Factsheet for VIT_19s0015g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73882	Soybean	plasma membrane	72.82	60.76
Zm00001d048327_P001	Maize	cytosol	2.23	58.54
PGSC0003DMT400057099	Potato	endoplasmic reticulum, plasma membrane	70.5	57.58
CDX82552	Canola	plasma membrane	64.56	56.54
KRH73880	Soybean	plasma membrane	62.89	55.26
KRH14256	Soybean	plasma membrane	75.6	54.55
KRH73881	Soybean	plasma membrane	75.51	54.52
KRG99624	Soybean	plasma membrane	74.68	54.1
KRG98556	Soybean	nucleus	65.21	54.04
KRH46626	Soybean	plasma membrane	72.45	53.46
KXG31741	Sorghum	plasma membrane	61.78	53.15
KRH01233	Soybean	cytosol, endoplasmic reticulum, plasma membrane	63.54	52.45
KRH46325	Soybean	plasma membrane	70.04	50.47
KRH46324	Soybean	plasma membrane	70.13	50.3
Bra001490.1-P	Field mustard	plasma membrane	68.92	50.24
Bra001488.1-P	Field mustard	plasma membrane, plastid	68.46	49.43
AT3G13080.1	Thale cress	plasma membrane, plastid	69.39	49.41
OQU92792	Sorghum	plasma membrane	62.43	49.09
Bra039368.1-P	Field mustard	plasma membrane	66.33	48.41
HORVU3Hr1G024210.3	Barley	vacuole	63.45	48.03
Bra034706.1-P	Field mustard	plasma membrane	64.75	47.39
AT3G13100.1	Thale cress	plasma membrane	65.49	47.29
TraesCS1B01G321200.1	Wheat	peroxisome	56.31	47.27
Os02t0288400-00	Rice	plasma membrane	56.12	47.05
TraesCS1D01G309600.1	Wheat	peroxisome	55.94	46.96
GSMUA_Achr10P...	Banana	plasma membrane	55.75	46.88
Os01t0173900-01	Rice	plasma membrane	64.66	46.31
TraesCS2D01G420400.1	Wheat	plasma membrane	55.01	46.22
TraesCS3A01G129000.1	Wheat	plastid	64.01	46.12
TraesCS3D01G129900.2	Wheat	plasma membrane	64.01	46.09
Zm00001d020666_P004	Maize	plasma membrane	56.22	46.01
Zm00001d008733_P001	Maize	plasma membrane	63.91	45.99
TraesCS3B01G148100.2	Wheat	plasma membrane, plastid	63.91	45.93
TraesCS4B01G253200.1	Wheat	plasma membrane	63.08	45.88
TraesCS4D01G253300.3	Wheat	plasma membrane	63.08	45.82
TraesCS4A01G051100.1	Wheat	plasma membrane	62.99	45.63
TraesCS2B01G442400.1	Wheat	plasma membrane	53.34	45.56
CDY43395	Canola	plasma membrane	60.76	44.71
TraesCS3D01G356300.2	Wheat	plasma membrane	60.76	44.53
HORVU3Hr1G085890.7	Barley	plasma membrane	60.67	44.52
Bra039348.1-P	Field mustard	plasma membrane	60.2	44.36
TraesCS3B01G395000.2	Wheat	plasma membrane	60.39	44.35
KXG40096	Sorghum	plasma membrane	61.04	43.55
TraesCS3A01G362500.1	Wheat	plasma membrane	57.61	43.1
Zm00001d048329_P003	Maize	plasma membrane	60.67	43.05
CDY63884	Canola	plasma membrane	47.87	41.92
TraesCS1A01G310100.1	Wheat	cytosol	28.48	40.72
CDY44021	Canola	plastid	61.97	38.55
CDY23565	Canola	plastid	61.69	38.28
CDY51899	Canola	endoplasmic reticulum, plasma membrane, vacuole	18.65	36.95
VIT_15s0021g00220.t01	Wine grape	plasma membrane	51.58	36.82
VIT_07s0005g04460.t01	Wine grape	plastid	50.93	35.84
CDX82557	Canola	plasma membrane	15.86	34.06
CDY71198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	15.96	33.99
VIT_01s0010g02440.t01	Wine grape	mitochondrion	25.32	33.75
VIT_07s0005g00260.t01	Wine grape	plasma membrane	38.13	32.24
VIT_09s0002g02440.t01	Wine grape	plasma membrane	37.76	31.14
VIT_16s0050g02280.t01	Wine grape	cytosol, golgi, plasma membrane	36.83	30.42
VIT_16s0050g02480.t01	Wine grape	plasma membrane	40.26	29.32
VIT_02s0025g00930.t01	Wine grape	plasma membrane	37.29	28.65
VIT_02s0025g00970.t01	Wine grape	plasma membrane	37.66	27.25
VIT_02s0025g00950.t01	Wine grape	plasma membrane	37.11	27.06
VIT_09s0018g00310.t01	Wine grape	plasma membrane	26.44	20.88
VIT_10s0003g04470.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	30.43	20.2
VIT_09s0002g02430.t01	Wine grape	plasma membrane	38.4	14.08

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:CCB61984	ProteinID:CCB61984.1	UniProt:F6I529	EMBL:FN596747
GO:GO:0000166	GO:GO:0000325	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24223	PANTHER:PTHR24223:SF181	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix
UniParc:UPI0002108BC8	ArrayExpress:VIT_19s0015g00040	EnsemblPlantsGene:VIT_19s0015g00040	EnsemblPlants:VIT_19s0015g00040.t01	SEG:seg	:

Description

No Description!

Coordinates

chr19:-:7968064..7973375

Molecular Weight (calculated)

119570.0 Da

IEP (calculated)

7.571

GRAVY (calculated)

0.159

Length

1078 amino acids

Sequence
(BLAST)

0001: MVGLEAMVTY PDIVKKDQSL QVQFLVPDIV YVITGLFLCY SGFLGKNQGK ESILREPLLN GGTSISIVES DESKGEETVT PFSKAGFFSL LTFSWIGPLI
0101: AEGNKKTLDL GDVPQLDTSN SVVAVFPAFR NKLQCDCGGS NGVTTLKLVK ALIFAFWAEI LLTALFLLLD ILASYVGPYL IDTFVQYLNG RREFKNEGYV
0201: LVMVFFLAKL VECLSLRQCS FRLQQVGFRI RAVMITMIYN KGLTLSCQSK QGHTTGEIIN FMSVDAERIG DFIWYMHGPW MVIVQVTLAL LILYKNVGLA
0301: SVAAFFATII VMLANVPLGK WEEKFQGKLM ESKDKRMKAT SEILRNMRIL KLQGWEMKFL SKIVDLRKNE TGWLKKYLYT SAMTTFFFWV APTFVSVVTF
0401: GTCMLIGIPL ESGKILSSLA TFRILQQPIY SLPDLISMIA QTKVSLDRIT SFLRLVDLQS DVIERLPKGS SDTAIEIVDG NFSWDLSSPN PTLKDINLRV
0501: CRGMRVAVCG TVGSGKSSLL SCILGEVPKI SGILKLCGTK AYVAQSPWIQ SGKIEENILF GKEMDRERYE RVLDACSLKK DLEVLSFGDQ TVIGKRGINL
0601: SGGQKQRIQI ARALYQNADI YLFDDPFSAV DAHTGTHLFK ECLLGLLGSK TVIYVTHQVE FLPAADLILV MKDGRITQAG KYNEILNSGT DFMELVGAHK
0701: KALSALNSVE AGSLSEKSSI HEDSDNIGGT SEVIEKEENK GGQNGKAEEI DGPKGQLVQE EEREKGKVGL WVYWKYIRTA YGGALVPFIL LSQILFQLLQ
0801: IGSNYWMAWS SPVSDDVKPA VRGSTLMIVY VALAVGSSFS VLSRAMLLVT ATILFNKMHL SLFRAPMSFF DATPSGRILN RASTDQNAID TNIPMQVGAF
0901: AFSLIRLRGI IAVMSQVAWQ VFIVFIPVIA TCIWYQALDK CQLGDEVRKK EGKLDSTVIE NGENWSMGQR QLVCLGRVLL KKSKVLVPDE ATASVDTATE
1001: NLIQQTLRQH FVDSTVITIA HRTTSVLDSD RVLLLDHGLI EEYDTPTRLL ENKSSSFAKL VAEYTVRLNS SLENAGDI

Best Arabidopsis Sequence Match ( AT3G13080.3 )
(BLAST)

0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQVLFNK LYNLVFHKSC

Arabidopsis Description

ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.