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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 8
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400044938 Potato plasma membrane 94.63 73.76
Os01t0902100-00 Rice plasma membrane 47.67 52.47
KRH42626 Soybean plasma membrane 60.79 47.42
KRH58734 Soybean plasma membrane 60.53 47.31
VIT_01s0010g02440.t01 Wine grape mitochondrion 32.78 45.98
OQU86956 Sorghum plasma membrane 56.3 44.19
TraesCS3D01G387200.1 Wheat plasma membrane 56.39 43.96
TraesCS3B01G425500.1 Wheat cytosol, peroxisome, plasma membrane 56.56 43.88
TraesCS3A01G393500.1 Wheat cytosol, peroxisome, plasma membrane 56.48 43.43
HORVU3Hr1G088900.8 Barley plasma membrane, vacuole 56.65 42.98
GSMUA_Achr11P... Banana golgi 47.05 39.58
GSMUA_Achr5P25430_001 Banana plasma membrane 45.64 38.86
Solyc09g064440.2.1 Tomato plastid 41.32 30.63
Solyc06g036490.1.1 Tomato plastid 29.25 27.83
Solyc10g024420.1.1 Tomato golgi, nucleus, plasma membrane 35.95 27.62
Solyc03g007530.2.1 Tomato plasma membrane 31.89 24.68
Solyc09g075020.2.1 Tomato plastid 32.6 24.45
Solyc01g080640.2.1 Tomato plastid 31.54 23.9
Solyc12g044820.1.1 Tomato plasma membrane 29.87 23.25
Solyc08g081890.2.1 Tomato endoplasmic reticulum, nucleus, plasma membrane 30.22 23.19
Solyc03g117540.2.1 Tomato extracellular 25.55 19.58
Solyc08g006880.2.1 Tomato nucleus 24.32 16.97
Solyc05g014390.2.1 Tomato cytosol 0.53 2.14
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0000325GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005773GO:GO:0005774GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439
InterPro:IPR011527InterPro:IPR036640UniProt:K4BYF7InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664
ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF222SMART:SM00382
SUPFAM:SSF52540SUPFAM:SSF90123EnsemblPlantsGene:Solyc05g014380.2EnsemblPlants:Solyc05g014380.2.1TMHMM:TMhelixUniParc:UPI00027664C5
SEG:seg:::::
Description
No Description!
Coordinates
chr5:+:8239463..8243866
Molecular Weight (calculated)
128903.0 Da
IEP (calculated)
8.734
GRAVY (calculated)
0.148
Length
1135 amino acids
Sequence
(BLAST)
0001: MDITLRLMNV FFFLILLIYF LVDFFKKNGE EDNSFVEKRE NRRKPTFFIK ITVLLNFSIA ISYLGFCVNE FLNLRDFVFE GSVFSVMTWS VAAVIAAHSL
0101: NREKRWPLLL ILWWVFSSVF DIILVSFHLL KHYNIYTKAP HFLPKANIID FASLPLSILL CFNALPLPDN KYNEIQQPFL QKQDEDDDAF SSASIWSLIT
0201: FRWLNPLFNK GREEVKLKVE HIPLIPHTDT SNEASSLLEH ALRQKKASSF SLPDALLRMI WTPLACNAVF AGVNTIASYI GPLLITSFVN FLSEKKDESN
0301: WQQGMMLAFI FFFAKTVESL SQRQWYFGAN RIGVRVRAAL MALIYKRTLS IKYGGTKDGK IINFINVDVE RIGDFCWYIH GVWLLPVQVT FALLILYRNL
0401: GAAPSIAALL STIFVMVSNT PLANMQEQLH SKIMEAKDVR IKATSETLKS MRVLKLHSWE STFLKKLLQL RENERGWLKR YLYTCSAVAF LFWASPTLVS
0501: VVTFGVCIIL KTPLTSGAVL SALATFRILQ EPIYNLPELI SMVAQTKVSV DRIQEFMREE DQKKLTSYNT PNTSEVAIEL EPGEYAWGTN ESKKSTIKIT
0601: EKIRIMKGWK VAICGSVGSG KSSLLCSIMG EIPRISGSSI KINGSKAFVP QSAWIQTGTV RDNVLFGKEM NKARYDDVVE RCALKRDIEM WADGDLNLVG
0701: ERGMNLSGGQ KQRIQLARAI YSDSDIYLLD DPFSAVDAQT GAHMFKKCLI QHLQEKTVVY ATHQLEFLDT SDLILVMKDG RIVQSGKYNK LIADPDGELL
0801: RHMVAHSKSL DQVNPSQKCS CLTKGKHQNN QIEVEECFED LTCDNRILGR TQQEDAVSGR VKWKVYSTFV TSAYKGGLVL PVLLCQVFFQ GLQMASNYWI
0901: TWGTEEEGRV TSERLIGIFV LMSGGSSLFI LGRAVMLSTI AIETAQKLYI GMIKSIFRAP LSFFDSTPSS RILNRSSTDQ SIVDTDIPYR LAGLAFALIQ
1001: LLSIVVLMSN VAWQIFFLFL LILALSMWYQ AYYITTAREL ARMIGIQKAP ILHHFSESLN GVATIRCFNQ EDRFLKKNLS LIDDYSRVVF HNSATMEWLC
1101: VRINFLFNLI FFFLLVILAH LPREAIDPSS FSGDA
Best Arabidopsis Sequence Match ( AT1G04120.1 )
(BLAST)
0001: MDFIEISLIF REHLPLLELC SVIINLLLFL VFLFAVSARQ ILVCVRRGRD RLSKDDTVSA SNLSLEREVN HVSVGFGFNL SLLCCLYVLG VQVLVLVYDG
0101: VKVRREVSDW FVLCFPASQS LAWFVLSFLV LHLKYKSSEK LPFLVRIWWF LAFSICLCTM YVDGRRLAIE GWSRCSSHVV ANLAVTPALG FLCFLAWRGV
0201: SGIQVTRSSS DLQEPLLVEE EAACLKVTPY STAGLVSLIT LSWLDPLLSA GSKRPLELKD IPLLAPRDRA KSSYKVLKSN WKRCKSENPS KPPSLARAIM
0301: KSFWKEAACN AVFAGLNTLV SYVGPYLISY FVDYLGGKEI FPHEGYVLAG IFFTSKLIET VTTRQWYMGV DILGMHVRSA LTAMVYRKGL KLSSIAKQNH
0401: TSGEIVNYMA VDVQRIGDYS WYLHDIWMLP MQIVLALAIL YKSVGIAAVA TLVATIISIL VTIPLAKVQE DYQDKLMTAK DERMRKTSEC LRNMRVLKLQ
0501: AWEDRYRVRL EEMREEEYGW LRKALYSQAF VTFIFWSSPI FVAAVTFATS IFLGTQLTAG GVLSALATFR ILQEPLRNFP DLVSMMAQTK VSLDRISGFL
0601: QEEELQEDAT VVIPRGLSNI AIEIKDGVFC WDPFSSRPTL SGIQMKVEKG MRVAVCGTVG SGKSSFISCI LGEIPKISGE VRICGTTGYV SQSAWIQSGN
0701: IEENILFGSP MEKTKYKNVI QACSLKKDIE LFSHGDQTII GERGINLSGG QKQRVQLARA LYQDADIYLL DDPFSALDAH TGSDLFRDYI LSALAEKTVV
0801: FVTHQVEFLP AADLILVLKE GRIIQSGKYD DLLQAGTDFK ALVSAHHEAI EAMDIPSPSS EDSDENPIRD SLVLHNPKSD VFENDIETLA KEVQEGGSAS
0901: DLKAIKEKKK KAKRSRKKQL VQEEERVKGK VSMKVYLSYM GAAYKGALIP LIILAQAAFQ FLQIASNWWM AWANPQTEGD ESKVDPTLLL IVYTALAFGS
1001: SVFIFVRAAL VATFGLAAAQ KLFLNMLRSV FRAPMSFFDS TPAGRILNRV SIDQSVVDLD IPFRLGGFAS TTIQLCGIVA VMTNVTWQVF LLVVPVAVAC
1101: FWMQKYYMAS SRELVRIVSI QKSPIIHLFG ESIAGAATIR GFGQEKRFIK RNLYLLDCFV RPFFCSIAAI EWLCLRMELL STLVFAFCMV LLVSFPHGTI
1201: DPSMAGLAVT YGLNLNGRLS RWILSFCKLE NKIISIERIY QYSQIVGEAP AIIEDFRPPS SWPATGTIEL VDVKVRYAEN LPTVLHGVSC VFPGGKKIGI
1301: VGRTGSGKST LIQALFRLIE PTAGKITIDN IDISQIGLHD LRSRLGIIPQ DPTLFEGTIR ANLDPLEEHS DDKIWEALDK SQLGDVVRGK DLKLDSPVLE
1401: NGDNWSVGQR QLVSLGRALL KQAKILVLDE ATASVDTATD NLIQKIIRTE FEDCTVCTIA HRIPTVIDSD LVLVLSDGRV AEFDTPARLL EDKSSMFLKL
1501: VTEYSSRSTG IPEL
Arabidopsis Description
ABCC5MRP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGC2]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.