Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG25638 Sorghum plasma membrane 90.01 91.0
Zm00001d031447_P003 Maize plastid 89.14 88.3
KXG19351 Sorghum plasma membrane 87.58 87.47
TraesCS7D01G114300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 57.89 83.22
Os06t0158900-00 Rice plasma membrane 81.92 81.86
TraesCS7B01G016500.1 Wheat plasma membrane 81.58 81.63
TraesCS7D01G116300.2 Wheat plasma membrane 81.24 81.3
TraesCSU01G093100.1 Wheat plasma membrane 81.17 81.23
TraesCS7A01G119500.1 Wheat cytosol, peroxisome, plasma membrane 69.16 80.71
TraesCS7A01G119800.1 Wheat plasma membrane 46.63 80.63
TraesCSU01G159700.1 Wheat cytosol, peroxisome, plasma membrane 68.62 80.08
TraesCS7D01G115900.1 Wheat plasma membrane 69.77 80.03
HORVU7Hr1G024960.12 Barley golgi 79.96 79.8
TraesCS2B01G529000.2 Wheat plasma membrane 69.57 79.68
TraesCS7A01G118900.2 Wheat plasma membrane 79.15 79.2
TraesCS7A01G119000.1 Wheat plasma membrane 75.64 74.78
TraesCS2D01G131000.1 Wheat plastid 75.57 74.72
TraesCS2B01G150600.1 Wheat plasma membrane 75.64 74.68
TraesCS2A01G128500.1 Wheat plasma membrane 75.17 74.52
HORVU2Hr1G022560.5 Barley mitochondrion 74.7 72.21
KRG91620 Soybean plasma membrane 59.65 71.29
GSMUA_Achr10P... Banana plasma membrane 56.48 68.61
CDX71911 Canola plasma membrane 53.51 68.36
CDY06021 Canola plasma membrane 53.44 68.04
VIT_16s0050g02480.t01 Wine grape plasma membrane 64.91 65.0
KRH35194 Soybean endoplasmic reticulum, nucleus, plasma membrane 64.31 64.44
PGSC0003DMT400023487 Potato plasma membrane 63.56 64.26
Solyc03g007530.2.1 Tomato plasma membrane 63.09 63.74
VIT_16s0050g02280.t01 Wine grape cytosol, golgi, plasma membrane 55.74 63.3
Solyc06g036490.1.1 Tomato plastid 50.54 62.78
KRH08764 Soybean plasma membrane 62.62 62.66
AT3G59140.1 Thale cress plasma membrane 59.85 61.05
Bra007434.1-P Field mustard golgi, plasma membrane, plastid 59.45 60.72
VIT_02s0025g00930.t01 Wine grape plasma membrane 56.48 59.66
KRH08755 Soybean plasma membrane 59.85 59.02
PGSC0003DMT400074333 Potato mitochondrion 60.73 58.29
PGSC0003DMT400018927 Potato plasma membrane 49.6 58.19
VIT_02s0025g00970.t01 Wine grape plasma membrane 58.5 58.19
VIT_02s0025g00950.t01 Wine grape plasma membrane 57.49 57.65
Solyc08g081890.2.1 Tomato endoplasmic reticulum, nucleus, plasma membrane 55.67 55.78
EES17847 Sorghum endoplasmic reticulum, plasma membrane, vacuole 39.54 44.66
KXG31741 Sorghum plasma membrane 37.52 44.37
KXG20196 Sorghum plasma membrane 41.63 41.22
OQU92792 Sorghum plasma membrane 37.99 41.06
OQU93255 Sorghum plasma membrane 41.5 40.67
KXG40096 Sorghum plasma membrane 38.39 37.66
OQU86956 Sorghum plasma membrane 36.44 37.34
KXG32483 Sorghum plasma membrane 37.25 36.51
KXG26126 Sorghum plasma membrane 36.44 36.29
KXG27008 Sorghum plasma membrane 37.31 34.67
EES10452 Sorghum plastid 35.43 33.89
EER89345 Sorghum plasma membrane 27.13 27.44
EES12878 Sorghum plasma membrane 29.76 27.11
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300UniProt:A0A1B6PJ33InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640ProteinID:KXG25637.1EnsemblPlants:OQU80926ProteinID:OQU80926
ProteinID:OQU80926.1ProteinID:OQU80927.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF192SMART:SM00382EnsemblPlantsGene:SORBI_3007G210500
SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI00081AD7EBSEG:seg:
Description
hypothetical protein
Coordinates
chr7:+:63933998..63944356
Molecular Weight (calculated)
164842.0 Da
IEP (calculated)
8.037
GRAVY (calculated)
0.209
Length
1482 amino acids
Sequence
(BLAST)
0001: MASLTSSWMA GMCGSPFCSK EASASCGWEE ILNSSTCTNH ILAIGIATLI VIVLAIHLFV RIAKSRPHVQ LLVALTSPLQ LAAVVFNGCL GLIYLGLALW
0101: MLGTNFSQHA SVYLPHRWLV NLSQGVSLIL ISFAFSIRSQ FLGAAFFRVW SVLLTTYAAF VCCTSVVYMI ADKVLGMKAC LDVLSLPGAL LLLVYGIWHV
0201: REDGNGGVES ALYKPLNTET HEDTAGSESH VTPFAKAGIF SVMTFWWLNP MMKVGYEKPL EDKDMPLLGP SDRAYSQYLM FLENLNRKKQ LQAYGNPSVF
0301: WTIVSCHKSE ILVSGFFALL KVVTLSSGPV ILKAFINVSL GKGSFKYEAY ILAATMFVTK CFESLSQRQW YFRTRRLGLQ VRSFLSAAIY KKQQKLSSSS
0401: KLKHSSGEII NYVTVDAYRI GEFPYWFHQT WTTSVQLCIA LVILYNAVGL AMIASLVVIV LTVICNAPLA KLQHKFQSKL MEAQDVRLKA MSESLIHMKV
0501: LKLYAWETHF KKVIEGLRET EIKWLSAFQL RKSYNSFLFW TSPVLVSSAT FFTCYLLKIP LDASNVFTFV ATLRLVQDPI RQIPDVIGVV IQAKVAFTRI
0601: TKFLDAPELN GQVRKKYCVG NEYPIVMNSC SFSWDENPSK PTLKNINLVV KAGEKVAICG EVGSGKSTLL AAVLGEVPKT EGMIQVCGKI AYVSQNAWIQ
0701: SGTVQDNILF GSSMDRQRYQ ETLERCSLVK DLEMLPYGDN TQIGERGVNL SGGQKQRVQL ARALYQNADI YLLDDPFSAV DAHTATSLFN EYVMGALSDK
0801: TVLLVTHQVD FLPVFDSVLL MSDGKIIRSA PYQDLLAYCQ EFQNLVNAHK DTIGVSDLNR VGPHRGNEIL IKGSIDIRGT LYKESLKPSP ADQLIKTEER
0901: EMGDTGLKPY ILYLRQNKGF FNASLGVLCH IIFLSGQISQ NSWMAANVQN PDVNTLKLIS VYIAIGIFTV FFLLFRSLAL VVLGVQTSRS LFSQLLNSLF
1001: RAPMSFFDST PLGRVLSRVS SDLSIVDLDV PFGLMFAAGA SLNAYSNLGV LAVVTWQVLF VIVPMMVLAL RLQRYYLASA KELMRINGTT KSALANHLGE
1101: SVAGAITIRA FEEEDRFFEK NLELIDKNAG SYFYNFAATE WLIQRLETMS AAVLSFSAFI MALLPPGTFS SGFIGMALSY GLSLNNSFVF SIQNQCQLSN
1201: QIISVERVNQ YMDIPSEAAE IIEENRPSPN WPQVGRVDLR DLKIRYRQDA PLVLHGITCT FEGGDKIGIV GRTGSGKTTL IGALFRLVEP TGGKIIIDSV
1301: DITTIGLHDL RSRLGIIPQD PTLFQGTIRY NLDPLGQFSD QQIWEVLDKC QLLEAVQEKE QGLDSLVVED GSNWSMGQRQ LFCLGRALLR RCRILVLDEA
1401: TASIDNATDA ILQKTIRAEF RDCTVITVAH RIPTVMDCNM VLAMSDGKLV EYDKPTKLME TEGSLFRDLV KEYWSYTSNG NI
Best Arabidopsis Sequence Match ( AT3G59140.1 )
(BLAST)
0001: MIENYWTSFC GNHHTSSNCT VRFLQICFGI TLSFLTLCIC LFHKEPPKRI HQFFCLRLVS ALFNGIIGSL DLVLGIWVLR ENHSKPLILW LVILIQGFTW
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR
Arabidopsis Description
ABCC10ABC transporter C family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYS2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.