Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 3
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 90.07 96.84
CDX82557 Canola plasma membrane 88.6 96.02
Zm00001d048327_P001 Maize cytosol 4.78 63.41
CDX82552 Canola plasma membrane 97.06 42.89
TraesCS1A01G310100.1 Wheat cytosol 58.27 42.04
KRH73882 Soybean plasma membrane 79.23 33.36
AT3G13080.1 Thale cress plasma membrane, plastid 92.83 33.36
CDY63884 Canola plasma membrane 72.79 32.17
KXG31741 Sorghum plasma membrane 73.9 32.08
PGSC0003DMT400057099 Potato endoplasmic reticulum, plasma membrane 77.21 31.82
GSMUA_Achr10P... Banana plasma membrane 72.98 30.97
CDY39771 Canola endoplasmic reticulum, plasma membrane, vacuole 60.11 30.56
KRG98556 Soybean nucleus 70.77 29.59
KRG99624 Soybean plasma membrane 80.15 29.3
KRH46626 Soybean plasma membrane 78.68 29.3
KRH01233 Soybean cytosol, endoplasmic reticulum, plasma membrane 69.85 29.1
OQU92792 Sorghum plasma membrane 72.06 28.59
KRH73881 Soybean plasma membrane 78.31 28.53
KRH14256 Soybean plasma membrane 78.31 28.51
HORVU3Hr1G024210.3 Barley vacuole 72.61 27.74
KRH46325 Soybean plasma membrane 75.55 27.47
KRH46324 Soybean plasma membrane 75.37 27.28
TraesCS1D01G309600.1 Wheat peroxisome 63.79 27.02
Zm00001d008733_P001 Maize plasma membrane 73.35 26.64
TraesCS1B01G321200.1 Wheat peroxisome 62.87 26.64
CDY43395 Canola plasma membrane 71.32 26.48
TraesCS3B01G148100.2 Wheat plasma membrane, plastid 72.98 26.47
TraesCS2D01G420400.1 Wheat plasma membrane 62.32 26.42
TraesCS3A01G129000.1 Wheat plastid 72.61 26.4
TraesCS3D01G129900.2 Wheat plasma membrane 72.61 26.39
Os02t0288400-00 Rice plasma membrane 62.32 26.36
TraesCS4B01G253200.1 Wheat plasma membrane 71.51 26.25
Os01t0173900-01 Rice plasma membrane 72.43 26.18
TraesCS3A01G362500.1 Wheat plasma membrane 69.3 26.16
TraesCS4D01G253300.3 Wheat plasma membrane 71.32 26.15
CDY72149 Canola cytosol, peroxisome, plasma membrane 29.41 26.14
KXG40096 Sorghum plasma membrane 72.43 26.08
TraesCS4A01G051100.1 Wheat plasma membrane 71.32 26.08
TraesCS3D01G356300.2 Wheat plasma membrane 69.3 25.63
TraesCS3B01G395000.2 Wheat plasma membrane 68.93 25.55
HORVU3Hr1G085890.7 Barley plasma membrane 68.93 25.53
Zm00001d020666_P004 Maize plasma membrane 61.58 25.44
Zm00001d048329_P003 Maize plasma membrane 70.96 25.41
TraesCS2B01G442400.1 Wheat plasma membrane 58.46 25.2
CDY64080 Canola plasma membrane 59.38 24.64
CDX98408 Canola plasma membrane 59.19 24.52
CDX71911 Canola plasma membrane 47.79 22.41
CDY06021 Canola plasma membrane 47.43 22.16
CDY23565 Canola plastid 70.77 22.16
CDY44021 Canola plastid 70.04 21.98
CDX89842 Canola plasma membrane 60.29 21.75
CDY18207 Canola plasma membrane 60.29 21.74
CDY03309 Canola golgi 53.86 20.42
CDY23680 Canola plasma membrane 49.26 19.99
CDY37305 Canola plasma membrane 49.45 18.94
CDY27531 Canola plasma membrane 49.45 18.94
KRH73880 Soybean plasma membrane 42.1 18.66
VIT_19s0015g00040.t01 Wine grape plasma membrane 36.95 18.65
CDX76656 Canola plasma membrane, plastid 49.45 18.19
CDY11440 Canola plastid 49.26 18.05
CDY06441 Canola plasma membrane 48.53 18.02
CDY43277 Canola plastid 49.45 17.96
CDX93660 Canola plastid 49.08 17.59
CDX98202 Canola plasma membrane 37.13 13.85
CDY31633 Canola plasma membrane 40.07 13.41
CDX84290 Canola plasma membrane 40.07 13.38
CDY01519 Canola plasma membrane 35.11 13.35
CDY09589 Canola plasma membrane 36.58 13.33
CDY12054 Canola plasma membrane 39.52 13.25
CDY02289 Canola plasma membrane 39.34 13.19
CDX90247 Canola plasma membrane 39.34 13.18
CDY09591 Canola plasma membrane 39.34 13.18
CDY02290 Canola plasma membrane 36.76 12.38
CDX77595 Canola extracellular 0.0 0.0
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300GO:A0A078IR23UniProt:A0A078IR23InterPro:AAA+_ATPase
InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeEnsemblPlants:CDY51899ProteinID:CDY51899ProteinID:CDY51899.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00004478001InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24223PANTHER:PTHR24223:SF181SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelix
UniParc:UPI0004EF366B:::::
Description
BnaC03g73620DBnaC03g73620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IR23]
Coordinates
chrLK033038:+:28210..30477
Molecular Weight (calculated)
60548.4 Da
IEP (calculated)
6.514
GRAVY (calculated)
0.128
Length
544 amino acids
Sequence
(BLAST)
001: MAWATPVSKD VEAPVNISTL MIVYVALAVG SSVCILVRTT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMNR ASTDQSAVDL DIPYQFGLVA
101: ITVIQLIGII GVMSQVSWLV FLVFIPVVAA FIWYQRYYIA AARELSRLVG VCKAPLIQHF AETISGSTTI RSFNQESRFR GDNMRLSDGY SRPKFYSAGA
201: REWLGFRLDM LSSLTFAFSL VFLISIPTGV IHPSLAGLAV TYGLNLNTMQ AWLIWTLCNL ENKIISVERM LQYASVPSEP PLVIESNRPE QSWPSRGEVD
301: IHDLQVRYAP HMPLVLRGIT CTFKGGLRTG IVGRTGSGKS TLIQTLFRIV EPSAGEIKID GVNILNIGLH DLRLRLSIIP QDPTMFEGTV RSNLDPLEEY
401: TDDQIWEALD KCQLGDEVRK KEQKLDSSVS ENGENWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS
501: DMVLLLSDGI IEEYDTPVKL LENKSSSFAK LVAEYTARSS SSFE
Best Arabidopsis Sequence Match ( AT3G13080.1 )
(BLAST)
0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQRYYIA AARELSRLVG VCKAPLIQHF SETISGATTI RSFSQEFRFR SDNMRLSDGY SRPKFYTAGA MEWLCFRLDM LSSLTFVFSL VFLVSIPTGV
1201: IDPSLAGLAV TYGLSLNTLQ AWLIWTLCNL ENKIISVERI LQYASVPSEP PLVIESNRPE QSWPSRGEVE IRDLQVRYAP HMPLVLRGIT CTFKGGLRTG
1301: IVGRTGSGKS TLIQTLFRIV EPSAGEIRID GVNILTIGLH DLRLRLSIIP QDPTMFEGTM RSNLDPLEEY TDDQIWEALD KCQLGDEVRK KEQKLDSSVS
1401: ENGDNWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS DMVLLLSNGI IEEYDTPVRL LEDKSSSFSK
1501: LVAEYTSRSS SSFD
Arabidopsis Description
ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.