CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
vacuole 4
extracellular 3
endoplasmic reticulum 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06021	Canola	plasma membrane	98.28	97.94
AT3G59140.1	Thale cress	plasma membrane	92.93	74.19
KRG91620	Soybean	plasma membrane	74.83	70.0
Zm00001d045279_P001	Maize	plasma membrane	26.81	67.9
TraesCS7D01G114300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.36	65.66
TraesCS7A01G119800.1	Wheat	plasma membrane	47.5	64.29
VIT_16s0050g02280.t01	Wine grape	cytosol, golgi, plasma membrane	68.02	60.46
TraesCSU01G159700.1	Wheat	cytosol, peroxisome, plasma membrane	64.48	58.9
TraesCS2B01G529000.2	Wheat	plasma membrane	65.34	58.58
KRH35194	Soybean	endoplasmic reticulum, nucleus, plasma membrane	74.57	58.49
TraesCS7A01G119500.1	Wheat	cytosol, peroxisome, plasma membrane	63.88	58.35
Solyc06g036490.1.1	Tomato	plastid	60.0	58.34
PGSC0003DMT400023487	Potato	plasma membrane	73.71	58.32
VIT_16s0050g02480.t01	Wine grape	plasma membrane	74.4	58.31
TraesCS7D01G115900.1	Wheat	plasma membrane	64.66	58.05
Solyc03g007530.2.1	Tomato	plasma membrane	73.28	57.94
TraesCS4A01G227600.1	Wheat	cytosol, golgi, mitochondrion, plasma membrane	57.5	57.25
KRH08764	Soybean	plasma membrane	71.47	55.98
GSMUA_Achr10P...	Banana	plasma membrane	56.72	53.93
OQU80926	Sorghum	plasma membrane	68.36	53.51
Zm00001d031447_P003	Maize	plastid	68.71	53.28
Zm00001d045269_P004	Maize	plasma membrane	67.84	53.18
TraesCSU01G093100.1	Wheat	plasma membrane	67.84	53.14
Os06t0158900-00	Rice	plasma membrane	67.84	53.07
PGSC0003DMT400074333	Potato	mitochondrion	70.52	52.98
TraesCS7B01G016500.1	Wheat	plasma membrane	67.59	52.94
TraesCS7D01G116300.2	Wheat	plasma membrane	67.59	52.94
KXG19351	Sorghum	plasma membrane	67.59	52.83
GSMUA_Achr6P31980_001	Banana	plasma membrane	58.02	52.58
KXG25638	Sorghum	plasma membrane	66.12	52.32
VIT_02s0025g00930.t01	Wine grape	plasma membrane	63.28	52.32
HORVU7Hr1G024960.12	Barley	golgi	66.64	52.05
KRH08755	Soybean	plasma membrane	67.24	51.9
TraesCS7A01G118900.2	Wheat	plasma membrane	65.52	51.32
PGSC0003DMT400018927	Potato	plasma membrane	55.86	51.31
TraesCS7A01G119000.1	Wheat	plasma membrane	65.86	50.97
TraesCS2B01G150600.1	Wheat	plasma membrane	65.95	50.97
TraesCS2D01G131000.1	Wheat	plastid	65.69	50.83
TraesCS2A01G128500.1	Wheat	plasma membrane	65.26	50.64
VIT_02s0025g00950.t01	Wine grape	plasma membrane	63.97	50.2
VIT_02s0025g00970.t01	Wine grape	plasma membrane	63.97	49.8
HORVU2Hr1G022560.5	Barley	mitochondrion	65.43	49.51
CDY71198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	21.38	49.01
CDX82557	Canola	plasma membrane	20.95	48.41
CDY51899	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.41	47.79
Solyc08g081890.2.1	Tomato	endoplasmic reticulum, nucleus, plasma membrane	60.52	47.46
CDY39771	Canola	endoplasmic reticulum, plasma membrane, vacuole	42.59	46.17
CDX82552	Canola	plasma membrane	45.09	42.49
CDY27531	Canola	plasma membrane	47.41	38.73
CDY37305	Canola	plasma membrane	47.24	38.59
CDY06441	Canola	plasma membrane	47.76	37.82
CDY64080	Canola	plasma membrane	40.86	36.16
CDX98408	Canola	plasma membrane	40.78	36.02
CDY23680	Canola	plasma membrane	41.29	35.72
CDX89842	Canola	plasma membrane	46.12	35.48
CDY18207	Canola	plasma membrane	46.12	35.45
CDY63884	Canola	plasma membrane	37.33	35.17
CDY03309	Canola	golgi	43.02	34.77
CDY43395	Canola	plasma membrane	43.71	34.61
CDX76656	Canola	plasma membrane, plastid	42.16	33.06
CDY11440	Canola	plastid	41.98	32.79
CDY43277	Canola	plastid	41.81	32.38
CDX93660	Canola	plastid	41.64	31.82
CDY72149	Canola	cytosol, peroxisome, plasma membrane	16.29	30.88
CDY44021	Canola	plastid	42.07	28.16
CDY23565	Canola	plastid	41.98	28.04
CDY01519	Canola	plasma membrane	31.81	25.79
CDX98202	Canola	plasma membrane	31.98	25.43
CDY09589	Canola	plasma membrane	32.59	25.32
CDX84290	Canola	plasma membrane	34.91	24.86
CDY31633	Canola	plasma membrane	34.83	24.85
CDY12054	Canola	plasma membrane	34.22	24.46
CDY02289	Canola	plasma membrane	34.14	24.4
CDX90247	Canola	plasma membrane	34.14	24.38
CDY09591	Canola	plasma membrane	34.05	24.32
CDY02290	Canola	plasma membrane	32.59	23.41
CDX77595	Canola	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	GO:A0A078C4H6	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDX71911	ProteinID:CDX71911	ProteinID:CDX71911.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00155656001	InterPro:IPR003439	InterPro:IPR011527
InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893
PFscan:PS50929	PANTHER:PTHR24223	PANTHER:PTHR24223:SF192	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123
TMHMM:TMhelix	UniParc:UPI0004EDC159	SEG:seg	:	:	:

Description

BnaC08g29630D

Coordinates

chrLK031795:+:1212404..1217821

Molecular Weight (calculated)

128888.0 Da

IEP (calculated)

8.434

GRAVY (calculated)

0.148

Length

1160 amino acids

Sequence
(BLAST)

0001: MKIVSVSSGP LLLNAFILVA EGNERFRYEG LVLAVSLFIA KSVESLSQRQ WYFRSRLVGL RVRSLLTAAI YKKQLRLNTS SRLIHSGSEI MNYATVDAYR
0101: IGEFPYWFHQ LWTTSFQLLI ALGILFHSVG VATFSALAVI VLTVLCNAPI AKLQNKFQSE LMTAQDERLK ACNESLVNMK VLKLYAWESH FKKVIEKLRN
0201: TELKSLKAVQ MRKAYNAVLF WSSPVLVSAA TFATCYFLNI PLRASNVFTF VATLRLVQDP VRMIPDVIGV TIQAKVAFSR IATFLEAPEL QGGERRRKKR
0301: SGGDQSAIVM KSASFSWEEK GSTKPNLRNV SLEVKFGEKV AVCGEVGSGK STLLAAILGE TPCVSGTIDF YGTIAYVSQT AWIQTGTIRE NILFGGVMDE
0401: HRYRGTVKKS CLDKDLELLP DGDQTEIGER GVNLSGGQKQ RIQLARALYQ DADIYLLDDP FSAVDAHTAT SLFKEYVMDA LAGKAVLLVT HQVDFLPAFD
0501: SVLLMSDGEV TEADTYQELL ARSKDFQELV NAHRETAGSE RVFAVENPSK PVKEIKKVPS SYTQSNVLKP SRLIKQEVRE KGDTGLKPYI QYLNQNKGYI
0601: FFLIASLAQV MFGLGQILQN SWMAANVENP QVTTLKLILV YLLIGLISVL CLLVRSVCVV VMCMRSSTSL FSHLLNSLFR APMSFYDSTP LGRILSRVSS
0701: DLSIVDLDVP FGLIFVVAST VNTGFSLVVL AVVTWQVLFV SVPMIYLALR LQKYYFQTAK ELMRINGTTK SLVANHLAES VAGAITIRAF DEEERFFKKS
0801: LTLIDTNASP FLHSFAANEW LIQRLETVSA IVLASTAFCM VLLPTGTFSS GFIGMALSYG LSLNMGLVYS VQNQCYLANW IISVERLNQY THLTPEAPEV
0901: IEETRPPVNW PVTGRVEISD LQASQKAPLV LKGISCVFEG GHKIGIVGRT GSGKTTLISA LFRLVEPVGG KIVVDGVDIS KIGVHDLRSR FGIIPQDPTL
1001: FNGTVRYNLD PLCQHTDAEI WEVLGKCQLK EVVKEKENGL DSLVVEDGSN WSMGQRQLFC LGRAVLRRSR VLVLDEATAS IDNATDLILQ KTIRREFSDC
1101: TVITVAHRIP TVMDCTMVLS ISDGRIVEYD APMKLMENEN SLFGKLVKEY WSHYHSADSH

Best Arabidopsis Sequence Match ( AT3G59140.1 )
(BLAST)

0001: MIENYWTSFC GNHHTSSNCT VRFLQICFGI TLSFLTLCIC LFHKEPPKRI HQFFCLRLVS ALFNGIIGSL DLVLGIWVLR ENHSKPLILW LVILIQGFTW
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR

Arabidopsis Description

ABCC10ABC transporter C family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYS2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.