Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G30420.1 | Thale cress | plasma membrane | 89.85 | 90.03 |
| CDY09589 | Canola | plasma membrane | 85.25 | 85.53 |
| CDY02290 | Canola | plasma membrane | 85.51 | 79.32 |
| Bra032386.1-P | Field mustard | plasma membrane | 74.7 | 77.49 |
| VIT_10s0003g04470.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 75.17 | 69.33 |
| EES12878 | Sorghum | plasma membrane | 69.43 | 63.92 |
| AT2G34660.1 | Thale cress | plasma membrane | 68.89 | 63.59 |
| Zm00001d002275_P029 | Maize | plasma membrane | 69.09 | 63.54 |
| Os04t0620000-01 | Rice | plasma membrane | 68.83 | 63.37 |
| HORVU2Hr1G103620.1 | Barley | plasma membrane | 68.62 | 63.15 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 53.27 | 62.54 |
| TraesCS1A01G404300.1 | Wheat | plasma membrane | 65.42 | 60.98 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 54.21 | 55.81 |
| AT3G60970.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 25.57 | 36.37 |
| AT1G04120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 31.11 | 30.78 |
| AT2G47800.1 | Thale cress | plasma membrane | 30.64 | 30.28 |
| AT3G62700.1 | Thale cress | plasma membrane | 30.97 | 30.15 |
| AT3G13100.1 | Thale cress | plasma membrane | 29.91 | 30.01 |
| AT2G07680.3 | Thale cress | plasma membrane | 28.5 | 29.94 |
| AT3G59140.1 | Thale cress | plasma membrane | 28.97 | 29.87 |
| AT3G60160.1 | Thale cress | plasma membrane | 29.57 | 29.42 |
| AT3G21250.4 | Thale cress | plasma membrane | 28.57 | 29.12 |
| AT3G13080.1 | Thale cress | plasma membrane, plastid | 28.91 | 28.6 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | EntrezGene:839921 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ArrayExpress:AT1G30410 | EnsemblPlantsGene:AT1G30410 | RefSeq:AT1G30410 |
| TAIR:AT1G30410 | RefSeq:AT1G30410-TAIR-G | EnsemblPlants:AT1G30410.1 | TAIR:AT1G30410.1 | Symbol:ATMRP13 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | PO:PO:0000293 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24223 | PANTHER:PTHR24223:SF251 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| UniParc:UPI000848608E | SEG:seg | : | : | : | : |
Description
ATMRP13multidrug resistance-associated protein 13 [Source:TAIR;Acc:AT1G30410]
Coordinates
chr1:+:10738805..10747509
Molecular Weight (calculated)
168322.0 Da
IEP (calculated)
8.316
GRAVY (calculated)
0.128
Length
1498 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGFEALNWYC KPVADGFWEK AVDGAFGAYT PCAIDSLVML VSHFVLLGLC FYRIWIIFHN TKAQIYVLRK KYYNCVLGLL ACYCVVEPVL RLVMGISLFD
0101: MDEETDFPPF EVASLMVEAF AWFSMLVLIG LETKQYVKEF RWYVRFGVLY VLVADAVLLD LVLPLKNSIN RTALYLFISS RCSQALFGIL LLIYIPELDP
0201: YPGYHIVNNE PLDNVEYDAL RGGEHICPER HASIFSRIYF GWITPLMQLG YRKPITEKDV WQLDKWDQTE TLIKRFQRCW TEESRRPKPW LLRALNNSLG
0301: GRFWLAGIFK VTRIGNDLSQ FVGPVILSHL LRSMQEGDPA WVGYVYAFII FVGVTLGVLC EAQYFQNVWR VGFRLRSTLV AAIFHKSLRL THEARKNFAS
0401: GKVTNMITTD ANALQQISQQ LHGLWSAPFR IIVSMILLYQ QLGVASLFGS LILFLLIPLQ TLIISKMRKL TKEGLQWTDK RVGITNEILS SMDTVKCYAW
0501: EKSFESRIQG IRNEELSWFR KAQLLSAFNS FILNSIPVVV TVVSFGVFVL LGGDLTPARA FTSLSLFAVL RFPLNMLPNL LSQVVNANVS LQRIEELLLS
0601: EERILAQNPP LQPGTPAISI KNGYFSWDSK TTKPTLSDIN LEIPVGTLVA IVGGTGEGKT SLISAMLGEL SHAETTSVVI RGSVAYVPQV SWIFNATVRE
0701: NILFGSDFES ERYWRAIDAT ALQHDLDLLP GRDLTEIGER GVNISGGQKQ RVSMARAVYS NSDVYIFDDP LSALDAHVAH QVFDSCMKDE LRGKTRVLVT
0801: NQLHFLPLMD KIILVSEGMI KEEGTFVELS KSGILFKKLM ENAGKMDATQ EVNTNDENIL KLGPTVTVDV SERNLGSTKQ GKRRRSVLIK QEERETGIIS
0901: WNVLMRYKEA VGGLWVVMIL LACYLATEVL RVSSSTWLSI WTDQSTSKNY SPGFYIVVYA LLGFGQVAVT FTNSFWLITS SLHAARRLHD AMLSSILRAP
1001: MLFFHTNPTG RVINRFSKDI GDIDRNVANL MNMFMNQLWQ LLSTFALIGT VSTISLWAIM PLLILFYAAY LYYQSTSREV RRLDSVTRSP IYAQFGEALN
1101: GLSSIRAYKA YDRMAKINGK SMDNNIRFTL ANTSSNRWLT IRLETLGGVM IWLTATFAVL QNGNTNNQAG FASTMGLLLS YTLNITSLLS GVLRQASRAE
1201: NSLNSVERVG NYIDLPSEAT DIIENNRPVC GWPSGGSIKF EDVHLRYRPG LPPVLHGLTF FVSPSEKVGV VGRTGAGKSS MLNALFRIVE VEKGRIMIDD
1301: CDVAKFGLTD VRRVLSIIPQ SPVLFSGTVR FNIDPFSEHN DAGLWEALHR AHIKDVISRN PFGLDAEVCE GGENFSVGQR QLLSLARALL RRSKILVLDE
1401: ATASVDVRTD SLIQRTIREE FKSCTMLVIA HRLNTIIDCD KILVLSSGQV LEYDSPQELL SRDTSAFFRM VHSTGPANAQ YLSNLVFERR ENGMSVGG
0101: MDEETDFPPF EVASLMVEAF AWFSMLVLIG LETKQYVKEF RWYVRFGVLY VLVADAVLLD LVLPLKNSIN RTALYLFISS RCSQALFGIL LLIYIPELDP
0201: YPGYHIVNNE PLDNVEYDAL RGGEHICPER HASIFSRIYF GWITPLMQLG YRKPITEKDV WQLDKWDQTE TLIKRFQRCW TEESRRPKPW LLRALNNSLG
0301: GRFWLAGIFK VTRIGNDLSQ FVGPVILSHL LRSMQEGDPA WVGYVYAFII FVGVTLGVLC EAQYFQNVWR VGFRLRSTLV AAIFHKSLRL THEARKNFAS
0401: GKVTNMITTD ANALQQISQQ LHGLWSAPFR IIVSMILLYQ QLGVASLFGS LILFLLIPLQ TLIISKMRKL TKEGLQWTDK RVGITNEILS SMDTVKCYAW
0501: EKSFESRIQG IRNEELSWFR KAQLLSAFNS FILNSIPVVV TVVSFGVFVL LGGDLTPARA FTSLSLFAVL RFPLNMLPNL LSQVVNANVS LQRIEELLLS
0601: EERILAQNPP LQPGTPAISI KNGYFSWDSK TTKPTLSDIN LEIPVGTLVA IVGGTGEGKT SLISAMLGEL SHAETTSVVI RGSVAYVPQV SWIFNATVRE
0701: NILFGSDFES ERYWRAIDAT ALQHDLDLLP GRDLTEIGER GVNISGGQKQ RVSMARAVYS NSDVYIFDDP LSALDAHVAH QVFDSCMKDE LRGKTRVLVT
0801: NQLHFLPLMD KIILVSEGMI KEEGTFVELS KSGILFKKLM ENAGKMDATQ EVNTNDENIL KLGPTVTVDV SERNLGSTKQ GKRRRSVLIK QEERETGIIS
0901: WNVLMRYKEA VGGLWVVMIL LACYLATEVL RVSSSTWLSI WTDQSTSKNY SPGFYIVVYA LLGFGQVAVT FTNSFWLITS SLHAARRLHD AMLSSILRAP
1001: MLFFHTNPTG RVINRFSKDI GDIDRNVANL MNMFMNQLWQ LLSTFALIGT VSTISLWAIM PLLILFYAAY LYYQSTSREV RRLDSVTRSP IYAQFGEALN
1101: GLSSIRAYKA YDRMAKINGK SMDNNIRFTL ANTSSNRWLT IRLETLGGVM IWLTATFAVL QNGNTNNQAG FASTMGLLLS YTLNITSLLS GVLRQASRAE
1201: NSLNSVERVG NYIDLPSEAT DIIENNRPVC GWPSGGSIKF EDVHLRYRPG LPPVLHGLTF FVSPSEKVGV VGRTGAGKSS MLNALFRIVE VEKGRIMIDD
1301: CDVAKFGLTD VRRVLSIIPQ SPVLFSGTVR FNIDPFSEHN DAGLWEALHR AHIKDVISRN PFGLDAEVCE GGENFSVGQR QLLSLARALL RRSKILVLDE
1401: ATASVDVRTD SLIQRTIREE FKSCTMLVIA HRLNTIIDCD KILVLSSGQV LEYDSPQELL SRDTSAFFRM VHSTGPANAQ YLSNLVFERR ENGMSVGG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.