLLGLL VAYCIAEPLY KIVTGTSIMN
0101: LDGQSGLAPF EVTSLVIEIA AWCCMLTMIL LETKIYITEF RWYIRFVVIY VLVGKAAMFN VVLPVRQYYS SSSIFYLYCS EIICQCIFGI LMVVYLPSLD
0201: PYPGYTPIRS ELLVDNTDYE PLPGGEQICP ERHANILSRI FFSWMTPLMQ QGYKRPITDN DIWKLDDWDE TETLYNRFQK YWNDELQKPK PWLLRALHNS
0301: LWGRFWLGGF FKIGNDASQF VGPTVLSLLL ESMQKGDPSW NGYIYAFSIF AGVSLGVLAE AQYFQNVMRT GFRLRSTLIA AVFRKSLRLT NDSRKKFASG
0401: RITNLISTDA ESLQQVCQQL HSLWSAPFRI VIAMVLLYAQ LGPAALIGAL MLALLIPIQT VIIGKMQKLT KEGLQRTDKR ISLMNEILAA MDTVKCYAWE
0501: QSFQSKVQDI RDDELSWFRS AQLLAALNSF ILNSIPVVVT VVSFGVYSLL GGELTAAKAF TSLSLFAVLR FPLFMLPNLI TQVVNCKVSL KRLEDLLLAD
0601: ERILLPNPPI DPQLPAISIK NGNFSWELQA ERPTLSNVNL DVPVGSLVAI VGSTGEGKTS LISAMLGEIP PVSGSDTSVV IRGSVAYVPQ VSWIFNATVR
0701: DNILFGSPFQ PPRYGRAIDA TALRHDLDLL PGGDLTEIGE RGVNISGGQK QRVSMARAVY SDSDVYLFDD PLSALDAHVG RQVFDKCIKE ELRHKTRVLV
0801: TNQLHFLPYV DKILLIHDGV VKEEGTFDEL SNTGEQFKKL MENAGKMEEQ TEEKQDESKS QDDTKHTENG AVVIADGAPQ KSQDSSSKTK QGKSVLIKQE
0901: ERETGVVSTK VLSRYKNAMG GIWAVSVLFV CYALTETLRI SSSTWLSIWT DEGSLKIHGP GYYNLIYGIL SFGQVLVTLT NSYWLITSSL RAAKKLHDYM
1001: LRSILRAPMV FFHTNPLGRI INRFSKDLGD IDRNLAVFVN MFMAQISQLL STFILIGVVS TMSLWAIMPL LILFYAAYLY YQTTSREVKR MDSITRSPVY
1101: AQFSEALNGL STIRAYKAYD RMSNINGKSM DNNIRFTLVN MSSNRWLAIR LETLGGIMIW FTATFAVMQN QRAENQKAFA STMGLLLTYT LNITNLLTAV
1201: LRLASLAENS MNAVERVGTY IELPSEAPPV IEDNRPPPGW PSSGIIKFED VVLRYRPELP PVLHGISFII NGSEKVGIVG RTGAGKSSML NALFRIVELE
1301: RGRILIDDCD TKKFGIWDLR KVLGIIPQAP VLFSGTIRFN LDPFSEHNDA DLWEALERAH LKDVIRRNAL GLDAEVSEAG ENFSVGQRQL LSLARALLRR
1401: AKILVLDEAT AAVDVRTDAL IQKTIREEFK SCTMLIIAHR LNTVIDCDRL LILSSGKISE FDTPENLLSN EDGAFSKMVQ STGPSNAEYL KSLVLGNGEE
1501: RLRKEESKLQ DIQRKWAASN RWAVAAQFAL AASLASSHSD LLSLEVAEGN SILRKTKDAV ITLQSVLEGK HNTEIEESLT EYQVPPDRWW SSLYKVIEGL
1601: ATMSKLGRNR RQPGYSFENH GSIDWDQI
0101: LDGQSGLAPF EVTSLVIEIA AWCCMLTMIL LETKIYITEF RWYIRFVVIY VLVGKAAMFN VVLPVRQYYS SSSIFYLYCS EIICQCIFGI LMVVYLPSLD
0201: PYPGYTPIRS ELLVDNTDYE PLPGGEQICP ERHANILSRI FFSWMTPLMQ QGYKRPITDN DIWKLDDWDE TETLYNRFQK YWNDELQKPK PWLLRALHNS
0301: LWGRFWLGGF FKIGNDASQF VGPTVLSLLL ESMQKGDPSW NGYIYAFSIF AGVSLGVLAE AQYFQNVMRT GFRLRSTLIA AVFRKSLRLT NDSRKKFASG
0401: RITNLISTDA ESLQQVCQQL HSLWSAPFRI VIAMVLLYAQ LGPAALIGAL MLALLIPIQT VIIGKMQKLT KEGLQRTDKR ISLMNEILAA MDTVKCYAWE
0501: QSFQSKVQDI RDDELSWFRS AQLLAALNSF ILNSIPVVVT VVSFGVYSLL GGELTAAKAF TSLSLFAVLR FPLFMLPNLI TQVVNCKVSL KRLEDLLLAD
0601: ERILLPNPPI DPQLPAISIK NGNFSWELQA ERPTLSNVNL DVPVGSLVAI VGSTGEGKTS LISAMLGEIP PVSGSDTSVV IRGSVAYVPQ VSWIFNATVR
0701: DNILFGSPFQ PPRYGRAIDA TALRHDLDLL PGGDLTEIGE RGVNISGGQK QRVSMARAVY SDSDVYLFDD PLSALDAHVG RQVFDKCIKE ELRHKTRVLV
0801: TNQLHFLPYV DKILLIHDGV VKEEGTFDEL SNTGEQFKKL MENAGKMEEQ TEEKQDESKS QDDTKHTENG AVVIADGAPQ KSQDSSSKTK QGKSVLIKQE
0901: ERETGVVSTK VLSRYKNAMG GIWAVSVLFV CYALTETLRI SSSTWLSIWT DEGSLKIHGP GYYNLIYGIL SFGQVLVTLT NSYWLITSSL RAAKKLHDYM
1001: LRSILRAPMV FFHTNPLGRI INRFSKDLGD IDRNLAVFVN MFMAQISQLL STFILIGVVS TMSLWAIMPL LILFYAAYLY YQTTSREVKR MDSITRSPVY
1101: AQFSEALNGL STIRAYKAYD RMSNINGKSM DNNIRFTLVN MSSNRWLAIR LETLGGIMIW FTATFAVMQN QRAENQKAFA STMGLLLTYT LNITNLLTAV
1201: LRLASLAENS MNAVERVGTY IELPSEAPPV IEDNRPPPGW PSSGIIKFED VVLRYRPELP PVLHGISFII NGSEKVGIVG RTGAGKSSML NALFRIVELE
1301: RGRILIDDCD TKKFGIWDLR KVLGIIPQAP VLFSGTIRFN LDPFSEHNDA DLWEALERAH LKDVIRRNAL GLDAEVSEAG ENFSVGQRQL LSLARALLRR
1401: AKILVLDEAT AAVDVRTDAL IQKTIREEFK SCTMLIIAHR LNTVIDCDRL LILSSGKISE FDTPENLLSN EDGAFSKMVQ STGPSNAEYL KSLVLGNGEE
1501: RLRKEESKLQ DIQRKWAASN RWAVAAQFAL AASLASSHSD LLSLEVAEGN SILRKTKDAV ITLQSVLEGK HNTEIEESLT EYQVPPDRWW SSLYKVIEGL
1601: ATMSKLGRNR RQPGYSFENH GSIDWDQI
0001: MGFEFIEWYC KPVPNGVWTK QVANAFGAYT PCATDSFVLG ISQLVLLVLC LYRIWLALKD HKVERFCLRS RLYNYFLALL AAYATAEPLF RLIMGISVLD
0101: FDGPGLPPFE AFGLGVKAFA WGAVMVMILM ETKIYIRELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYSS YVLYLYTSEV GAQVLFGILL FMHLPNLDTY
0201: PGYMPVRSET VDDYEYEEIS DGQQICPEKH ANIFDKIFFS WMNPLMTLGS KRPLTEKDVW YLDTWDQTET LFTSFQHSWD KELQKPQPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNQLLKSM QEDAPAWMGY IYAFSIFVGV VFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RRKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIIA LILLYQQLGV ASLIGALLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
0601: LLPNPPIEPG EPAISIRNGY FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS AILGELPATS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDREKYE RAIDVTSLKH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE KCIKRELGQK TRVLVTNQLH
0801: FLSQVDRIVL VHEGTVKEEG TYEELSSNGP LFQRLMENAG KVEEYSEENG EAEADQTAEQ PVANGNTNGL QMDGSDDKKS KEGNKKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPLFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI SRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI
1301: LIDDCDVGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRAKDDS
1501: HHLQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL EGKHDKEIAE SLEEHNISRE GWLSSLYRMV EGLAVMSRLA
1601: RNRMQQPDYN FEGNTFDWDN VEM
0101: FDGPGLPPFE AFGLGVKAFA WGAVMVMILM ETKIYIRELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYSS YVLYLYTSEV GAQVLFGILL FMHLPNLDTY
0201: PGYMPVRSET VDDYEYEEIS DGQQICPEKH ANIFDKIFFS WMNPLMTLGS KRPLTEKDVW YLDTWDQTET LFTSFQHSWD KELQKPQPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNQLLKSM QEDAPAWMGY IYAFSIFVGV VFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RRKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIIA LILLYQQLGV ASLIGALLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
0601: LLPNPPIEPG EPAISIRNGY FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS AILGELPATS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDREKYE RAIDVTSLKH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE KCIKRELGQK TRVLVTNQLH
0801: FLSQVDRIVL VHEGTVKEEG TYEELSSNGP LFQRLMENAG KVEEYSEENG EAEADQTAEQ PVANGNTNGL QMDGSDDKKS KEGNKKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPLFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI SRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI
1301: LIDDCDVGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRAKDDS
1501: HHLQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL EGKHDKEIAE SLEEHNISRE GWLSSLYRMV EGLAVMSRLA
1601: RNRMQQPDYN FEGNTFDWDN VEM
Arabidopsis Description
ABCC2ABC transporter C family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42093]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.